[INFO] cloning repository https://github.com/cyanea-io/labs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/cyanea-io/labs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcyanea-io%2Flabs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcyanea-io%2Flabs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 0898378e1eca5c4d13dce43348516e8171395d3e [INFO] testing cyanea-io/labs against master#d933cf483edf1605142ac6899ff32536c0ad8b22 for pr-150933 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcyanea-io%2Flabs" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-2-tc1/source/rust-toolchain.toml [INFO] started tweaking git repo https://github.com/cyanea-io/labs [INFO] finished tweaking git repo https://github.com/cyanea-io/labs [INFO] tweaked toml for git repo https://github.com/cyanea-io/labs written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/cyanea-io/labs on toolchain d933cf483edf1605142ac6899ff32536c0ad8b22 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d933cf483edf1605142ac6899ff32536c0ad8b22" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/cyanea-io/labs already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d933cf483edf1605142ac6899ff32536c0ad8b22" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rusty-fork v0.3.1 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded hdf5-derive v0.8.1 [INFO] [stderr] Downloaded tagptr v0.2.0 [INFO] [stderr] Downloaded hdf5-types v0.8.1 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded monostate-impl v0.1.18 [INFO] [stderr] Downloaded unsafe_cell_slice v0.2.2 [INFO] [stderr] Downloaded getset v0.1.6 [INFO] [stderr] Downloaded noodles-bgzf v0.34.0 [INFO] [stderr] Downloaded arrow-arith v54.3.1 [INFO] [stderr] Downloaded arrow-ord v54.3.1 [INFO] [stderr] Downloaded wgpu-types v24.0.0 [INFO] [stderr] Downloaded arrow v54.3.1 [INFO] [stderr] Downloaded noodles-sam v0.67.0 [INFO] [stderr] Downloaded noodles-cram v0.72.0 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded wgpu v24.0.5 [INFO] [stderr] Downloaded clap_builder v4.5.57 [INFO] [stderr] Downloaded noodles-vcf v0.70.0 [INFO] [stderr] Downloaded moka v0.12.13 [INFO] [stderr] Downloaded arrow-array 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flatbuffers v24.12.23 [INFO] [stderr] Downloaded pyo3 v0.23.5 [INFO] [stderr] Downloaded hdf5-sys v0.8.1 [INFO] [stderr] Downloaded inventory v0.3.21 [INFO] [stderr] Downloaded memmap2 v0.9.9 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded multimap v0.10.1 [INFO] [stderr] Downloaded monostate v0.1.18 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded rayon_iter_concurrent_limit v0.2.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded bytecount v0.6.9 [INFO] [stderr] Downloaded core-graphics-types v0.2.0 [INFO] [stderr] Downloaded is-terminal v0.4.17 [INFO] [stderr] Downloaded metal v0.31.0 [INFO] [stderr] Downloaded metal v0.33.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:cfa559dde23f44738f9990739aaa3487d8df3af37eb5df0572f7cf76004a604a" "/opt/rustwide/cargo-home/bin/cargo" "+d933cf483edf1605142ac6899ff32536c0ad8b22" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e37bbe7ce93c54d727f077bd89ad0f9958fe479ebaaf5a1ad4c9efcaa628ecbd [INFO] running `Command { std: "docker" "start" "-a" "e37bbe7ce93c54d727f077bd89ad0f9958fe479ebaaf5a1ad4c9efcaa628ecbd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e37bbe7ce93c54d727f077bd89ad0f9958fe479ebaaf5a1ad4c9efcaa628ecbd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e37bbe7ce93c54d727f077bd89ad0f9958fe479ebaaf5a1ad4c9efcaa628ecbd", kill_on_drop: false }` [INFO] [stdout] e37bbe7ce93c54d727f077bd89ad0f9958fe479ebaaf5a1ad4c9efcaa628ecbd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:cfa559dde23f44738f9990739aaa3487d8df3af37eb5df0572f7cf76004a604a" "/opt/rustwide/cargo-home/bin/cargo" "+d933cf483edf1605142ac6899ff32536c0ad8b22" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 