[INFO] cloning repository https://github.com/bihealth/varfish-server-worker [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bihealth/varfish-server-worker" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvarfish-server-worker", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvarfish-server-worker'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 723e7cc191f98ec776f04ba8b78d8ca650f1f93c [INFO] checking bihealth/varfish-server-worker/723e7cc191f98ec776f04ba8b78d8ca650f1f93c against master#82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1 for pr-150408 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbihealth%2Fvarfish-server-worker" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/bihealth/varfish-server-worker [INFO] finished tweaking git repo https://github.com/bihealth/varfish-server-worker [INFO] tweaked toml for git repo https://github.com/bihealth/varfish-server-worker written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/bihealth/varfish-server-worker on toolchain 82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/bihealth/varfish-server-worker already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded serde_test v1.0.177 [INFO] [stderr] Downloaded temp_testdir v0.2.3 [INFO] [stderr] Downloaded parse-display v0.10.0 [INFO] [stderr] Downloaded deepsize_derive v0.1.2 [INFO] [stderr] Downloaded clap-verbosity-flag v2.2.3 [INFO] [stderr] Downloaded rust-embed-impl v8.5.0 [INFO] [stderr] Downloaded kinded v0.3.0 [INFO] [stderr] Downloaded utoipa-swagger-ui v7.1.0 [INFO] [stderr] Downloaded clap-verbosity-flag v3.0.2 [INFO] [stderr] Downloaded noodles-fastq v0.12.0 [INFO] [stderr] Downloaded aws-smithy-checksums v0.60.12 [INFO] [stderr] Downloaded aws-types v1.3.3 [INFO] [stderr] Downloaded aws-sigv4 v1.2.4 [INFO] [stderr] Downloaded aws-runtime v1.4.3 [INFO] [stderr] Downloaded aws-sdk-sso v1.42.0 [INFO] [stderr] Downloaded aws-sdk-ssooidc v1.43.0 [INFO] [stderr] Downloaded aws-smithy-runtime v1.7.1 [INFO] [stderr] Downloaded aws-config v1.5.6 [INFO] [stderr] Downloaded aws-sdk-sts v1.42.0 [INFO] [stderr] Downloaded reqwest v0.12.7 [INFO] [stderr] Downloaded bio v2.0.3 [INFO] [stderr] Downloaded quinn-proto v0.11.8 [INFO] [stderr] Downloaded rustls-webpki v0.102.7 [INFO] [stderr] Downloaded zerocopy v0.8.17 [INFO] [stderr] Downloaded biocommons-bioutils v0.1.4 [INFO] [stderr] Downloaded file_diff v1.0.0 [INFO] [stderr] Downloaded hgvs v0.17.3 [INFO] [stderr] Downloaded webpki-roots v0.26.5 [INFO] [stderr] Downloaded object v0.36.4 [INFO] [stderr] Downloaded statrs v0.17.1 [INFO] [stderr] Downloaded lz4-sys v1.10.0 [INFO] [stderr] Downloaded utoipa-gen v4.3.0 [INFO] [stderr] Downloaded noodles-cram v0.65.0 [INFO] [stderr] Downloaded rust_decimal v1.36.0 [INFO] [stderr] Downloaded async-compression v0.4.22 [INFO] [stderr] Downloaded noodles-vcf v0.60.0 [INFO] [stderr] Downloaded rocksdb v0.22.0 [INFO] [stderr] Downloaded rocksdb-utils-lookup v0.4.1 [INFO] [stderr] Downloaded aws-smithy-types v1.2.6 [INFO] [stderr] Downloaded insta v1.42.2 [INFO] [stderr] Downloaded noodles-bam v0.64.0 [INFO] [stderr] Downloaded noodles-sam v0.61.0 [INFO] [stderr] Downloaded mehari v0.29.6 [INFO] [stderr] Downloaded aws-smithy-runtime-api v1.7.2 [INFO] [stderr] Downloaded hyper-util v0.1.8 [INFO] [stderr] Downloaded quinn v0.11.5 [INFO] [stderr] Downloaded zip v1.1.4 [INFO] [stderr] Downloaded cached v0.53.1 [INFO] [stderr] Downloaded nutype_macros v0.5.0 [INFO] [stderr] Downloaded pbjson-types v0.7.0 [INFO] [stderr] Downloaded aws-smithy-eventstream v0.60.5 [INFO] [stderr] Downloaded ext-sort v0.1.4 [INFO] [stderr] Downloaded unicode-properties v0.1.2 [INFO] [stderr] Downloaded tokio-postgres v0.7.11 [INFO] [stderr] Downloaded procfs-core v0.16.0 [INFO] [stderr] Downloaded quick_cache v0.6.9 [INFO] [stderr] Downloaded seqrepo v0.10.3 [INFO] [stderr] Downloaded noodles-bcf v0.57.0 [INFO] [stderr] Downloaded rust-embed v8.5.0 [INFO] [stderr] Downloaded noodles-csi v0.36.0 [INFO] [stderr] Downloaded pbjson-build v0.7.0 [INFO] [stderr] Downloaded toml_edit v0.22.20 [INFO] [stderr] Downloaded aws-smithy-http v0.60.11 [INFO] [stderr] Downloaded utoipa