[INFO] cloning repository https://github.com/AndreaGuarracino/lib_bpaf
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/AndreaGuarracino/lib_bpaf" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1a8fbcc707d4b4203611b56a81f7fa25b4e069d1
[INFO] checking AndreaGuarracino/lib_bpaf against master#f2c70877a7dbc51cd98e2d5d25209b24d4a586d5 for pr-150097
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] finished tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] tweaked toml for git repo https://github.com/AndreaGuarracino/lib_bpaf written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/AndreaGuarracino/lib_bpaf on toolchain f2c70877a7dbc51cd98e2d5d25209b24d4a586d5
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f2c70877a7dbc51cd98e2d5d25209b24d4a586d5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/AndreaGuarracino/lib_bpaf already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+f2c70877a7dbc51cd98e2d5d25209b24d4a586d5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/lib_tracepoints`
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/lib_wfa2`
[INFO] [stderr]     Updating git submodule `https://github.com/smarco/WFA2-lib`
[INFO] [stderr]      Locking 7 packages to latest compatible versions
[INFO] [stderr]       Adding bytes v1.11.0
[INFO] [stderr]       Adding crossbeam-channel v0.5.15
[INFO] [stderr]       Adding crossbeam-utils v0.8.21
[INFO] [stderr]       Adding libz-rs-sys v0.5.5
[INFO] [stderr]       Adding noodles v0.100.0 (available: v0.104.0)
[INFO] [stderr]       Adding noodles-bgzf v0.42.0
[INFO] [stderr]       Adding zlib-rs v0.5.5
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded libz-rs-sys v0.5.5
[INFO] [stderr]   Downloaded noodles-bgzf v0.42.0
[INFO] [stderr]   Downloaded zlib-rs v0.5.5
[INFO] [stderr]   Downloaded noodles v0.100.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+f2c70877a7dbc51cd98e2d5d25209b24d4a586d5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1186aaf9e2175e274d5ef133447d372c418258bcc17d3a666b959690547a0824
[INFO] running `Command { std: "docker" "start" "-a" "1186aaf9e2175e274d5ef133447d372c418258bcc17d3a666b959690547a0824", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1186aaf9e2175e274d5ef133447d372c418258bcc17d3a666b959690547a0824", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1186aaf9e2175e274d5ef133447d372c418258bcc17d3a666b959690547a0824", kill_on_drop: false }`
[INFO] [stdout] 1186aaf9e2175e274d5ef133447d372c418258bcc17d3a666b959690547a0824
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+f2c70877a7dbc51cd98e2d5d25209b24d4a586d5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 168ca5af7a9c58fff0213cd5d5d7bb07f219d46a5c66f0ba0267c750a1bd97ee
[INFO] running `Command { std: "docker" "start" "-a" "168ca5af7a9c58fff0213cd5d5d7bb07f219d46a5c66f0ba0267c750a1bd97ee", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]    Compiling find-msvc-tools v0.1.4
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]     Checking zlib-rs v0.5.5
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ecfb9d8d)
[INFO] [stderr]     Checking jiff v0.2.16
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]     Checking env_filter v0.1.4
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr] error: failed to run custom build command for `lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ecfb9d8d)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/lib_wfa2-3b99c5cd7cf8bf66/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (129) panicked at /opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/build.rs:177:9:
[INFO] [stderr]   Failed to build WFA2-lib: Make failed:
[INFO] [stderr]   STDOUT:
[INFO] [stderr]   rm -rf bin build lib 2> /dev/null
[INFO] [stderr]   make --directory=tools/align_benchmark clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   rm -rf ./build
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   make --directory=examples clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/examples'
[INFO] [stderr]   rm -rf bin
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/examples'
[INFO] [stderr]   rm -rf tests/*.alg tests/*.log* 2> /dev/null
[INFO] [stderr] 
[INFO] [stderr]   STDERR:
[INFO] [stderr]   mkdir: cannot create directory 'bin': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'lib': Read-only file system
[INFO] [stderr]   make: *** [Makefile:70: setup] Error 1
[INFO] [stderr] 
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x60d3a0d81d32 - std[6befdd0ffd1013d7]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x60d3a0d81d32 - std[6befdd0ffd1013d7]::backtrace_rs::backtrace::trace_unsynchronized::<std[6befdd0ffd1013d7]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x60d3a0d81d32 - std[6befdd0ffd1013d7]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x60d3a0d81d32 - <<std[6befdd0ffd1013d7]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[80d175bc8be2affd]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x60d3a0d93bf7 - <core[80d175bc8be2affd]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x60d3a0d93bf7 - core[80d175bc8be2affd]::fmt::write