36d66b63c94e0a9b79eafe3d01d67b0e9d5baaddcb78c262734535e3d466e517 [INFO] running `Command { std: "docker" "start" "-a" "36d66b63c94e0a9b79eafe3d01d67b0e9d5baaddcb78c262734535e3d466e517", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling quote v1.0.44 [INFO] [stderr] Compiling unicode-ident v1.0.22 [INFO] [stderr] Compiling libc v0.2.180 [INFO] [stderr] Compiling cfg-if v1.0.4 [INFO] [stderr] Compiling find-msvc-tools v0.1.9 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling typenum v1.19.0 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling libm v0.2.16 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling simd-adler32 v0.3.8 [INFO] [stderr] Compiling memchr v2.7.6 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling zerocopy v0.8.39 [INFO] [stderr] Compiling pyo3-build-config v0.23.5 [INFO] [stderr] Compiling zmij v1.0.19 [INFO] [stderr] Compiling itoa v1.0.17 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling bytemuck v1.25.0 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ryu v1.0.22 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling regex-syntax v0.8.9 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling buffer-redux v1.1.0 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling syn v2.0.114 [INFO] [stderr] Compiling flate2 v1.1.9 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling memmap2 v0.9.9 [INFO] [stderr] Compiling getrandom v0.2.17 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Compiling cc v1.2.55 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling hashbrown v0.16.1 [INFO] [stderr] Compiling anstyle v1.0.13 [INFO] [stderr] Compiling clap_lex v0.7.7 [INFO] [stderr] Compiling plotters-backend v0.3.7 [INFO] [stderr] Compiling ciborium-io v0.2.2 [INFO] [stderr] Compiling anyhow v1.0.101 [INFO] [stderr] Compiling clap_builder v4.5.57 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling plotters-svg v0.3.7 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling block-buffer v0.10.4 [INFO] [stderr] Compiling crypto-common v0.1.7 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling pyo3-macros-backend v0.23.5 [INFO] [stderr] Compiling pyo3-ffi v0.23.5 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling sha2 v0.10.9 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling indexmap v2.13.0 [INFO] [stderr] Compiling pyo3 v0.23.5 [INFO] [stderr] Compiling cast v0.3.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling plotters v0.3.7 [INFO] [stderr] Compiling ordered-float v5.1.0 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling simba v0.9.1 [INFO] [stderr] Compiling petgraph v0.8.3 [INFO] [stderr] Compiling criterion-plot v0.5.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling is-terminal v0.4.17 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling oorandom v11.1.5 [INFO] [stderr] Compiling anes v0.1.6 [INFO] [stderr] Compiling clap v4.5.57 [INFO] [stderr] Compiling indoc v2.0.7 [INFO] [stderr] Compiling unindent v0.2.4 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling zerocopy-derive v0.8.39 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling getset v0.1.6 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling pyo3-macros v0.23.5 [INFO] [stderr] Compiling cyanea-core v0.1.0 (/opt/rustwide/workdir/cyanea-core) [INFO] [stderr] Compiling multimap v0.10.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling cyanea-ml v0.1.0 (/opt/rustwide/workdir/cyanea-ml) [INFO] [stderr] Compiling cyanea-stats v0.1.0 (/opt/rustwide/workdir/cyanea-stats) [INFO] [stderr] Compiling cyanea-align v0.1.0 (/opt/rustwide/workdir/cyanea-align) [INFO] [stderr] Compiling cyanea-seq v0.1.0 (/opt/rustwide/workdir/cyanea-seq) [INFO] [stderr] Compiling cyanea-struct v0.1.0 (/opt/rustwide/workdir/cyanea-struct) [INFO] [stderr] Compiling cyanea-chem v0.1.0 (/opt/rustwide/workdir/cyanea-chem) [INFO] [stderr] Compiling cyanea-gpu v0.1.0 (/opt/rustwide/workdir/cyanea-gpu) [INFO] [stderr] Compiling cyanea-phylo