[INFO] cloning repository https://github.com/JakeKalstad/HumanGenomeAtlasParser [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/JakeKalstad/HumanGenomeAtlasParser" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJakeKalstad%2FHumanGenomeAtlasParser", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJakeKalstad%2FHumanGenomeAtlasParser'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 1590a79e7e4456b7994fb4de2197c60c6fb1c2a7 [INFO] building JakeKalstad/HumanGenomeAtlasParser against try#58b1b3c5342a414c161338871f8004258ccef2a7 for pr-149937 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FJakeKalstad%2FHumanGenomeAtlasParser" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/JakeKalstad/HumanGenomeAtlasParser [INFO] finished tweaking git repo https://github.com/JakeKalstad/HumanGenomeAtlasParser [INFO] tweaked toml for git repo https://github.com/JakeKalstad/HumanGenomeAtlasParser written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/JakeKalstad/HumanGenomeAtlasParser on toolchain 58b1b3c5342a414c161338871f8004258ccef2a7 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+58b1b3c5342a414c161338871f8004258ccef2a7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/JakeKalstad/HumanGenomeAtlasParser already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+58b1b3c5342a414c161338871f8004258ccef2a7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded dtoa-short v0.3.4 [INFO] [stderr] Downloaded dtoa v1.0.6 [INFO] [stderr] Downloaded openssl-sys v0.9.90 [INFO] [stderr] Downloaded openssl v0.10.55 [INFO] [stderr] Downloaded rustix v0.37.21 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+58b1b3c5342a414c161338871f8004258ccef2a7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c76838c40d6a0a187b384b9c714f512672cf425face2cde3a5c9df2210658a91 [INFO] running `Command { std: "docker" "start" "-a" "c76838c40d6a0a187b384b9c714f512672cf425face2cde3a5c9df2210658a91", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c76838c40d6a0a187b384b9c714f512672cf425face2cde3a5c9df2210658a91", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c76838c40d6a0a187b384b9c714f512672cf425face2cde3a5c9df2210658a91", kill_on_drop: false }` [INFO] [stdout] c76838c40d6a0a187b384b9c714f512672cf425face2cde3a5c9df2210658a91 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+58b1b3c5342a414c161338871f8004258ccef2a7" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 495c038942db1936a28a77439aceb65eab7306302c9fc2432170bd7c0e47480d [INFO] running `Command { std: "docker" "start" "-a" "495c038942db1936a28a77439aceb65eab7306302c9fc2432170bd7c0e47480d", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.63 [INFO] [stderr] Compiling unicode-ident v1.0.9 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling once_cell v1.18.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling pin-project-lite v0.2.10 [INFO] [stderr] Compiling bytes v1.4.0 [INFO] [stderr] Compiling futures-core v0.3.28 [INFO] [stderr] Compiling serde v1.0.164 [INFO] [stderr] Compiling jobserver v0.1.26 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling getrandom v0.2.10 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Compiling tokio v1.29.1 [INFO] [stderr] Compiling log v0.4.19 [INFO] [stderr] Compiling itoa v1.0.6 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling mio v0.8.8 [INFO] [stderr] Compiling cc v1.0.79 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling socket2 v0.4.9 [INFO] [stderr] Compiling lock_api v0.4.10 [INFO] [stderr] Compiling slab v0.4.8 [INFO] [stderr] Compiling parking_lot_core v0.9.8 [INFO] [stderr] Compiling futures-task v0.3.28 [INFO] [stderr] Compiling tracing-core v0.1.31 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling futures-util v0.3.28 [INFO] [stderr] Compiling openssl v0.10.55 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling crypto-common v0.1.6 [INFO] [stderr] Compiling quote v1.0.29 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling block-buffer v0.10.4 [INFO] [stderr] Compiling tracing v0.1.37 [INFO] [stderr] Compiling http v0.2.9 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling syn v2.0.22 [INFO] [stderr] Compiling futures-channel v0.3.28 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling cpufeatures v0.2.8 [INFO] [stderr] Compiling futures-io v0.3.28 [INFO] [stderr] Compiling native-tls v0.2.11 [INFO] [stderr] Compiling futures-sink v0.3.28 [INFO] [stderr] Compiling parking_lot v0.12.1 [INFO] [stderr] Compiling dtoa v1.0.6 [INFO] [stderr] Compiling try-lock v0.2.4 [INFO] [stderr] Compiling zstd-safe v5.0.2+zstd.1.5.2 [INFO] [stderr] Compiling percent-encoding v2.3.0 [INFO] [stderr] Compiling dtoa-short v0.3.4 [INFO] [stderr] Compiling want v0.3.1 [INFO] [stderr] Compiling inout v0.1.3 [INFO] [stderr] Compiling openssl-sys v0.9.90 [INFO] [stderr] Compiling zstd-sys v2.0.8+zstd.1.5.5 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling form_urlencoded v1.2.0 [INFO] [stderr] Compiling unicode-bidi v0.3.13 [INFO] [stderr] Compiling ryu v1.0.13 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling phf_generator v0.10.0 [INFO] [stderr] Compiling string_cache_codegen v0.5.2 [INFO] [stderr] Compiling http-body v0.4.5 [INFO] [stderr] Compiling selectors v0.22.0 [INFO] [stderr] Compiling base64ct v1.6.0 [INFO] [stderr] Compiling httpdate v1.0.2 [INFO] [stderr] Compiling tower-service v0.3.2 [INFO] [stderr] Compiling cipher v0.4.4 [INFO] [stderr] Compiling sha2 v0.10.7 [INFO] [stderr] Compiling idna v0.4.0 [INFO] [stderr] Compiling hmac v0.12.1 [INFO] [stderr] Compiling time-core v0.1.1 [INFO] [stderr] Compiling password-hash v0.4.2 [INFO] [stderr] Compiling markup5ever v0.10.1 [INFO] [stderr] Compiling getopts v0.2.21 [INFO] [stderr] Compiling time v0.3.22 [INFO] [stderr] Compiling aes v0.8.3 [INFO] [stderr] Compiling flate2 v1.0.26 [INFO] [stderr] Compiling url v2.4.0 [INFO] [stderr] Compiling pbkdf2 v0.11.0 [INFO] [stderr] Compiling sha1 v0.10.5 [INFO] [stderr] Compiling encoding_rs v0.8.32 [INFO] [stderr] Compiling ipnet v2.8.0 [INFO] [stderr] Compiling base64 v0.21.2 [INFO] [stderr] Compiling string_cache v0.8.7 [INFO] [stderr] Compiling serde_urlencoded v0.7.1 [INFO] [stderr] Compiling csv v1.2.2 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling openssl-macros v0.1.1 [INFO] [stderr] Compiling cssparser-macros v0.6.1 [INFO] [stderr] Compiling serde_derive v1.0.164 [INFO] [stderr] Compiling tokio-util v0.7.8 [INFO] [stderr] Compiling phf_macros v0.8.0 [INFO] [stderr] Compiling cssparser v0.27.2 [INFO] [stderr] Compiling html5ever v0.25.2 [INFO] [stderr] Compiling derive_more v0.99.17 [INFO] [stderr] Compiling h2 v0.3.20 [INFO] [stderr] Compiling phf v0.8.0 [INFO] [stderr] Compiling tokio-native-tls v0.3.1 [INFO] [stderr] Compiling zstd v0.11.2+zstd.1.5.2 [INFO] [stderr] Compiling zip v0.6.6 [INFO] [stderr] Compiling scraper v0.12.0 [INFO] [stderr] Compiling hyper v0.14.27 [INFO] [stderr] Compiling hyper-tls v0.5.0 [INFO] [stderr] Compiling reqwest v0.11.18 [INFO] [stderr] Compiling genome-rs v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `fs` [INFO] [stdout] --> src/main.rs:3:16 [INFO] [stdout] | [INFO] [stdout] 3 | use std::{env, fs}; [INFO] [stdout] | ^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `get_records` is never used [INFO] [stdout] --> src/main.rs:13:4 [INFO] [stdout] | [INFO] [stdout] 13 | fn get_records() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `get_pathogens` is never used [INFO] [stdout] --> src/main.rs:25:4 [INFO] [stdout] | [INFO] [stdout] 25 | fn get_pathogens() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `get_rna_immune_cell_monaco` is never used [INFO] [stdout] --> src/main.rs:38:4 [INFO] [stdout] | [INFO] [stdout] 38 | fn get_rna_immune_cell_monaco() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_mouse_brain_hpa` is never used [INFO] [stdout] --> src/main.rs:51:4 [INFO] [stdout] | [INFO] [stdout] 51 | fn rna_mouse_brain_hpa() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_mouse_brain_allen` is never used [INFO] [stdout] --> src/main.rs:64:4 [INFO] [stdout] | [INFO] [stdout] 64 | fn rna_mouse_brain_allen() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_immune_cell_sample` is never used [INFO] [stdout] --> src/main.rs:77:4 [INFO] [stdout] | [INFO] [stdout] 77 | fn rna_immune_cell_sample() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_immune_cell` is never used [INFO] [stdout] --> src/main.rs:90:4 [INFO] [stdout] | [INFO] [stdout] 90 | fn rna_immune_cell() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_celline_cancer` is never used [INFO] [stdout] --> src/main.rs:103:4 [INFO] [stdout] | [INFO] [stdout] 103 | fn rna_celline_cancer() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `get_rna_immune_cell_schmiedel` is never used [INFO] [stdout] --> src/main.rs:116:4 [INFO] [stdout] | [INFO] [stdout] 116 | fn get_rna_immune_cell_schmiedel() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_mouse_brain_sample_hpa` is never used [INFO] [stdout] --> src/main.rs:129:4 [INFO] [stdout] | [INFO] [stdout] 129 | fn rna_mouse_brain_sample_hpa() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `rna_pig_brain_sample_hpa` is never used [INFO] [stdout] --> src/main.rs:142:4 [INFO] [stdout] | [INFO] [stdout] 142 | fn rna_pig_brain_sample_hpa() -> Vec { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 41.77s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: openssl v0.10.55 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 3` [INFO] running `Command { std: "docker" "inspect" "495c038942db1936a28a77439aceb65eab7306302c9fc2432170bd7c0e47480d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "495c038942db1936a28a77439aceb65eab7306302c9fc2432170bd7c0e47480d", kill_on_drop: false }` [INFO] [stdout] 495c038942db1936a28a77439aceb65eab7306302c9fc2432170bd7c0e47480d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+58b1b3c5342a414c161338871f8004258ccef2a7" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4f640e26233087aaa4f8c917ec7df8e4e4251ce7ec3a412682881189bb2e18a5 [INFO] running `Command { std: "docker" "start" "-a" "4f640e26233087aaa4f8c917ec7df8e4e4251ce7ec3a412682881189bb2e18a5", kill_on_drop: false }` [INFO] [stderr] Compiling genome-rs v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `fs` [INFO] [stdout] --> src/main.rs:3:16 [INFO] [stdout] | [INFO] [stdout] 3 | use std::{env, fs}; [INFO] [stdout] | ^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.03s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: openssl v0.10.55 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 3` [INFO] running `Command { std: "docker" "inspect" "4f640e26233087aaa4f8c917ec7df8e4e4251ce7ec3a412682881189bb2e18a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4f640e26233087aaa4f8c917ec7df8e4e4251ce7ec3a412682881189bb2e18a5", kill_on_drop: false }` [INFO] [stdout] 4f640e26233087aaa4f8c917ec7df8e4e4251ce7ec3a412682881189bb2e18a5