[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 906a4ccff4ac21ca2ed097e42c89b1df983bae0e
[INFO] testing IMTMarburg/mbf_bam against master#0d162b25edd5bf0dba9a22e83b614f1113e90474 for pr-150681
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam
[INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 0d162b25edd5bf0dba9a22e83b614f1113e90474
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded thiserror-impl v1.0.64
[INFO] [stderr]   Downloaded thiserror v1.0.64
[INFO] [stderr]   Downloaded tempfile v3.13.0
[INFO] [stderr]   Downloaded failure_derive v0.1.8
[INFO] [stderr]   Downloaded url v2.5.2
[INFO] [stderr]   Downloaded pyo3-macros v0.20.3
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded bytecount v0.6.8
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded ex v0.1.3
[INFO] [stderr]   Downloaded csv-core v0.1.11
[INFO] [stderr]   Downloaded anyhow v1.0.89
[INFO] [stderr]   Downloaded matrixmultiply v0.3.9
[INFO] [stderr]   Downloaded safe_arch v0.7.2
[INFO] [stderr]   Downloaded wide v0.7.28
[INFO] [stderr]   Downloaded flate2 v1.0.34
[INFO] [stderr]   Downloaded hashbrown v0.15.0
[INFO] [stderr]   Downloaded statrs v0.17.1
[INFO] [stderr]   Downloaded portable-atomic v1.9.0
[INFO] [stderr]   Downloaded bio v2.0.3
[INFO] [stderr]   Downloaded cc v1.1.30
[INFO] [stderr]   Downloaded syn v2.0.79
[INFO] [stderr]   Downloaded rust-htslib v0.46.0
[INFO] [stderr]   Downloaded regex v1.11.0
[INFO] [stderr]   Downloaded simba v0.8.1
[INFO] [stderr]   Downloaded pyo3-ffi v0.20.3
[INFO] [stderr]   Downloaded rustix v0.38.37
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.20.3
[INFO] [stderr]   Downloaded proc-macro2 v1.0.88
[INFO] [stderr]   Downloaded nalgebra v0.32.6
[INFO] [stderr]   Downloaded bytemuck v1.19.0
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded failure v0.1.8
[INFO] [stderr]   Downloaded pyo3 v0.20.3
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded portable-atomic-util v0.2.2
[INFO] [stderr]   Downloaded ordered-float v4.4.0
[INFO] [stderr]   Downloaded pyo3-build-config v0.20.3
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded cmake v0.1.51
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded regex-automata v0.4.8
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded nalgebra-macros v0.2.2
[INFO] [stderr]   Downloaded libc v0.2.160
[INFO] [stderr]   Downloaded indoc v2.0.5
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded multimap v0.10.0
[INFO] [stderr]   Downloaded libz-sys v1.1.20
[INFO] [stderr]   Downloaded unindent v0.2.3
[INFO] [stderr]   Downloaded fastrand v2.1.1
[INFO] [stderr]   Downloaded csv v1.3.0
[INFO] [stderr]   Downloaded curl-sys v0.4.77+curl-8.10.1
[INFO] [stderr]   Downloaded hts-sys v2.1.4
[INFO] [stderr]   Downloaded openssl-src v300.3.2+3.3.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 09e11e67bb9b3734a04d9fe3510b3793faff4528d48b2180d3aeb2dddb14ba81
[INFO] running `Command { std: "docker" "start" "-a" "09e11e67bb9b3734a04d9fe3510b3793faff4528d48b2180d3aeb2dddb14ba81", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "09e11e67bb9b3734a04d9fe3510b3793faff4528d48b2180d3aeb2dddb14ba81", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "09e11e67bb9b3734a04d9fe3510b3793faff4528d48b2180d3aeb2dddb14ba81", kill_on_drop: false }`
[INFO] [stdout] 09e11e67bb9b3734a04d9fe3510b3793faff4528d48b2180d3aeb2dddb14ba81
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a42c83e8f1660d5df3ab833b3353513ef1529bc293872ad8e5dd149f41943ef0
[INFO] running `Command { std: "docker" "start" "-a" "a42c83e8f1660d5df3ab833b3353513ef1529bc293872ad8e5dd149f41943ef0", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.160
[INFO] [stderr]    Compiling proc-macro2 v1.0.88
[INFO] [stderr]    Compiling unicode-ident v1.0.13
[INFO] [stderr]    Compiling autocfg v1.4.0
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling pkg-config v0.3.31
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling target-lexicon v0.12.16
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling memchr v2.7.4
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling once_cell v1.20.2
[INFO] [stderr]    Compiling serde v1.0.210
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling crossbeam-utils v0.8.20