v0.1.0 (/opt/rustwide/workdir/cyanea-phylo) [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m128i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:371:21 [INFO] [stdout] | [INFO] [stdout] 371 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m256i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:501:21 [INFO] [stdout] | [INFO] [stdout] 501 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling cyanea-omics v0.1.0 (/opt/rustwide/workdir/cyanea-omics) [INFO] [stdout] warning: unused import: `crate::sparse::SparseMatrix` [INFO] [stdout] --> cyanea-omics/src/sc_preprocess.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use crate::sparse::SparseMatrix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `MatrixData` [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:7:47 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::single_cell::{AnnData, ColumnData, MatrixData}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::sparse::SparseMatrix` [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::sparse::SparseMatrix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling half v2.7.1 [INFO] [stderr] Compiling ciborium-ll v0.2.2 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling criterion v0.5.1 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stdout] warning: variable `info_11` is assigned to, but never used [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:335:9 [INFO] [stdout] | [INFO] [stdout] 335 | let mut info_11 = 0.0; // (1,1) element of X^T W X [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: consider using `_info_11` instead [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `info_11` is never read [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:340:9 [INFO] [stdout] | [INFO] [stdout] 340 | info_11 += w * x[i * 2 + 1] * x[i * 2 + 1]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling cyanea-io v0.1.0 (/opt/rustwide/workdir/cyanea-io) [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/bedgraph.rs:12:12 [INFO] [stdout] | [INFO] [stdout] 12 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:16:12 [INFO] [stdout] | [INFO] [stdout] 16 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:45:12 [INFO] [stdout] | [INFO] [stdout] 45 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:57:12 [INFO] [stdout] | [INFO] [stdout] 57 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:71:12 [INFO] [stdout] | [INFO] [stdout] 71 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:11:12 [INFO] [stdout] | [INFO] [stdout] 11 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:39:12 [INFO] [stdout] | [INFO] [stdout] 39 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:55:12 [INFO] [stdout] | [INFO] [stdout] 55 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:14:12 [INFO] [stdout] | [INFO] [stdout] 14 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:30:12 [INFO] [stdout] | [INFO] [stdout] 30 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:314:12 [INFO] [stdout] | [INFO] [stdout] 314 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:326:12 [INFO] [stdout] | [INFO] [stdout] 326 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling cyanea-wasm v0.1.0 (/opt/rustwide/workdir/cyanea-wasm) [INFO] [stderr] Compiling cyanea-py v0.1.0 (/opt/rustwide/workdir/cyanea-py) [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling bio v3.0.0 [INFO] [stderr] Compiling cyanea-benchmarks v0.1.0 (/opt/rustwide/workdir/benchmarks) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 40s [INFO] running `Command { std: "docker" "inspect" "36d66b63c94e0a9b79eafe3d01d67b0e9d5baaddcb78c262734535e3d466e517", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "36d66b63c94e0a9b79eafe3d01d67b0e9d5baaddcb78c262734535e3d466e517", kill_on_drop: false }` [INFO] [stdout] 36d66b63c94e0a9b79eafe3d01d67b0e9d5baaddcb78c262734535e3d466e517 