[INFO] fetching crate gsearch 0.1.5... [INFO] checking gsearch-0.1.5 against try#66388cc165a6c4ac98c074dc9f0281ff23528c55 for pr-150727 [INFO] extracting crate gsearch 0.1.5 into /workspace/builds/worker-3-tc2/source [INFO] started tweaking crates.io crate gsearch 0.1.5 [INFO] finished tweaking crates.io crate gsearch 0.1.5 [INFO] tweaked toml for crates.io crate gsearch 0.1.5 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate gsearch 0.1.5 on toolchain 66388cc165a6c4ac98c074dc9f0281ff23528c55 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+66388cc165a6c4ac98c074dc9f0281ff23528c55" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gsearch 0.1.5 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+66388cc165a6c4ac98c074dc9f0281ff23528c55" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+66388cc165a6c4ac98c074dc9f0281ff23528c55" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 002c13441e59903a78b618f45a1f53c8601624db34a12068fc925582393a4bf1 [INFO] running `Command { std: "docker" "start" "-a" "002c13441e59903a78b618f45a1f53c8601624db34a12068fc925582393a4bf1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "002c13441e59903a78b618f45a1f53c8601624db34a12068fc925582393a4bf1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "002c13441e59903a78b618f45a1f53c8601624db34a12068fc925582393a4bf1", kill_on_drop: false }` [INFO] [stdout] 002c13441e59903a78b618f45a1f53c8601624db34a12068fc925582393a4bf1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+66388cc165a6c4ac98c074dc9f0281ff23528c55" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7feea55000836f5c4b27ee7cae9065a8760f7ad1fea2be475b8b323693001121 [INFO] running `Command { std: "docker" "start" "-a" "7feea55000836f5c4b27ee7cae9065a8760f7ad1fea2be475b8b323693001121", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling serde v1.0.217 [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling syn v2.0.96 [INFO] [stderr] Checking bytemuck v1.21.0 [INFO] [stderr] Compiling cc v1.2.8 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Checking log v0.4.24 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Checking miniz_oxide v0.8.2 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling serde_json v1.0.135 [INFO] [stderr] Checking flate2 v1.0.35 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking wide v0.7.32 [INFO] [stderr] Checking humantime v2.1.0 [INFO] [stderr] Compiling slog v2.7.0 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking num-bigint v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking is-terminal v0.4.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking indexmap v2.7.0 [INFO] [stderr] Compiling time-macros v0.2.19 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking dirs-sys-next v0.1.2 [INFO] [stderr] Checking crossbeam-channel v0.5.14 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling ryu v1.0.18 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Checking dirs-next v2.0.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking getrandom v0.1.16 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Compiling proc-macro2-diagnostics v0.10.1 [INFO] [stderr] Checking buffer-redux v1.0.2 [INFO] [stderr] Compiling slog-async v2.8.0 [INFO] [stderr] Checking combine v4.6.7 [INFO] [stderr] Checking chrono v0.4.39 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling codepage-437 v0.1.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking time v0.3.37 [INFO] [stderr] Checking term v0.7.0 [INFO] [stderr] Checking crypto-common v0.1.6 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking env_logger v0.10.2 [INFO] [stderr] Checking num-iter v0.1.45 [INFO] [stderr] Compiling camino v1.1.9 [INFO] [stderr] Checking bitflags v2.7.0 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking take_mut v0.2.2 [INFO] [stderr] Checking nix v0.26.4 [INFO] [stderr] Checking form_urlencoded v1.2.1 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking slog-term v2.9.1 [INFO] [stderr] Checking simba v0.9.0 [INFO] [stderr] Compiling synstructure v0.13.1 [INFO] [stderr] Checking simba v0.8.1 [INFO] [stderr] Checking num_cpus v1.16.0 [INFO] [stderr] Checking cpu-time v1.0.0 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Checking instant v0.1.13 [INFO] [stderr] Checking cpufeatures v0.2.16 [INFO] [stderr] Checking trilean v1.1.0 [INFO] [stderr] Compiling az v1.2.1 [INFO] [stderr] Compiling serde_derive v1.0.217 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Checking zerocopy v0.7.35 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling zerofrom-derive v0.1.5 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Checking ppv-lite86 v0.2.20 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling enum-as-inner v0.6.