[INFO] [stderr]    Compiling bytemuck v1.19.0
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]    Compiling rustversion v1.0.18
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling safe_arch v0.7.2
[INFO] [stderr]    Compiling tinyvec_macros v0.1.1
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling thiserror v1.0.64
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling tinyvec v1.8.0
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling syn v2.0.79
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling pyo3-build-config v0.20.3
[INFO] [stderr]    Compiling wide v0.7.28
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling lock_api v0.4.12
[INFO] [stderr]    Compiling adler2 v2.0.0
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling parking_lot_core v0.9.10
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling miniz_oxide v0.8.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling memoffset v0.9.1
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]    Compiling getrandom v0.2.15
[INFO] [stderr]    Compiling unicode-normalization v0.1.24
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling unicode-xid v0.2.6
[INFO] [stderr]    Compiling cc v1.1.30
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling scopeguard v1.2.0
[INFO] [stderr]    Compiling gimli v0.31.1
[INFO] [stderr]    Compiling smallvec v1.13.2
[INFO] [stderr]    Compiling hashbrown v0.15.0
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling regex-automata v0.4.8
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling failure_derive v0.1.8
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling cmake v0.1.51
[INFO] [stderr]    Compiling openssl-src v300.3.2+3.3.2
[INFO] [stderr]    Compiling anyhow v1.0.89
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling portable-atomic v1.9.0
[INFO] [stderr]    Compiling unicode-bidi v0.3.17
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling pyo3-ffi v0.20.3
[INFO] [stderr]    Compiling simba v0.8.1
[INFO] [stderr]    Compiling indexmap v2.6.0
[INFO] [stderr]    Compiling pyo3 v0.20.3
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling synstructure v0.12.6
[INFO] [stderr]    Compiling crossbeam-deque v0.8.5
[INFO] [stderr]    Compiling idna v0.5.0
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling object v0.36.5
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]    Compiling openssl-sys v0.9.104
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.77+curl-8.10.1
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling hts-sys v2.1.4
[INFO] [stderr]    Compiling ryu v1.0.18
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling rustc-demangle v0.1.24
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling url v2.5.2
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling addr2line v0.24.2
[INFO] [stderr]    Compiling pyo3-macros-backend v0.20.3
[INFO] [stderr]    Compiling parking_lot v0.12.3
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling itertools v0.13.0
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr]    Compiling ordered-float v4.4.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling regex v1.11.0
[INFO] [stderr]    Compiling crc32fast v1.4.2
[INFO] [stderr]    Compiling unindent v0.2.3
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling indoc v2.0.5
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling flate2 v1.0.34
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling ex v0.1.3
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling serde_derive v1.0.210
[INFO] [stderr]    Compiling thiserror-impl v1.0.64
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling pyo3-macros v0.20.3
[INFO] [stderr]    Compiling zerocopy v0.7.35
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling backtrace v0.3.74
[INFO] [stderr]    Compiling failure v0.1.8
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling ppv-lite86 v0.2.20
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling nalgebra v0.32.6
[INFO] [stderr]    Compiling multimap v0.10.0
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling statrs v0.17.1
[INFO] [stderr]    Compiling bio v2.0.3
[INFO] [stderr]    Compiling rust-htslib v0.46.0