[INFO] [stderr]      6:     0x60d3a0d86636 - std[6befdd0ffd1013d7]::io::default_write_fmt::<std[6befdd0ffd1013d7]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/io/mod.rs:614:11
[INFO] [stderr]      7:     0x60d3a0d86636 - <std[6befdd0ffd1013d7]::sys::stdio::unix::Stderr as std[6befdd0ffd1013d7]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/io/mod.rs:1969:13
[INFO] [stderr]      8:     0x60d3a0d658bf - <std[6befdd0ffd1013d7]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x60d3a0d658bf - std[6befdd0ffd1013d7]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x60d3a0d7d821 - std[6befdd0ffd1013d7]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x60d3a0d7d9db - std[6befdd0ffd1013d7]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:825:13
[INFO] [stderr]     12:     0x60d3a0d65978 - std[6befdd0ffd1013d7]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:698:13
[INFO] [stderr]     13:     0x60d3a0d5aa49 - std[6befdd0ffd1013d7]::sys::backtrace::__rust_end_short_backtrace::<std[6befdd0ffd1013d7]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x60d3a0d6637d - __rustc[d8d64968b6079d54]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:689:5
[INFO] [stderr]     15:     0x60d3a0d9423c - core[80d175bc8be2affd]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x60d3a0d4b7e9 - build_script_build[82c8507ebb0887c8]::main
[INFO] [stderr]     17:     0x60d3a0d4e223 - <fn() as core[80d175bc8be2affd]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     18:     0x60d3a0d44a26 - std[6befdd0ffd1013d7]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     19:     0x60d3a0d4ad09 - std[6befdd0ffd1013d7]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     20:     0x60d3a0d7c9d6 - <&dyn core[80d175bc8be2affd]::ops::function::Fn<(), Output = i32> + core[80d175bc8be2affd]::marker::Sync + core[80d175bc8be2affd]::panic::unwind_safe::RefUnwindSafe as core[80d175bc8be2affd]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     21:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panicking::catch_unwind::do_call::<&dyn core[80d175bc8be2affd]::ops::function::Fn<(), Output = i32> + core[80d175bc8be2affd]::marker::Sync + core[80d175bc8be2affd]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:581:40
[INFO] [stderr]     22:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panicking::catch_unwind::<i32, &dyn core[80d175bc8be2affd]::ops::function::Fn<(), Output = i32> + core[80d175bc8be2affd]::marker::Sync + core[80d175bc8be2affd]::panic::unwind_safe::RefUnwindSafe>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:544:19
[INFO] [stderr]     23:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panic::catch_unwind::<&dyn core[80d175bc8be2affd]::ops::function::Fn<(), Output = i32> + core[80d175bc8be2affd]::marker::Sync + core[80d175bc8be2affd]::panic::unwind_safe::RefUnwindSafe, i32>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panic.rs:359:14
[INFO] [stderr]     24:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/rt.rs:175:24
[INFO] [stderr]     25:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panicking::catch_unwind::do_call::<std[6befdd0ffd1013d7]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:581:40
[INFO] [stderr]     26:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panicking::catch_unwind::<isize, std[6befdd0ffd1013d7]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panicking.rs:544:19
[INFO] [stderr]     27:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::panic::catch_unwind::<std[6befdd0ffd1013d7]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/panic.rs:359:14
[INFO] [stderr]     28:     0x60d3a0d7c9d6 - std[6befdd0ffd1013d7]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/f2c70877a7dbc51cd98e2d5d25209b24d4a586d5/library/std/src/rt.rs:171:5
[INFO] [stderr]     29:     0x60d3a0d499f1 - std[6befdd0ffd1013d7]::rt::lang_start::<()>
[INFO] [stderr]     30:     0x60d3a0d4e565 - main
[INFO] [stderr]     31:     0x70864711e1ca - <unknown>
[INFO] [stderr]     32:     0x70864711e28b - __libc_start_main
[INFO] [stderr]     33:     0x60d3a0d437b5 - _start
[INFO] [stderr]     34:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "168ca5af7a9c58fff0213cd5d5d7bb07f219d46a5c66f0ba0267c750a1bd97ee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "168ca5af7a9c58fff0213cd5d5d7bb07f219d46a5c66f0ba0267c750a1bd97ee", kill_on_drop: false }`
[INFO] [stdout] 168ca5af7a9c58fff0213cd5d5d7bb07f219d46a5c66f0ba0267c750a1bd97ee