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:cfa559dde23f44738f9990739aaa3487d8df3af37eb5df0572f7cf76004a604a" "/opt/rustwide/cargo-home/bin/cargo" "+d933cf483edf1605142ac6899ff32536c0ad8b22" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 285e331bcfac3b0b69c1c745330099428ef92bdb9cdc2310d79dde7014db0e17 [INFO] running `Command { std: "docker" "start" "-a" "285e331bcfac3b0b69c1c745330099428ef92bdb9cdc2310d79dde7014db0e17", kill_on_drop: false }` [INFO] [stderr] Compiling getrandom v0.3.4 [INFO] [stderr] Compiling rustix v1.1.3 [INFO] [stderr] Compiling linux-raw-sys v0.11.0 [INFO] [stderr] Compiling bitflags v2.10.0 [INFO] [stderr] Compiling fastrand v2.3.0 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling wait-timeout v0.2.1 [INFO] [stdout] warning: unused import: `crate::sparse::SparseMatrix` [INFO] [stdout] --> cyanea-omics/src/sc_preprocess.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use crate::sparse::SparseMatrix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `MatrixData` [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:7:47 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::single_cell::{AnnData, ColumnData, MatrixData}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::sparse::SparseMatrix` [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::sparse::SparseMatrix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `info_11` is assigned to, but never used [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:335:9 [INFO] [stdout] | [INFO] [stdout] 335 | let mut info_11 = 0.0; // (1,1) element of X^T W X [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: consider using `_info_11` instead [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `info_11` is never read [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:340:9 [INFO] [stdout] | [INFO] [stdout] 340 | info_11 += w * x[i * 2 + 1] * x[i * 2 + 1]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m128i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:371:21 [INFO] [stdout] | [INFO] [stdout] 371 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m256i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:501:21 [INFO] [stdout] | [INFO] [stdout] 501 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/bedgraph.rs:12:12 [INFO] [stdout] | [INFO] [stdout] 12 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:16:12 [INFO] [stdout] | [INFO] [stdout] 16 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:45:12 [INFO] [stdout] | [INFO] [stdout] 45 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:57:12 [INFO] [stdout] | [INFO] [stdout] 57 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:71:12 [INFO] [stdout] | [INFO] [stdout] 71 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:11:12 [INFO] [stdout] | [INFO] [stdout] 11 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:39:12 [INFO] [stdout] | [INFO] [stdout] 39 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:55:12 [INFO] [stdout] | [INFO] [stdout] 55 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:14:12 [INFO] [stdout] | [INFO] [stdout] 14 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:30:12 [INFO] [stdout] | [INFO] [stdout] 30 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:314:12 [INFO] [stdout] | [INFO] [stdout] 314 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:326:12 [INFO] [stdout] | [INFO] [stdout] 326 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling cyanea-wasm v0.1.0 (/opt/rustwide/workdir/cyanea-wasm) [INFO] [stderr] Compiling cyanea-ml v0.1.0 (/opt/rustwide/workdir/cyanea-ml) [INFO] [stderr] Compiling cyanea-struct v0.1.0 (/opt/rustwide/workdir/cyanea-struct) [INFO] [stderr] Compiling cyanea-gpu v0.1.0 (/opt/rustwide/workdir/cyanea-gpu) [INFO] [stderr] Compiling cyanea-py v0.1.0 (/opt/rustwide/workdir/cyanea-py) [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling rand_core v0.9.5 [INFO] [stderr] Compiling bio v3.0.0 [INFO] [stderr] Compiling rand v0.9.2 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling rand_xorshift