[INFO] [stderr]    Compiling mbf_bam v0.6.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]   --> src/count_reads/by_barcode.rs:95:25
[INFO] [stdout]    |
[INFO] [stdout] 95 |     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stdout]    |                         ^             ^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 95 -     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stdout] 95 +     flat.sort_by(|a, b| a.1.cmp(&b.1));
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/lib.rs:20:17
[INFO] [stdout]    |
[INFO] [stdout] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stdout]    |                 ^---
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 `Fail` is not local
[INFO] [stdout]    |                 move the `impl` block outside of this constant `_DERIVE_failure_Fail_FOR_BamError`
[INFO] [stdout] 21 | pub enum BamError {
[INFO] [stdout]    |          -------- `BamError` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stdout]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/lib.rs:20:17
[INFO] [stdout]    |
[INFO] [stdout] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stdout]    |                 ^---
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 `Display` is not local
[INFO] [stdout]    |                 move the `impl` block outside of this constant `_DERIVE_failure_core_fmt_Display_FOR_BamError`
[INFO] [stdout] 21 | pub enum BamError {
[INFO] [stdout]    |          -------- `BamError` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/count_reads/chunked_genome.rs:45:17
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator {
[INFO] [stdout]    |                 ^^^^^     ^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator<'_> {
[INFO] [stdout]    |                                                ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 04s
[INFO] running `Command { std: "docker" "inspect" "a42c83e8f1660d5df3ab833b3353513ef1529bc293872ad8e5dd149f41943ef0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a42c83e8f1660d5df3ab833b3353513ef1529bc293872ad8e5dd149f41943ef0", kill_on_drop: false }`
[INFO] [stdout] a42c83e8f1660d5df3ab833b3353513ef1529bc293872ad8e5dd149f41943ef0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 645bde748c3df9c79f3a5e17bc53fa9278d681613d92ca357fdb9467fb1c0909
[INFO] running `Command { std: "docker" "start" "-a" "645bde748c3df9c79f3a5e17bc53fa9278d681613d92ca357fdb9467fb1c0909", kill_on_drop: false }`
[INFO] [stderr]    Compiling once_cell v1.20.2
[INFO] [stderr]    Compiling rustix v0.38.37
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]    Compiling linux-raw-sys v0.4.14
[INFO] [stderr]    Compiling fastrand v2.1.1
[INFO] [stderr]    Compiling pyo3-build-config v0.20.3
[INFO] [stderr]    Compiling pyo3-macros-backend v0.20.3
[INFO] [stderr]    Compiling pyo3-ffi v0.20.3
[INFO] [stderr]    Compiling pyo3 v0.20.3
[INFO] [stderr]    Compiling tempfile v3.13.0
[INFO] [stderr]    Compiling pyo3-macros v0.20.3
[INFO] [stderr]    Compiling mbf_bam v0.6.1 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]   --> src/count_reads/by_barcode.rs:95:25
[INFO] [stdout]    |
[INFO] [stdout] 95 |     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stdout]    |                         ^             ^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]    |
[INFO] [stdout] 95 -     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stdout] 95 +     flat.sort_by(|a, b| a.1.cmp(&b.1));
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/lib.rs:20:17
[INFO] [stdout]    |
[INFO] [stdout] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stdout]    |                 ^---
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 `Fail` is not local
[INFO] [stdout]    |                 move the `impl` block outside of this constant `_DERIVE_failure_Fail_FOR_BamError`
[INFO] [stdout] 21 | pub enum BamError {
[INFO] [stdout]    |          -------- `BamError` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stdout]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stdout]   --> src/lib.rs:20:17
[INFO] [stdout]    |
[INFO] [stdout] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stdout]    |                 ^---
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 `Display` is not local
