[INFO] cloning repository https://github.com/sriram98v/seq_class
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[INFO] [stdout] 523e39bf814d4acd2f79c345e1224f05e0cf86ba
[INFO] testing sriram98v/seq_class against master#0d162b25edd5bf0dba9a22e83b614f1113e90474 for pr-150681
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fseq_class" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
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[INFO] [stderr]    Compiling generalized_suffix_tree v0.1.0 (https://github.com/sriram98v/generalized_suffix_tree#46349b91)
[INFO] [stderr]    Compiling seq_class v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unexpected `cfg` condition name: `has_error_description_deprecated`
[INFO] [stdout]   --> src/main.rs:14:1
[INFO] [stdout]    |
[INFO] [stdout] 14 | / error_chain! {
[INFO] [stdout] 15 | |     foreign_links {
[INFO] [stdout] 16 | |         Glob(glob::GlobError);
[INFO] [stdout] 17 | |         Pattern(glob::PatternError);
[INFO] [stdout] 18 | |     }
[INFO] [stdout] 19 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = help: expected names are: `docsrs`, `feature`, and `test` and 31 more
[INFO] [stdout]    = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate
[INFO] [stdout]    = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg
[INFO] [stdout]    = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain`
[INFO] [stdout]    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration
[INFO] [stdout]    = note: `#[warn(unexpected_cfgs)]` on by default
[INFO] [stdout]    = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:156:13
[INFO] [stdout]     |
[INFO] [stdout] 156 |         let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new();
[INFO] [stdout]     |             ----^^^^^^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `read_id`
[INFO] [stdout]    --> src/main.rs:143:13
[INFO] [stdout]     |
[INFO] [stdout] 143 |         let read_id: String = read_data.id().to_string();
[INFO] [stdout]     |             ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `hit`
[INFO] [stdout]    --> src/main.rs:158:13
[INFO] [stdout]     |
[INFO] [stdout] 158 |         for hit in hits.iter(){
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_hit`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `hamming_distance` is never used
[INFO] [stdout]   --> src/main.rs:59:4
[INFO] [stdout]    |
[INFO] [stdout] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){
[INFO] [stdout]    |    ^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type
[INFO] [stdout]   --> src/main.rs:87:110
[INFO] [stdout]    |
[INFO] [stdout] 87 | ...                   .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len()<refs.get(partial_match.0).unwrap().len())
[INFO] [stdout]    |                                                                        ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(suspicious_double_ref_op)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 38.93s
[INFO] running `Command { std: "docker" "inspect" "667ab372dd5fc32618d81107a4819202415d84c7aa938cab53f1f96272d656a5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "667ab372dd5fc32618d81107a4819202415d84c7aa938cab53f1f96272d656a5", kill_on_drop: false }`
[INFO] [stdout] 667ab372dd5fc32618d81107a4819202415d84c7aa938cab53f1f96272d656a5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 968008c33e141337cea8ee531af3d7d20ee347d0a9ba310c01b29ec71fab287e
[INFO] running `Command { std: "docker" "start" "-a" "968008c33e141337cea8ee531af3d7d20ee347d0a9ba310c01b29ec71fab287e", kill_on_drop: false }`
[INFO] [stderr]    Compiling seq_class v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unexpected `cfg` condition name: `has_error_description_deprecated`
[INFO] [stdout]   --> src/main.rs:14:1
[INFO] [stdout]    |
[INFO] [stdout] 14 | / error_chain! {
[INFO] [stdout] 15 | |     foreign_links {
[INFO] [stdout] 16 | |         Glob(glob::GlobError);
[INFO] [stdout] 17 | |         Pattern(glob::PatternError);
[INFO] [stdout] 18 | |     }
[INFO] [stdout] 19 | | }
[INFO] [stdout]    | |_^
[INFO] [stdout]    |
[INFO] [stdout]    = help: expected names are: `docsrs`, `feature`, and `test` and 31 more
[INFO] [stdout]    = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate
[INFO] [stdout]    = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg
[INFO] [stdout]    = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain`
[INFO] [stdout]    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration
[INFO] [stdout]    = note: `#[warn(unexpected_cfgs)]` on by default
[INFO] [stdout]    = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:156:13
[INFO] [stdout]     |
[INFO] [stdout] 156 |         let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new();
[INFO] [stdout]     |             ----^^^^^^^
[INFO] [stdout]     |             |
[INFO] [stdout]     |             help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `read_id`
[INFO] [stdout]    --> src/main.rs:143:13
[INFO] [stdout]     |