v0.4.0 [INFO] [stderr] Compiling tempfile v3.24.0 [INFO] [stderr] Compiling rusty-fork v0.3.1 [INFO] [stderr] Compiling proptest v1.10.0 [INFO] [stderr] Compiling cyanea-core v0.1.0 (/opt/rustwide/workdir/cyanea-core) [INFO] [stderr] Compiling cyanea-omics v0.1.0 (/opt/rustwide/workdir/cyanea-omics) [INFO] [stderr] Compiling cyanea-io v0.1.0 (/opt/rustwide/workdir/cyanea-io) [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/bedgraph.rs:12:12 [INFO] [stdout] | [INFO] [stdout] 12 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:16:12 [INFO] [stdout] | [INFO] [stdout] 16 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:45:12 [INFO] [stdout] | [INFO] [stdout] 45 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:57:12 [INFO] [stdout] | [INFO] [stdout] 57 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/gfa.rs:71:12 [INFO] [stdout] | [INFO] [stdout] 71 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:11:12 [INFO] [stdout] | [INFO] [stdout] 11 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:29:12 [INFO] [stdout] | [INFO] [stdout] 29 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:39:12 [INFO] [stdout] | [INFO] [stdout] 39 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/blast_xml.rs:55:12 [INFO] [stdout] | [INFO] [stdout] 55 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:14:12 [INFO] [stdout] | [INFO] [stdout] 14 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/abi.rs:30:12 [INFO] [stdout] | [INFO] [stdout] 30 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:314:12 [INFO] [stdout] | [INFO] [stdout] 314 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unexpected `cfg` condition value: `serde` [INFO] [stdout] --> cyanea-io/src/fetch.rs:326:12 [INFO] [stdout] | [INFO] [stdout] 326 | #[cfg_attr(feature = "serde", derive(serde::Serialize, serde::Deserialize))] [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: expected values for `feature` are: `abi`, `bam`, `bcf`, `bed`, `bedgraph`, `bigwig`, `blast`, `blast-xml`, `clustal`, `cram`, `csv`, `default`, `embl`, `fetch`, `genbank`, `gfa`, `gff`, `gtf`, `indexed`, `indexed-bam`, `indexed-vcf`, `maf`, `parallel`, `parquet`, `phylip`, `pir`, `sam`, `stockholm`, `variant-calling`, `vcf`, and `wasm` [INFO] [stdout] = help: consider adding `serde` as a feature in `Cargo.toml` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::sparse::SparseMatrix` [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::sparse::SparseMatrix; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `codon_pos_0based` [INFO] [stdout] --> cyanea-omics/src/variant_annotation.rs:1273:13 [INFO] [stdout] | [INFO] [stdout] 1273 | let codon_pos_0based = 100u64; [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_codon_pos_0based` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling cyanea-benchmarks v0.1.0 (/opt/rustwide/workdir/benchmarks) [INFO] [stderr] Compiling cyanea-seq v0.1.0 (/opt/rustwide/workdir/cyanea-seq) [INFO] [stderr] Compiling cyanea-chem v0.1.0 (/opt/rustwide/workdir/cyanea-chem) [INFO] [stderr] Compiling cyanea-align v0.1.0 (/opt/rustwide/workdir/cyanea-align) [INFO] [stderr] Compiling cyanea-stats v0.1.0 (/opt/rustwide/workdir/cyanea-stats) [INFO] [stderr] Compiling cyanea-phylo v0.1.0 (/opt/rustwide/workdir/cyanea-phylo) [INFO] [stdout] warning: unused variable: `n_dims` [INFO] [stdout] --> cyanea-omics/src/sc_cluster.rs:539:42 [INFO] [stdout] | [INFO] [stdout] 539 | fn make_adata_with_pca(n_obs: usize, n_dims: usize, data: Vec>) -> AnnData { [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_dims` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `info_11` is assigned to, but never used [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:335:9 [INFO] [stdout] | [INFO] [stdout] 335 | let mut info_11 = 0.0; // (1,1) element of X^T W X [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: consider using `_info_11` instead [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `info_11` is