[INFO] [stdout]    |                 move the `impl` block outside of this constant `_DERIVE_failure_core_fmt_Display_FOR_BamError`
[INFO] [stdout] 21 | pub enum BamError {
[INFO] [stdout]    |          -------- `BamError` is not local
[INFO] [stdout]    |
[INFO] [stdout]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stdout]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stdout]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stdout]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stdout]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/count_reads/chunked_genome.rs:45:17
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator {
[INFO] [stdout]    |                 ^^^^^     ^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator<'_> {
[INFO] [stdout]    |                                                ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 11.49s
[INFO] running `Command { std: "docker" "inspect" "645bde748c3df9c79f3a5e17bc53fa9278d681613d92ca357fdb9467fb1c0909", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "645bde748c3df9c79f3a5e17bc53fa9278d681613d92ca357fdb9467fb1c0909", kill_on_drop: false }`
[INFO] [stdout] 645bde748c3df9c79f3a5e17bc53fa9278d681613d92ca357fdb9467fb1c0909
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 3029f3ccc73e4ee7d7d80d2c55985c9d7ce4dcc035faea305a880e4823df2494
[INFO] running `Command { std: "docker" "start" "-a" "3029f3ccc73e4ee7d7d80d2c55985c9d7ce4dcc035faea305a880e4823df2494", kill_on_drop: false }`
[INFO] [stderr] warning: unnecessary parentheses around closure body
[INFO] [stderr]   --> src/count_reads/by_barcode.rs:95:25
[INFO] [stderr]    |
[INFO] [stderr] 95 |     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stderr]    |                         ^             ^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] help: remove these parentheses
[INFO] [stderr]    |
[INFO] [stderr] 95 -     flat.sort_by(|a, b| (a.1.cmp(&b.1)));
[INFO] [stderr] 95 +     flat.sort_by(|a, b| a.1.cmp(&b.1));
[INFO] [stderr]    |
[INFO] [stderr] 
[INFO] [stderr] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stderr]   --> src/lib.rs:20:17
[INFO] [stderr]    |
[INFO] [stderr] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stderr]    |                 ^---
[INFO] [stderr]    |                 |
[INFO] [stderr]    |                 `Fail` is not local
[INFO] [stderr]    |                 move the `impl` block outside of this constant `_DERIVE_failure_Fail_FOR_BamError`
[INFO] [stderr] 21 | pub enum BamError {
[INFO] [stderr]    |          -------- `BamError` is not local
[INFO] [stderr]    |
[INFO] [stderr]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stderr]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stderr]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stderr]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stderr]    = note: `#[warn(non_local_definitions)]` on by default
[INFO] [stderr]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stderr] 
[INFO] [stderr] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item
[INFO] [stderr]   --> src/lib.rs:20:17
[INFO] [stderr]    |
[INFO] [stderr] 20 | #[derive(Debug, Fail, Clone)]
[INFO] [stderr]    |                 ^---
[INFO] [stderr]    |                 |
[INFO] [stderr]    |                 `Display` is not local
[INFO] [stderr]    |                 move the `impl` block outside of this constant `_DERIVE_failure_core_fmt_Display_FOR_BamError`
[INFO] [stderr] 21 | pub enum BamError {
[INFO] [stderr]    |          -------- `BamError` is not local
[INFO] [stderr]    |
[INFO] [stderr]    = note: the derive macro `Fail` defines the non-local `impl`, and may need to be changed
[INFO] [stderr]    = note: the derive macro `Fail` may come from an old version of the `failure_derive` crate, try updating your dependency with `cargo update -p failure_derive`
[INFO] [stderr]    = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl`
[INFO] [stderr]    = note: items in an anonymous const item (`const _: () = { ... }`) are treated as in the same scope as the anonymous const's declaration for the purpose of this lint
[INFO] [stderr]    = note: this warning originates in the derive macro `Fail` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stderr] 
