[INFO] fetching crate exon-sam 0.32.4...
[INFO] building exon-sam-0.32.4 against master#eb171a227f9e5de5d376b6edb56b174bc8235fb3 for pr-149937
[INFO] extracting crate exon-sam 0.32.4 into /workspace/builds/worker-2-tc1/source
[INFO] started tweaking crates.io crate exon-sam 0.32.4
[INFO] finished tweaking crates.io crate exon-sam 0.32.4
[INFO] tweaked toml for crates.io crate exon-sam 0.32.4 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate exon-sam 0.32.4 on toolchain eb171a227f9e5de5d376b6edb56b174bc8235fb3
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 288 packages to latest compatible versions
[INFO] [stderr]       Adding arrow v53.4.1 (available: v57.1.0)
[INFO] [stderr]       Adding async-compression v0.4.19 (available: v0.4.36)
[INFO] [stderr]       Adding chrono v0.4.39 (available: v0.4.42)
[INFO] [stderr]       Adding generic-array v0.14.7 (available: v0.14.9)
[INFO] [stderr]       Adding noodles v0.86.0 (available: v0.104.0)
[INFO] [stderr]       Adding object_store v0.11.2 (available: v0.13.0)
[INFO] [stderr]       Adding zstd-safe v7.2.1 (available: v7.2.4)
[INFO] [stderr]       Adding zstd-sys v2.0.13+zstd.1.5.6 (available: v2.0.16+zstd.1.5.7)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles v0.86.0
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded noodles-csi v0.41.0
[INFO] [stderr]   Downloaded datafusion-physical-optimizer v43.0.0
[INFO] [stderr]   Downloaded exon-common v0.32.4
[INFO] [stderr]   Downloaded snafu v0.8.9
[INFO] [stderr]   Downloaded noodles-fastq v0.16.0
[INFO] [stderr]   Downloaded datafusion-physical-expr-common v43.0.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.34.0
[INFO] [stderr]   Downloaded datafusion-functions-window v43.0.0
[INFO] [stderr]   Downloaded noodles-tabix v0.47.0
[INFO] [stderr]   Downloaded arrow-string v53.4.1
[INFO] [stderr]   Downloaded noodles-sam v0.67.0
[INFO] [stderr]   Downloaded datafusion-functions-window-common v43.0.0
[INFO] [stderr]   Downloaded datafusion-functions-aggregate-common v43.0.0
[INFO] [stderr]   Downloaded sqlparser_derive v0.2.2
[INFO] [stderr]   Downloaded snafu-derive v0.8.9
[INFO] [stderr]   Downloaded datafusion-common-runtime v43.0.0
[INFO] [stderr]   Downloaded datafusion-catalog v43.0.0
[INFO] [stderr]   Downloaded noodles-gff v0.40.0
[INFO] [stderr]   Downloaded arrow-ord v53.4.1
[INFO] [stderr]   Downloaded arrow-row v53.4.1
[INFO] [stderr]   Downloaded noodles-fasta v0.46.0
[INFO] [stderr]   Downloaded datafusion-execution v43.0.0
[INFO] [stderr]   Downloaded arrow-arith v53.4.1
[INFO] [stderr]   Downloaded arrow-data v53.4.1
[INFO] [stderr]   Downloaded arrow-csv v53.4.1
[INFO] [stderr]   Downloaded arrow-schema v53.4.1
[INFO] [stderr]   Downloaded datafusion-functions-nested v43.0.0
[INFO] [stderr]   Downloaded arrow-select v53.4.1
[INFO] [stderr]   Downloaded datafusion-expr-common v43.0.0
[INFO] [stderr]   Downloaded arrow-json v53.4.1
[INFO] [stderr]   Downloaded arrow-cast v53.4.1
[INFO] [stderr]   Downloaded arrow v53.4.1
[INFO] [stderr]   Downloaded datafusion-functions-aggregate v43.0.0
[INFO] [stderr]   Downloaded arrow-ipc v53.4.1
[INFO] [stderr]   Downloaded noodles-bam v0.71.0
[INFO] [stderr]   Downloaded datafusion-common v43.0.0
[INFO] [stderr]   Downloaded noodles-cram v0.72.0
[INFO] [stderr]   Downloaded datafusion-functions v43.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr v43.0.0
[INFO] [stderr]   Downloaded datafusion-expr v43.0.0
[INFO] [stderr]   Downloaded datafusion-optimizer v43.0.0
[INFO] [stderr]   Downloaded arrow-array v53.4.1
[INFO] [stderr]   Downloaded sqlparser v0.51.0
[INFO] [stderr]   Downloaded datafusion-sql v43.0.0
[INFO] [stderr]   Downloaded noodles-vcf v0.69.0
[INFO] [stderr]   Downloaded noodles-bcf v0.65.0