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking ahash v0.8.11 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Checking zerofrom v0.1.5 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Checking sysctl v0.5.5 [INFO] [stderr] Checking sha1_smol v1.0.1 [INFO] [stderr] Checking yoke v0.7.5 [INFO] [stderr] Checking sha1 v0.6.1 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking zerovec v0.10.4 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking mmap-rs v0.6.1 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Compiling ouroboros_macro v0.18.5 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling typed-builder-macro v0.18.2 [INFO] [stderr] Compiling async-trait v0.1.85 [INFO] [stderr] Checking clap_builder v4.5.26 [INFO] [stderr] Checking tinystr v0.7.6 [INFO] [stderr] Checking icu_locid v1.5.0 [INFO] [stderr] Checking icu_collections v1.5.0 [INFO] [stderr] Checking gcollections v1.5.0 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking buf_redux v0.8.4 [INFO] [stderr] Compiling heck v0.3.3 [INFO] [stderr] Checking sha2 v0.10.8 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Compiling katexit v0.1.4 [INFO] [stderr] Checking icu_provider v1.5.0 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Checking num v0.4.3 [INFO] [stderr] Checking needletail v0.5.1 [INFO] [stderr] Checking special v0.8.1 [INFO] [stderr] Checking thread-id v3.3.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking succinct v0.4.4 [INFO] [stderr] Checking icu_locid_transform v1.5.0 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking env_filter v0.1.3 [INFO] [stderr] Checking crossbeam-queue v0.3.12 [INFO] [stderr] Compiling sourmash v0.15.2 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking binary-merge v0.1.2 [INFO] [stderr] Checking random v0.12.2 [INFO] [stderr] Checking murmur3 v0.5.2 [INFO] [stderr] Checking scoped_threadpool v0.1.9 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking bytesize v1.3.0 [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Checking bit-vec v0.5.1 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking aliasable v0.1.3 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Checking icu_properties v1.5.1 [INFO] [stderr] Checking sorted-iter v0.1.11 [INFO] [stderr] Checking bit-vec v0.4.4 [INFO] [stderr] Checking partitions v0.2.4 [INFO] [stderr] Compiling enum_dispatch v0.3.13 [INFO] [stderr] Checking clap v3.2.25 [INFO] [stderr] Checking bloom v0.3.2 [INFO] [stderr] Checking ouroboros v0.18.5 [INFO] [stderr] Checking systemstat v0.1.12 [INFO] [stderr] Checking wavelet-matrix v0.4.7 [INFO] [stderr] Checking hdrhistogram v7.5.4 [INFO] [stderr] Checking probability v0.15.12 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Checking rand_xoshiro v0.6.0 [INFO] [stderr] Checking parking_lot v0.12.3 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking clap v2.34.0 [INFO] [stderr] Checking inplace-vec-builder v0.1.1 [INFO] [stderr] Checking icu_normalizer v1.5.0 [INFO] [stderr] Checking rand_xorshift v0.3.0 [INFO] [stderr] Checking wyhash v0.5.0 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking bv v0.11.1 [INFO] [stderr] Checking vec-collections v0.4.3 [INFO] [stderr] Checking idna_adapter v1.2.0 [INFO] [stderr] Checking piz v0.5.1 [INFO] [stderr] Checking slog-json v2.6.1 [INFO] [stderr] Checking idna v1.0.3 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking twox-hash v1.6.3 [INFO] [stderr] Checking argmin-math v0.3.0 [INFO] [stderr] Checking anndists