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]   --> src/count_reads/chunked_genome.rs:45:17
[INFO] [stderr]    |
[INFO] [stderr] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator {
[INFO] [stderr]    |                 ^^^^^     ^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]    |                 |
[INFO] [stderr]    |                 the lifetime is elided here
[INFO] [stderr]    |
[INFO] [stderr]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]    |
[INFO] [stderr] 45 |     pub fn iter(&self) -> ChunkedGenomeIterator<'_> {
[INFO] [stderr]    |                                                ++++
[INFO] [stderr] 
[INFO] [stderr] warning: `mbf_bam` (lib test) generated 4 warnings (run `cargo fix --lib -p mbf_bam --tests` to apply 2 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.21s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mbf_bam-50ab1cba9f727043)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stderr] [E::hts_open_format] Failed to open file "test.bam" : Read-only file system
[INFO] [stdout] test bam_ext::tests::test_introns ... ok
[INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename_none ... ok
[INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename_noop ... ok
[INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename ... ok
[INFO] [stdout] test bam_ext::tests::spliced_reads ... ok
[INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename2 ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- bam_manipulation::tests::test_filter_and_rename2 stdout ----
[INFO] [stdout] [src/bam_manipulation.rs:172:5] &new_header.clone().to_hashmap() = {
[INFO] [stdout]     "SQ": [
[INFO] [stdout]         {
[INFO] [stdout]             "SN": "2",
[INFO] [stdout]             "LN": "1584",
[INFO] [stdout]         },
[INFO] [stdout]     ],
[INFO] [stdout]     "HD": [
[INFO] [stdout]         {
[INFO] [stdout]             "VN": "1.0",
[INFO] [stdout]         },
[INFO] [stdout]     ],
[INFO] [stdout]     "PG": [
[INFO] [stdout]         {
[INFO] [stdout]             "ID": "P1",
[INFO] [stdout]             "VN": "1.0",
[INFO] [stdout]         },
[INFO] [stdout]         {
[INFO] [stdout]             "ID": "P2",
[INFO] [stdout]             "VN": "1.1",
[INFO] [stdout]         },
[INFO] [stdout]         {
[INFO] [stdout]             "ID": "mbf_bam.filter_and_rename_references",
[INFO] [stdout]         },
[INFO] [stdout]     ],
[INFO] [stdout]     "RG": [
[INFO] [stdout]         {
[INFO] [stdout]             "ID": "L1",
[INFO] [stdout]             "PU": "SC_1_10",
[INFO] [stdout]             "LB": "SC_1",
[INFO] [stdout]             "SM": "NA12891",
[INFO] [stdout]             "CN": "name:with:colon",
[INFO] [stdout]         },
[INFO] [stdout]         {
[INFO] [stdout]             "ID": "L2",
[INFO] [stdout]             "PU": "SC_2_12",
[INFO] [stdout]             "LB": "SC_2",
[INFO] [stdout]             "SM": "NA12891",
[INFO] [stdout]             "CN": "name:with:colon",
[INFO] [stdout]         },
[INFO] [stdout]     ],
[INFO] [stdout] }
[INFO] [stdout] 
[INFO] [stdout] thread 'bam_manipulation::tests::test_filter_and_rename2' (28) panicked at src/bam_manipulation.rs:338:92:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: UnknownError { msg: "BamOpen { target: \"test.bam\" }" }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5788d53447e2 - std[3b51380354919863]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x5788d53447e2 - std[3b51380354919863]::backtrace_rs::backtrace::trace_unsynchronized::<std[3b51380354919863]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x5788d53447e2 - std[3b51380354919863]::sys::backtrace::_print_fmt
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/backtrace.rs:74:9
[INFO] [stdout]    3:     0x5788d53447e2 - <<std[3b51380354919863]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[27de1724e4349be2]::fmt::Display>::fmt
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/backtrace.rs:44:26
[INFO] [stdout]    4:     0x5788d535a6da - <core[27de1724e4349be2]::fmt::rt::Argument>::fmt
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/fmt/rt.rs:152:76
[INFO] [stdout]    5:     0x5788d535a6da - core[27de1724e4349be2]::fmt::write