v4.2.3 [INFO] [stderr] Downloaded procfs v0.16.0 [INFO] [stderr] Downloaded noodles-bgzf v0.30.0 [INFO] [stderr] Downloaded noodles-fasta v0.39.0 [INFO] [stderr] Downloaded noodles-bgzf v0.31.0 [INFO] [stderr] Downloaded annonars v0.41.3 [INFO] [stderr] Downloaded noodles-tabix v0.42.0 [INFO] [stderr] Downloaded ipnet v2.10.0 [INFO] [stderr] Downloaded quinn-udp v0.5.5 [INFO] [stderr] Downloaded rustls-pki-types v1.8.0 [INFO] [stderr] Downloaded bgzip v0.3.1 [INFO] [stderr] Downloaded byte-unit v5.1.6 [INFO] [stderr] Downloaded coz v0.1.3 [INFO] [stderr] Downloaded postgres-types v0.2.7 [INFO] [stderr] Downloaded kinded_macros v0.3.0 [INFO] [stderr] Downloaded noodles-fasta v0.40.0 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded pbjson v0.7.0 [INFO] [stderr] Downloaded lru v0.12.4 [INFO] [stderr] Downloaded aws-sdk-s3 v1.51.0 [INFO] [stderr] Downloaded deepsize v0.2.0 [INFO] [stderr] Downloaded hxdmp v0.2.1 [INFO] [stderr] Downloaded cached_proc_macro v0.23.0 [INFO] [stderr] Downloaded nutype v0.5.0 [INFO] [stderr] Downloaded noodles-bed v0.15.0 [INFO] [stderr] Downloaded boolvec v0.2.6 [INFO] [stderr] Downloaded impl-more v0.1.6 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded jsonl v4.0.1 [INFO] [stderr] Downloaded noodles v0.76.0 [INFO] [stderr] Downloaded mintex v0.1.3 [INFO] [stderr] Downloaded postgres v0.19.8 [INFO] [stderr] Downloaded parse-display-derive v0.10.0 [INFO] [stderr] Downloaded noodles-gff v0.34.0 [INFO] [stderr] Downloaded noodles v0.77.0 [INFO] [stderr] Downloaded zerocopy-derive v0.8.17 [INFO] [stderr] Downloaded rust-embed-utils v8.5.0 [INFO] [stderr] Downloaded librocksdb-sys v0.16.0+8.10.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f6be0eec1a01955528c59e83ce3f5bf7537c6bd7853bac3125975dcce15c6cbd [INFO] running `Command { std: "docker" "start" "-a" "f6be0eec1a01955528c59e83ce3f5bf7537c6bd7853bac3125975dcce15c6cbd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f6be0eec1a01955528c59e83ce3f5bf7537c6bd7853bac3125975dcce15c6cbd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f6be0eec1a01955528c59e83ce3f5bf7537c6bd7853bac3125975dcce15c6cbd", kill_on_drop: false }` [INFO] [stdout] f6be0eec1a01955528c59e83ce3f5bf7537c6bd7853bac3125975dcce15c6cbd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 779c0a5f3254422617e49340940fbd380de3837aadb5c98c18f837a6400eb483 [INFO] running `Command { std: "docker" "start" "-a" "779c0a5f3254422617e49340940fbd380de3837aadb5c98c18f837a6400eb483", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.87 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Checking value-bag v1.9.0 [INFO] [stderr] Checking bytes v1.7.1 [INFO] [stderr] Compiling serde v1.0.217 [INFO] [stderr] Checking smallvec v1.13.2 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Checking lock_api v0.4.12 [INFO] [stderr] Checking tracing-core v0.1.33 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Compiling regex-automata v0.4.8 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Checking miniz_oxide v0.8.7 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Checking cpufeatures v0.2.13 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Compiling anyhow v1.0.97 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Checking sha2 v0.10.8 [INFO] [stderr] Checking hmac v0.12.1 [INFO] [stderr] Checking log v0.4.27 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling httparse v1.9.4 [INFO] [stderr] Checking crossbeam-channel v0.5.13 [INFO] [stderr] Checking bstr v1.10.0 [INFO] [stderr] Compiling getrandom v0.3.1 [INFO] [stderr] Checking http v0.2.12 [INFO] [stderr] Checking flate2 v1.1.1 [INFO] [stderr] Checking http v1.1.0 [INFO] [stderr] Checking bytes-utils v0.1.4 [INFO] [stderr] Checking unicode-normalization v0.1.23 [INFO] [stderr] Compiling prettyplease v0.2.22 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Compiling rustix v1.0.3 [INFO] [stderr] Checking der v0.6.1 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Checking http-body v1.0.1 [INFO] [stderr] Compiling zerocopy v0.8.17 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Compiling cc v1.1.15 [INFO] [stderr] Checking signal-hook-registry v1.4.2 [INFO] [stderr] Checking mio v1.0.2 [INFO] [stderr] Checking socket2 v0.5.7 [INFO] [stderr] Checking parking_lot v0.12.3 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking spki v0.6.0 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling toml_datetime v0.6.8 [INFO] [stderr] Compiling multimap v0.10.0 [INFO] [stderr] Compiling winnow v0.6.18 [INFO] [stderr] Checking http-body v0.4.6 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking crypto-bigint v0.4.9 [INFO] [stderr] Checking ff v0.12.1 [INFO] [stderr] Checking pkcs8 v0.9.0 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Checking base16ct v0.1.1 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Checking group v0.12.1 [INFO] [stderr] Checking sec1 v0.3.0 [INFO] [stderr] Checking regex-lite v0.1.6 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Checking signature v1.6.4 [INFO] [stderr] Checking concurrent-queue v2.5.0 [INFO] [stderr] Compiling libloading v0.8.5 [INFO] [stderr] Compiling unicase v2.7.0 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling bindgen v0.69.4 [INFO] [stderr] Compiling rustix v0.38.41 [INFO] [stderr] Checking bytemuck v1.17.1 [INFO] [stderr] Checking anstyle-parse v0.2.5 [INFO] [stderr] Checking elliptic-curve v0.12.3 [INFO] [stderr] Checking rfc6979 v0.3.1 [INFO] [stderr] Checking safe_arch v0.7.2 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Compiling aws-types v1.3.3 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Compiling ring v0.17.8 [INFO] [stderr] Compiling zstd-sys v2.0.13+zstd.1.5.6 [INFO] [stderr] Checking ecdsa v0.14.8 [INFO] [stderr] Compiling lz4-sys v1.10.0 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling tempfile v3.19.1 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Checking anstyle-query v1.1.1 [INFO] [stderr] Checking rand_core v0.9.0 [INFO] [stderr] Checking linux-raw-sys v0.4.14 [INFO] [stderr] Compiling zstd-safe v7.2.1 [INFO] [stderr] Checking colorchoice v1.0.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Checking anstyle v1.0.8 [INFO] [stderr] Checking p256 v0.11.1 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Compiling darling_core v0.20.10 [INFO] [stderr] Compiling toml_edit v0.22.20 [INFO] [stderr] Checking anstream v0.6.15 [INFO] [stderr] Checking wide v0.7.28 [INFO] [stderr] Checking crypto-bigint v0.5.5 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking idna v0.5.0 [INFO] [stderr] Checking sha1 v0.10.6 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Checking unicode-properties v0.1.2 [INFO] [stderr] Compiling zip v1.1.4 [INFO] [stderr] Compiling unicode-bidi v0.3.15 [INFO] [stderr] Checking stringprep v0.1.5 [INFO] [stderr] Checking url v2.5.2 [INFO] [stderr] Compiling tracing v0.1.41 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] error: could not compile `syn` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/82dd3cb008233bfe50ba6b8d6618e6bbd6054eb1/bin/rustc --crate-name syn --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/syn-2.0.87/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --cfg 'feature="clone-impls"' --cfg 'feature="default"' --cfg 'feature="derive"' --cfg 'feature="extra-traits"' --cfg 'feature="full"' --cfg 'feature="parsing"' --cfg 'feature="printing"' --cfg 'feature="proc-macro"' --cfg 'feature="visit"' --cfg 'feature="visit-mut"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("clone-impls", "default", "derive", "extra-traits", "fold", "full", "parsing", "printing", "proc-macro", "test", "visit", "visit-mut"))' -C metadata=12177e01052c7f2f -C extra-filename=-f460112946d49ba9 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-940521cad3ba570c.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-dfa9d4d1a6b90b2b.rmeta --extern unicode_ident=/opt/rustwide/target/debug/deps/libunicode_ident-d14904b1232aa2ec.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "779c0a5f3254422617e49340940fbd380de3837aadb5c98c18f837a6400eb483", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "779c0a5f3254422617e49340940fbd380de3837aadb5c98c18f837a6400eb483", kill_on_drop: false }` [INFO] [stdout] 779c0a5f3254422617e49340940fbd380de3837aadb5c98c18f837a6400eb483