[INFO] cloning repository https://github.com/stela2502/bam_links
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/stela2502/bam_links" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_links", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_links'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 02b7005bc3a322be7a96c08dfe724f14fa515ffa
[INFO] checking stela2502/bam_links/02b7005bc3a322be7a96c08dfe724f14fa515ffa against master#fcac501a73cdde54de46a0683567f1a890730555 for pr-151102
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_links" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/stela2502/bam_links
[INFO] finished tweaking git repo https://github.com/stela2502/bam_links
[INFO] tweaked toml for git repo https://github.com/stela2502/bam_links written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/stela2502/bam_links on toolchain fcac501a73cdde54de46a0683567f1a890730555
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+fcac501a73cdde54de46a0683567f1a890730555" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/stela2502/bam_links already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+fcac501a73cdde54de46a0683567f1a890730555" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded unit-prefix v0.5.2
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded indicatif v0.18.3
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded curl-sys v0.4.84+curl-8.17.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded lzma-sys v0.1.20
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.4+3.5.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+fcac501a73cdde54de46a0683567f1a890730555" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] b61f2e63f4d15a817b0f8e89ab3f28b27cc6b5ef601c93e02e018ca7ddb8460d
[INFO] running `Command { std: "docker" "start" "-a" "b61f2e63f4d15a817b0f8e89ab3f28b27cc6b5ef601c93e02e018ca7ddb8460d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b61f2e63f4d15a817b0f8e89ab3f28b27cc6b5ef601c93e02e018ca7ddb8460d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b61f2e63f4d15a817b0f8e89ab3f28b27cc6b5ef601c93e02e018ca7ddb8460d", kill_on_drop: false }`
[INFO] [stdout] b61f2e63f4d15a817b0f8e89ab3f28b27cc6b5ef601c93e02e018ca7ddb8460d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+fcac501a73cdde54de46a0683567f1a890730555" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 16279822e37ffdcba32f76331ff0835de4c8fe091cdfb48fb511e4f70047a42d
[INFO] running `Command { std: "docker" "start" "-a" "16279822e37ffdcba32f76331ff0835de4c8fe091cdfb48fb511e4f70047a42d", kill_on_drop: false }`
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling icu_properties_data v2.1.1
[INFO] [stderr]    Compiling regex-syntax v0.8.8
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]     Checking percent-encoding v2.3.2
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking unicode-width v0.2.2
[INFO] [stderr]     Checking form_urlencoded v1.2.2
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]     Checking icu_normalizer v2.1.1
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking clap_lex v0.7.6
[INFO] [stderr]     Checking console v0.16.1
[INFO] [stderr]    Compiling clap_derive v4.5.49
[INFO] [stderr]     Checking clap_builder v4.5.53
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking icu_properties v2.1.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling cc v1.2.48
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]     Checking indicatif v0.18.3
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]    Compiling openssl-src v300.5.4+3.5.4
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]    Compiling libz-sys v1.1.23
[INFO] [stderr]    Compiling openssl-sys v0.9.111
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.84+curl-8.17.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]     Checking url v2.5.7
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]     Checking clap v4.5.53
[INFO] [stderr]    Compiling regex v1.12.2
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking rust-htslib v0.49.0
[INFO] [stderr]     Checking bam_links v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused variable: `header_view`
[INFO] [stdout]   --> src/main.rs:40:9
[INFO] [stdout]    |
[INFO] [stdout] 40 |     let header_view = bam.header().clone();  // for tid2name()
[INFO] [stdout]    |         ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_header_view`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `header_view`
[INFO] [stdout]   --> src/main.rs:40:9
[INFO] [stdout]    |
[INFO] [stdout] 40 |     let header_view = bam.header().clone();  // for tid2name()
[INFO] [stdout]    |         ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_header_view`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 40s
[INFO] running `Command { std: "docker" "inspect" "16279822e37ffdcba32f76331ff0835de4c8fe091cdfb48fb511e4f70047a42d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "16279822e37ffdcba32f76331ff0835de4c8fe091cdfb48fb511e4f70047a42d", kill_on_drop: false }`
[INFO] [stdout] 16279822e37ffdcba32f76331ff0835de4c8fe091cdfb48fb511e4f70047a42d