[INFO] [stdout] 143 |         let read_id: String = read_data.id().to_string();
[INFO] [stdout]     |             ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `hit`
[INFO] [stdout]    --> src/main.rs:158:13
[INFO] [stdout]     |
[INFO] [stdout] 158 |         for hit in hits.iter(){
[INFO] [stdout]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_hit`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `hamming_distance` is never used
[INFO] [stdout]   --> src/main.rs:59:4
[INFO] [stdout]    |
[INFO] [stdout] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){
[INFO] [stdout]    |    ^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type
[INFO] [stdout]   --> src/main.rs:87:110
[INFO] [stdout]    |
[INFO] [stdout] 87 | ...                   .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len()<refs.get(partial_match.0).unwrap().len())
[INFO] [stdout]    |                                                                        ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(suspicious_double_ref_op)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.93s
[INFO] running `Command { std: "docker" "inspect" "968008c33e141337cea8ee531af3d7d20ee347d0a9ba310c01b29ec71fab287e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "968008c33e141337cea8ee531af3d7d20ee347d0a9ba310c01b29ec71fab287e", kill_on_drop: false }`
[INFO] [stdout] 968008c33e141337cea8ee531af3d7d20ee347d0a9ba310c01b29ec71fab287e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+0d162b25edd5bf0dba9a22e83b614f1113e90474" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 378cae0aeb27e46d069ce45412d1b530ca165754354f8c4a6029a464874628cf
[INFO] running `Command { std: "docker" "start" "-a" "378cae0aeb27e46d069ce45412d1b530ca165754354f8c4a6029a464874628cf", kill_on_drop: false }`
[INFO] [stderr] warning: unexpected `cfg` condition name: `has_error_description_deprecated`
[INFO] [stderr]   --> src/main.rs:14:1
[INFO] [stderr]    |
[INFO] [stderr] 14 | / error_chain! {
[INFO] [stderr] 15 | |     foreign_links {
[INFO] [stderr] 16 | |         Glob(glob::GlobError);
[INFO] [stderr] 17 | |         Pattern(glob::PatternError);
[INFO] [stderr] 18 | |     }
[INFO] [stderr] 19 | | }
[INFO] [stderr]    | |_^
[INFO] [stderr]    |
[INFO] [stderr]    = help: expected names are: `docsrs`, `feature`, and `test` and 31 more
[INFO] [stderr]    = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate
[INFO] [stderr]    = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg
[INFO] [stderr]    = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain`
[INFO] [stderr]    = note: see <https://doc.rust-lang.org/nightly/rustc/check-cfg/cargo-specifics.html> for more information about checking conditional configuration
[INFO] [stderr]    = note: `#[warn(unexpected_cfgs)]` on by default
[INFO] [stderr]    = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info)
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]    --> src/main.rs:156:13
[INFO] [stderr]     |
[INFO] [stderr] 156 |         let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new();
[INFO] [stderr]     |             ----^^^^^^^
[INFO] [stderr]     |             |
[INFO] [stderr]     |             help: remove this `mut`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `read_id`
[INFO] [stderr]    --> src/main.rs:143:13
[INFO] [stderr]     |
[INFO] [stderr] 143 |         let read_id: String = read_data.id().to_string();
[INFO] [stderr]     |             ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `hit`
[INFO] [stderr]    --> src/main.rs:158:13
[INFO] [stderr]     |
[INFO] [stderr] 158 |         for hit in hits.iter(){
[INFO] [stderr]     |             ^^^ help: if this is intentional, prefix it with an underscore: `_hit`
[INFO] [stderr] 
[INFO] [stderr] warning: function `hamming_distance` is never used
[INFO] [stderr]   --> src/main.rs:59:4
[INFO] [stderr]    |
[INFO] [stderr] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){
[INFO] [stderr]    |    ^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type
[INFO] [stderr]   --> src/main.rs:87:110
[INFO] [stderr]    |
[INFO] [stderr] 87 | ...                   .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len()<refs.get(partial_match.0).unwrap().len())
[INFO] [stderr]    |                                                                        ^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(suspicious_double_ref_op)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `seq_class` (bin "seq_class" test) generated 6 warnings (run `cargo fix --bin "seq_class" -p seq_class --tests` to apply 3 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/seq_class-7888b28ed7267038)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "378cae0aeb27e46d069ce45412d1b530ca165754354f8c4a6029a464874628cf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "378cae0aeb27e46d069ce45412d1b530ca165754354f8c4a6029a464874628cf", kill_on_drop: false }`
[INFO] [stdout] 378cae0aeb27e46d069ce45412d1b530ca165754354f8c4a6029a464874628cf