[INFO] [stderr]   Downloaded arrow-buffer v53.4.1
[INFO] [stderr]   Downloaded datafusion-physical-plan v43.0.0
[INFO] [stderr]   Downloaded datafusion v43.0.0
[INFO] [stderr]   Downloaded parquet v53.4.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ecaf73702c9eaf735e94d4055ba42261b576672ddd3123c368d057c0f4f8b577
[INFO] running `Command { std: "docker" "start" "-a" "ecaf73702c9eaf735e94d4055ba42261b576672ddd3123c368d057c0f4f8b577", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ecaf73702c9eaf735e94d4055ba42261b576672ddd3123c368d057c0f4f8b577", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ecaf73702c9eaf735e94d4055ba42261b576672ddd3123c368d057c0f4f8b577", kill_on_drop: false }`
[INFO] [stdout] ecaf73702c9eaf735e94d4055ba42261b576672ddd3123c368d057c0f4f8b577
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2d876fd97747a4e2f4e835d8ed4a3a24ecb0c30677f41bb7c391c4e7118343df
[INFO] running `Command { std: "docker" "start" "-a" "2d876fd97747a4e2f4e835d8ed4a3a24ecb0c30677f41bb7c391c4e7118343df", kill_on_drop: false }`
[INFO] [stderr]    Compiling zerocopy v0.8.31
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling zerocopy-derive v0.8.31
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-bigint v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.45
[INFO] [stderr]    Compiling chrono v0.4.39
[INFO] [stderr]    Compiling phf_shared v0.12.1
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling chrono-tz v0.10.4
[INFO] [stderr]    Compiling phf v0.12.1
[INFO] [stderr]    Compiling arrow-schema v53.4.1
[INFO] [stderr]    Compiling hashbrown v0.15.5
[INFO] [stderr]    Compiling tokio-macros v2.6.0
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling tokio v1.48.0
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling futures-channel v0.3.31
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling lexical-core v1.0.6
[INFO] [stderr]    Compiling futures-util v0.3.31
[INFO] [stderr]    Compiling num v0.4.3
[INFO] [stderr]    Compiling zstd-sys v2.0.13+zstd.1.5.6
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling comfy-table v7.2.1
[INFO] [stderr]    Compiling atoi v2.0.0
[INFO] [stderr]    Compiling icu_normalizer v2.1.1
[INFO] [stderr]    Compiling flatbuffers v24.12.23
[INFO] [stderr]    Compiling zstd-safe v7.2.1
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling twox-hash v2.1.2
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling lz4_flex v0.11.5
[INFO] [stderr]    Compiling half v2.7.1
[INFO] [stderr]    Compiling snafu-derive v0.8.9
[INFO] [stderr]    Compiling arrow-buffer v53.4.1
[INFO] [stderr]    Compiling tracing-attributes v0.1.31
[INFO] [stderr]    Compiling futures-executor v0.3.31
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling arrow-data v53.4.1
[INFO] [stderr]    Compiling futures v0.3.31
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]    Compiling serde_json v1.0.147
[INFO] [stderr]    Compiling csv v1.4.0
[INFO] [stderr]    Compiling tracing v0.1.44
[INFO] [stderr]    Compiling url v2.5.7
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling ordered-float v2.10.1
[INFO] [stderr]    Compiling snafu v0.8.9
[INFO] [stderr]    Compiling integer-encoding v3.0.4
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling thrift v0.17.0
[INFO] [stderr]    Compiling object_store v0.11.2
[INFO] [stderr]    Compiling twox-hash v1.6.3
[INFO] [stderr]    Compiling brotli v7.0.0
[INFO] [stderr]    Compiling sqlparser_derive v0.2.2
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling sqlparser v0.51.0
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling arrow-array v53.4.1
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling dashmap v6.1.0