[INFO] [stdout]    6:     0x5788d5349776 - std[3b51380354919863]::io::default_write_fmt::<alloc[a57f19327c0ad893]::vec::Vec<u8>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x5788d5349776 - <alloc[a57f19327c0ad893]::vec::Vec<u8> as std[3b51380354919863]::io::Write>::write_fmt
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/io/mod.rs:1994:13
[INFO] [stdout]    8:     0x5788d532204f - <std[3b51380354919863]::sys::backtrace::BacktraceLock>::print
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/backtrace.rs:47:9
[INFO] [stdout]    9:     0x5788d532204f - std[3b51380354919863]::panicking::default_hook::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:292:27
[INFO] [stdout]   10:     0x5788d533c499 - std[3b51380354919863]::panicking::default_hook
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:316:9
[INFO] [stdout]   11:     0x5788d4bca26e - <alloc[a57f19327c0ad893]::boxed::Box<dyn for<'a, 'b> core[27de1724e4349be2]::ops::function::Fn<(&'a std[3b51380354919863]::panic::PanicHookInfo<'b>,), Output = ()> + core[27de1724e4349be2]::marker::Sync + core[27de1724e4349be2]::marker::Send> as core[27de1724e4349be2]::ops::function::Fn<(&std[3b51380354919863]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/alloc/src/boxed.rs:2220:9
[INFO] [stdout]   12:     0x5788d4bca26e - test[182b2e79ecd7bbd9]::test_main_with_exit_callback::<test[182b2e79ecd7bbd9]::test_main::{closure#0}>::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x5788d533c652 - <alloc[a57f19327c0ad893]::boxed::Box<dyn for<'a, 'b> core[27de1724e4349be2]::ops::function::Fn<(&'a std[3b51380354919863]::panic::PanicHookInfo<'b>,), Output = ()> + core[27de1724e4349be2]::marker::Sync + core[27de1724e4349be2]::marker::Send> as core[27de1724e4349be2]::ops::function::Fn<(&std[3b51380354919863]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/alloc/src/boxed.rs:2220:9
[INFO] [stdout]   14:     0x5788d533c652 - std[3b51380354919863]::panicking::panic_with_hook
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:833:13
[INFO] [stdout]   15:     0x5788d5322108 - std[3b51380354919863]::panicking::panic_handler::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:698:13
[INFO] [stdout]   16:     0x5788d5317279 - std[3b51380354919863]::sys::backtrace::__rust_end_short_backtrace::<std[3b51380354919863]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/backtrace.rs:182:18
[INFO] [stdout]   17:     0x5788d5322f5d - __rustc[d79c0ace40940972]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:689:5
[INFO] [stdout]   18:     0x5788d535ae9c - core[27de1724e4349be2]::panicking::panic_fmt
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x5788d535ac12 - core[27de1724e4349be2]::result::unwrap_failed
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/result.rs:1867:5
[INFO] [stdout]   20:     0x5788d4b9f4ba - <core[27de1724e4349be2]::result::Result<(), mbf_bam[24bfee97d1902b1e]::BamError>>::unwrap
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/result.rs:1233:23
[INFO] [stdout]   21:     0x5788d4b9f4ba - mbf_bam[24bfee97d1902b1e]::bam_manipulation::tests::test_filter_and_rename2
[INFO] [stdout]                                at /opt/rustwide/workdir/src/bam_manipulation.rs:338:92
[INFO] [stdout]   22:     0x5788d4b9dbf7 - mbf_bam[24bfee97d1902b1e]::bam_manipulation::tests::test_filter_and_rename2::{closure#0}
[INFO] [stdout]                                at /opt/rustwide/workdir/src/bam_manipulation.rs:324:33
[INFO] [stdout]   23:     0x5788d4b95f36 - <mbf_bam[24bfee97d1902b1e]::bam_manipulation::tests::test_filter_and_rename2::{closure#0} as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x5788d4bbe61b - <fn() -> core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String> as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x5788d4bbe61b - test[182b2e79ecd7bbd9]::__rust_begin_short_backtrace::<core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String>, fn() -> core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:663:18
[INFO] [stdout]   26:     0x5788d4bcae7a - test[182b2e79ecd7bbd9]::run_test_in_process::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:686:74
