[INFO] cloning repository https://github.com/MiguelAMeloM/rustnome
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MiguelAMeloM/rustnome" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 82286a1b94e122f3f7a4934fd09541af4dc13480
[INFO] testing MiguelAMeloM/rustnome against master#2fd6efc32704647e64d3d646d21c4c68eae100e4 for pr-149852-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/MiguelAMeloM/rustnome
[INFO] finished tweaking git repo https://github.com/MiguelAMeloM/rustnome
[INFO] tweaked toml for git repo https://github.com/MiguelAMeloM/rustnome written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/MiguelAMeloM/rustnome on toolchain 2fd6efc32704647e64d3d646d21c4c68eae100e4
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/MiguelAMeloM/rustnome already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] fecf7da02389f712f5ac6cb9a5ccdf7f85954ee8ec35ae68df015c16d6f84943
[INFO] running `Command { std: "docker" "start" "-a" "fecf7da02389f712f5ac6cb9a5ccdf7f85954ee8ec35ae68df015c16d6f84943", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fecf7da02389f712f5ac6cb9a5ccdf7f85954ee8ec35ae68df015c16d6f84943", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fecf7da02389f712f5ac6cb9a5ccdf7f85954ee8ec35ae68df015c16d6f84943", kill_on_drop: false }`
[INFO] [stdout] fecf7da02389f712f5ac6cb9a5ccdf7f85954ee8ec35ae68df015c16d6f84943
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9dddc9d244ab8adc5be1747fe8b8f34945accaf2d0dd6eed182896352541259d
[INFO] running `Command { std: "docker" "start" "-a" "9dddc9d244ab8adc5be1747fe8b8f34945accaf2d0dd6eed182896352541259d", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.19s
[INFO] running `Command { std: "docker" "inspect" "9dddc9d244ab8adc5be1747fe8b8f34945accaf2d0dd6eed182896352541259d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9dddc9d244ab8adc5be1747fe8b8f34945accaf2d0dd6eed182896352541259d", kill_on_drop: false }`
[INFO] [stdout] 9dddc9d244ab8adc5be1747fe8b8f34945accaf2d0dd6eed182896352541259d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9b9794f407cf69436b12b7d6c415ff4f0ea6b1ac2e7ef4fc2802e6bc10107a2b
[INFO] running `Command { std: "docker" "start" "-a" "9b9794f407cf69436b12b7d6c415ff4f0ea6b1ac2e7ef4fc2802e6bc10107a2b", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s
[INFO] running `Command { std: "docker" "inspect" "9b9794f407cf69436b12b7d6c415ff4f0ea6b1ac2e7ef4fc2802e6bc10107a2b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9b9794f407cf69436b12b7d6c415ff4f0ea6b1ac2e7ef4fc2802e6bc10107a2b", kill_on_drop: false }`
[INFO] [stdout] 9b9794f407cf69436b12b7d6c415ff4f0ea6b1ac2e7ef4fc2802e6bc10107a2b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+2fd6efc32704647e64d3d646d21c4c68eae100e4" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] c7aa80af90ef6d3f0ce487a391d16c3f02a6cf7f66d6ecea347e233bc76dc25b
[INFO] running `Command { std: "docker" "start" "-a" "c7aa80af90ef6d3f0ce487a391d16c3f02a6cf7f66d6ecea347e233bc76dc25b", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.01s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rustome-1a2c1f6c4d9af429)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rustome
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73) ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73) stdout ----
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:31
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                               ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:40
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                                        ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:49
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                                                 ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:31
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                               ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:40
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                                        ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `DNuc`
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:49
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                                                 ^^^^ use of undeclared type `DNuc`
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this enum
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::sequences::DNuc;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: failed to resolve: use of undeclared type `Scoring`
[INFO] [stdout]   --> src/upgma/algorithm.rs:78:15
[INFO] [stdout]    |
[INFO] [stdout] 78 | let scoring = Scoring::default();
[INFO] [stdout]    |               ^^^^^^^ use of undeclared type `Scoring`
[INFO] [stdout]    |
[INFO] [stdout] help: a struct with a similar name exists
[INFO] [stdout]    |
[INFO] [stdout] 78 - let scoring = Scoring::default();
[INFO] [stdout] 78 + let scoring = String::default();
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this struct
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::alignment::Scoring;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0425]: cannot find function `create_tree` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:79:12
[INFO] [stdout]    |
[INFO] [stdout] 79 | let tree = create_tree(sequences, scoring);
[INFO] [stdout]    |            ^^^^^^^^^^^ not found in this scope
[INFO] [stdout]    |
[INFO] [stdout] help: consider importing this function
[INFO] [stdout]    |
[INFO] [stdout] 73 + use rustome::upgma::algorithm::create_tree;
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 8 previous errors
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0425, E0433.
[INFO] [stdout] For more information about an error, try `rustc --explain E0425`.
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s
[INFO] [stdout] 
[INFO] [stdout] all doctests ran in 0.13s; merged doctests compilation took 0.07s
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "c7aa80af90ef6d3f0ce487a391d16c3f02a6cf7f66d6ecea347e233bc76dc25b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c7aa80af90ef6d3f0ce487a391d16c3f02a6cf7f66d6ecea347e233bc76dc25b", kill_on_drop: false }`
[INFO] [stdout] c7aa80af90ef6d3f0ce487a391d16c3f02a6cf7f66d6ecea347e233bc76dc25b