[INFO] [stderr]    Compiling tokio-util v0.7.17
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling blake3 v1.8.2
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling datafusion-common-runtime v43.0.0
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling arrow-select v53.4.1
[INFO] [stderr]    Compiling arrow-row v53.4.1
[INFO] [stderr]    Compiling arrow-arith v53.4.1
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling arrow-cast v53.4.1
[INFO] [stderr]    Compiling arrow-string v53.4.1
[INFO] [stderr]    Compiling arrow-ord v53.4.1
[INFO] [stderr]    Compiling noodles-core v0.15.0
[INFO] [stderr]    Compiling noodles-bgzf v0.34.0
[INFO] [stderr]    Compiling arrow-ipc v53.4.1
[INFO] [stderr]    Compiling arrow-json v53.4.1
[INFO] [stderr]    Compiling arrow-csv v53.4.1
[INFO] [stderr]    Compiling blake2 v0.10.6
[INFO] [stderr]    Compiling parquet v53.4.1
[INFO] [stderr]    Compiling arrow v53.4.1
[INFO] [stderr]    Compiling uuid v1.19.0
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling noodles-csi v0.41.0
[INFO] [stderr]    Compiling bzip2 v0.5.2
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling async-compression v0.4.19
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]    Compiling noodles-sam v0.67.0
[INFO] [stderr]    Compiling noodles-bam v0.71.0
[INFO] [stderr]    Compiling noodles v0.86.0
[INFO] [stderr]    Compiling datafusion-common v43.0.0
[INFO] [stderr]    Compiling datafusion-expr-common v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-expr-common v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-window-common v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-aggregate-common v43.0.0
[INFO] [stderr]    Compiling datafusion-expr v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-expr v43.0.0
[INFO] [stderr]    Compiling datafusion-execution v43.0.0
[INFO] [stderr]    Compiling datafusion-sql v43.0.0
[INFO] [stderr]    Compiling datafusion-functions v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-plan v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-aggregate v43.0.0
[INFO] [stderr]    Compiling datafusion-optimizer v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-window v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-nested v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-optimizer v43.0.0
[INFO] [stderr]    Compiling datafusion-catalog v43.0.0
[INFO] [stderr]    Compiling datafusion v43.0.0
[INFO] [stderr]    Compiling exon-common v0.32.4
[INFO] [stderr]    Compiling exon-sam v0.32.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 6m 52s
[INFO] running `Command { std: "docker" "inspect" "2d876fd97747a4e2f4e835d8ed4a3a24ecb0c30677f41bb7c391c4e7118343df", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2d876fd97747a4e2f4e835d8ed4a3a24ecb0c30677f41bb7c391c4e7118343df", kill_on_drop: false }`
[INFO] [stdout] 2d876fd97747a4e2f4e835d8ed4a3a24ecb0c30677f41bb7c391c4e7118343df
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+eb171a227f9e5de5d376b6edb56b174bc8235fb3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b576c01c37b83a8074a20722ea5e426c4c9b008fc7b5afe6a5c3d32a673727a5
[INFO] running `Command { std: "docker" "start" "-a" "b576c01c37b83a8074a20722ea5e426c4c9b008fc7b5afe6a5c3d32a673727a5", kill_on_drop: false }`
[INFO] [stderr]    Compiling exon-sam v0.32.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 8.36s
[INFO] running `Command { std: "docker" "inspect" "b576c01c37b83a8074a20722ea5e426c4c9b008fc7b5afe6a5c3d32a673727a5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b576c01c37b83a8074a20722ea5e426c4c9b008fc7b5afe6a5c3d32a673727a5", kill_on_drop: false }`
[INFO] [stdout] b576c01c37b83a8074a20722ea5e426c4c9b008fc7b5afe6a5c3d32a673727a5