never read [INFO] [stdout] --> cyanea-omics/src/sc_markers.rs:340:9 [INFO] [stdout] | [INFO] [stdout] 340 | info_11 += w * x[i * 2 + 1] * x[i * 2 + 1]; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> cyanea-omics/src/sc_integrate.rs:964:13 [INFO] [stdout] | [INFO] [stdout] 964 | let mut data = vec![vec![1.0, 2.0]; 5]; [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m128i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:371:21 [INFO] [stdout] | [INFO] [stdout] 371 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: useless assignment of variable of type `std::arch::x86_64::__m256i` to itself [INFO] [stdout] --> cyanea-align/src/simd_sw.rs:501:21 [INFO] [stdout] | [INFO] [stdout] 501 | vf = vf; [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `cyanea-omics` (lib test); 6 warnings emitted [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/d933cf483edf1605142ac6899ff32536c0ad8b22/bin/rustc --crate-name cyanea_omics --edition=2021 cyanea-omics/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --test --cfg 'feature="default"' --cfg 'feature="serde"' --cfg 'feature="single-cell"' --cfg 'feature="std"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("default", "h5ad", "serde", "single-cell", "std", "wasm", "zarr"))' -C metadata=14045bd4b48ecf9a -C extra-filename=-e6c6929d5354c834 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern cyanea_core=/opt/rustwide/target/debug/deps/libcyanea_core-9f0c3f200717b1cb.rlib --extern cyanea_ml=/opt/rustwide/target/debug/deps/libcyanea_ml-18b9e46a4699b048.rlib --extern cyanea_stats=/opt/rustwide/target/debug/deps/libcyanea_stats-06517f4e10b09421.rlib --extern serde=/opt/rustwide/target/debug/deps/libserde-303bc9abaacd88dd.rlib --extern tempfile=/opt/rustwide/target/debug/deps/libtempfile-8cf575d90a6fa24f.rlib --cap-lints=forbid -L native=/opt/rustwide/target/debug/build/zstd-sys-33efcaec7ecfc7ed/out` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `cyanea-py` (lib test) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/d933cf483edf1605142ac6899ff32536c0ad8b22/bin/rustc --crate-name cyanea --edition=2021 cyanea-py/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --test --cfg 'feature="default"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("default", "h5ad", "numpy"))' -C metadata=d5ca6e31a85d53fa -C extra-filename=-bcfcbeaa5ad094f4 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern cyanea_align=/opt/rustwide/target/debug/deps/libcyanea_align-4aff632a2ec8a6ba.rlib --extern cyanea_chem=/opt/rustwide/target/debug/deps/libcyanea_chem-0dae3f5aec82af4c.rlib --extern cyanea_core=/opt/rustwide/target/debug/deps/libcyanea_core-9f0c3f200717b1cb.rlib --extern cyanea_io=/opt/rustwide/target/debug/deps/libcyanea_io-ed5e03b4bbf4d7ab.rlib --extern cyanea_ml=/opt/rustwide/target/debug/deps/libcyanea_ml-18b9e46a4699b048.rlib --extern cyanea_omics=/opt/rustwide/target/debug/deps/libcyanea_omics-2f82d4761f514149.rlib --extern cyanea_phylo=/opt/rustwide/target/debug/deps/libcyanea_phylo-3a86a8968651b249.rlib --extern cyanea_seq=/opt/rustwide/target/debug/deps/libcyanea_seq-8cfa272d140db335.rlib --extern cyanea_stats=/opt/rustwide/target/debug/deps/libcyanea_stats-06517f4e10b09421.rlib --extern cyanea_struct=/opt/rustwide/target/debug/deps/libcyanea_struct-917baa48ecadebf3.rlib --extern pyo3=/opt/rustwide/target/debug/deps/libpyo3-a3aafb6a8c113d3c.rlib --cap-lints=forbid -L native=/opt/rustwide/target/debug/build/zstd-sys-33efcaec7ecfc7ed/out -L native=/opt/rustwide/target/debug/build/bzip2-sys-88f801f512e5b890/out/lib -L native=/usr/lib/x86_64-linux-gnu` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "285e331bcfac3b0b69c1c745330099428ef92bdb9cdc2310d79dde7014db0e17", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "285e331bcfac3b0b69c1c745330099428ef92bdb9cdc2310d79dde7014db0e17", kill_on_drop: false }` [INFO] [stdout] 285e331bcfac3b0b69c1c745330099428ef92bdb9cdc2310d79dde7014db0e17