[INFO] [stdout]   27:     0x5788d4bcae7a - <core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<test[182b2e79ecd7bbd9]::run_test_in_process::{closure#0}> as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   28:     0x5788d4bcae7a - std[3b51380354919863]::panicking::catch_unwind::do_call::<core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<test[182b2e79ecd7bbd9]::run_test_in_process::{closure#0}>, core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:581:40
[INFO] [stdout]   29:     0x5788d4bcae7a - std[3b51380354919863]::panicking::catch_unwind::<core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String>, core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<test[182b2e79ecd7bbd9]::run_test_in_process::{closure#0}>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:544:19
[INFO] [stdout]   30:     0x5788d4bcae7a - std[3b51380354919863]::panic::catch_unwind::<core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<test[182b2e79ecd7bbd9]::run_test_in_process::{closure#0}>, core[27de1724e4349be2]::result::Result<(), alloc[a57f19327c0ad893]::string::String>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x5788d4bcae7a - test[182b2e79ecd7bbd9]::run_test_in_process
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:686:27
[INFO] [stdout]   32:     0x5788d4bcae7a - test[182b2e79ecd7bbd9]::run_test::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:607:43
[INFO] [stdout]   33:     0x5788d4bc6424 - test[182b2e79ecd7bbd9]::run_test::{closure#1}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/test/src/lib.rs:637:41
[INFO] [stdout]   34:     0x5788d4bc6424 - std[3b51380354919863]::sys::backtrace::__rust_begin_short_backtrace::<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   35:     0x5788d4bcd972 - std[3b51380354919863]::thread::lifecycle::spawn_unchecked::<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/thread/lifecycle.rs:91:13
[INFO] [stdout]   36:     0x5788d4bcd972 - <core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<std[3b51380354919863]::thread::lifecycle::spawn_unchecked<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   37:     0x5788d4bcd972 - std[3b51380354919863]::panicking::catch_unwind::do_call::<core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<std[3b51380354919863]::thread::lifecycle::spawn_unchecked<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:581:40
[INFO] [stdout]   38:     0x5788d4bcd972 - std[3b51380354919863]::panicking::catch_unwind::<(), core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<std[3b51380354919863]::thread::lifecycle::spawn_unchecked<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panicking.rs:544:19
[INFO] [stdout]   39:     0x5788d4bcd972 - std[3b51380354919863]::panic::catch_unwind::<core[27de1724e4349be2]::panic::unwind_safe::AssertUnwindSafe<std[3b51380354919863]::thread::lifecycle::spawn_unchecked<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x5788d4bcd972 - std[3b51380354919863]::thread::lifecycle::spawn_unchecked::<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/thread/lifecycle.rs:89:26
[INFO] [stdout]   41:     0x5788d4bcd972 - <std[3b51380354919863]::thread::lifecycle::spawn_unchecked<test[182b2e79ecd7bbd9]::run_test::{closure#1}, ()>::{closure#1} as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x5788d534408f - <alloc[a57f19327c0ad893]::boxed::Box<dyn core[27de1724e4349be2]::ops::function::FnOnce<(), Output = ()> + core[27de1724e4349be2]::marker::Send> as core[27de1724e4349be2]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/alloc/src/boxed.rs:2206:9
[INFO] [stdout]   43:     0x5788d534408f - <std[3b51380354919863]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]                                at /rustc/0d162b25edd5bf0dba9a22e83b614f1113e90474/library/std/src/sys/thread/unix.rs:119:17
[INFO] [stdout]   44:     0x74baae250aa4 - <unknown>
[INFO] [stdout]   45:     0x74baae2dda64 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     bam_manipulation::tests::test_filter_and_rename2
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 5 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.17s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "3029f3ccc73e4ee7d7d80d2c55985c9d7ce4dcc035faea305a880e4823df2494", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3029f3ccc73e4ee7d7d80d2c55985c9d7ce4dcc035faea305a880e4823df2494", kill_on_drop: false }`
[INFO] [stdout] 3029f3ccc73e4ee7d7d80d2c55985c9d7ce4dcc035faea305a880e4823df2494