v0.1.2 [INFO] [stderr] Checking url v2.5.4 [INFO] [stderr] Checking gbdt v0.1.3 [INFO] [stderr] Checking seq_io v0.3.2 [INFO] [stderr] Checking argmin v0.9.0 [INFO] [stderr] Checking hnsw_rs v0.3.1 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Checking nalgebra v0.32.6 [INFO] [stderr] Checking nalgebra v0.33.2 [INFO] [stderr] Checking redis v0.21.7 [INFO] [stderr] Checking bit-vec_serde v0.6.0 [INFO] [stderr] Checking multimap v0.10.0 [INFO] [stderr] Checking clap v4.5.26 [INFO] [stderr] Checking xdr-codec v0.2.5 [INFO] [stderr] Checking crossbeam v0.8.4 [INFO] [stderr] Checking env_logger v0.11.6 [INFO] [stderr] Checking simple-logging v2.0.2 [INFO] [stderr] Compiling getset v0.1.3 [INFO] [stderr] Checking needletail v0.4.1 [INFO] [stderr] Compiling strum_macros v0.21.1 [INFO] [stderr] Checking typed-builder v0.18.2 [INFO] [stderr] Checking intervallum v1.4.1 [INFO] [stderr] Checking cuckoofilter v0.5.0 [INFO] [stderr] Checking histogram v0.11.1 [INFO] [stderr] Checking niffler v2.6.0 [INFO] [stderr] Checking env_logger v0.9.3 [INFO] [stderr] Checking memmap2 v0.9.5 [INFO] [stderr] Checking memory-stats v1.2.0 [INFO] [stderr] Checking primal-check v0.3.4 [INFO] [stderr] Checking streaming-stats v0.2.3 [INFO] [stderr] Checking rust-lapper v1.1.0 [INFO] [stderr] Checking counter v0.6.0 [INFO] [stderr] Checking roaring v0.10.10 [INFO] [stderr] Checking roots v0.0.8 [INFO] [stderr] Checking xxh3 v0.1.1 [INFO] [stderr] Checking probminhash v0.1.11 [INFO] [stderr] Checking murmurhash3 v0.0.5 [INFO] [stderr] Checking strum v0.21.0 [INFO] [stderr] Checking md5 v0.7.0 [INFO] [stderr] Checking frag_gene_scan_rs v1.1.0 [INFO] [stderr] Checking bigsig v0.1.0 [INFO] [stderr] Checking kmerutils v0.0.12 [INFO] [stderr] Checking statrs v0.17.1 [INFO] [stderr] Checking statrs v0.16.1 [INFO] [stderr] Checking statrs v0.18.0 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking skani v0.1.1 [INFO] [stderr] Checking gsearch v0.1.5 (/opt/rustwide/workdir) [INFO] [stdout] warning: value assigned to `nb_sent` is never read [INFO] [stdout] --> src/dna/dnasketch.rs:226:21 [INFO] [stdout] | [INFO] [stdout] 226 | nb_sent = 0; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `nb_sent` is never read [INFO] [stdout] --> src/aa/aasketch.rs:213:21 [INFO] [stdout] | [INFO] [stdout] 213 | nb_sent = 0; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `nb_sent` is never read [INFO] [stdout] --> src/dna/dnasketch.rs:226:21 [INFO] [stdout] | [INFO] [stdout] 226 | nb_sent = 0; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `hnsw_rs::prelude::DistHamming` [INFO] [stdout] --> src/bin/gsearch.rs:102:5 [INFO] [stdout] | [INFO] [stdout] 102 | use hnsw_rs::prelude::DistHamming; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `scale_modify` [INFO] [stdout] --> src/bin/gsearch.rs:225:9 [INFO] [stdout] | [INFO] [stdout] 225 | let scale_modify: &f64; [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_scale_modify` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `nb_sent` is never read [INFO] [stdout] --> src/aa/aasketch.rs:213:21 [INFO] [stdout] | [INFO] [stdout] 213 | nb_sent = 0; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `hnsw_rs::prelude::DistHamming` [INFO] [stdout] --> src/bin/gsearch.rs:102:5 [INFO] [stdout] | [INFO] [stdout] 102 | use hnsw_rs::prelude::DistHamming; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `scale_modify` [INFO] [stdout] --> src/bin/gsearch.rs:225:9 [INFO] [stdout] | [INFO] [stdout] 225 | let scale_modify: &f64; [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_scale_modify` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 45s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4, partitions v0.2.4, redis v0.21.7 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 3` [INFO] running `Command { std: "docker" "inspect" "7feea55000836f5c4b27ee7cae9065a8760f7ad1fea2be475b8b323693001121", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7feea55000836f5c4b27ee7cae9065a8760f7ad1fea2be475b8b323693001121", kill_on_drop: false }` [INFO] [stdout] 7feea55000836f5c4b27ee7cae9065a8760f7ad1fea2be475b8b323693001121