[INFO] cloning repository https://github.com/tkob-vh/umi-collapse-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/tkob-vh/umi-collapse-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 3f279b5075ddc97afd887dbdff610d65953170d1 [INFO] checking tkob-vh/umi-collapse-rs/3f279b5075ddc97afd887dbdff610d65953170d1 against master#da2544bfbe84df7b24d83c029c74299ebf6112c6 for pr-149681 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-3-tc1/source/.cargo/config.toml [INFO] removed /workspace/builds/worker-3-tc1/source/rust-toolchain.toml [INFO] started tweaking git repo https://github.com/tkob-vh/umi-collapse-rs [INFO] finished tweaking git repo https://github.com/tkob-vh/umi-collapse-rs [INFO] tweaked toml for git repo https://github.com/tkob-vh/umi-collapse-rs written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/tkob-vh/umi-collapse-rs on toolchain da2544bfbe84df7b24d83c029c74299ebf6112c6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+da2544bfbe84df7b24d83c029c74299ebf6112c6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/tkob-vh/umi-collapse-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+da2544bfbe84df7b24d83c029c74299ebf6112c6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded pcre2 v0.2.9 [INFO] [stderr] Downloaded clap v4.5.37 [INFO] [stderr] Downloaded rust-htslib v0.49.0 [INFO] [stderr] Downloaded clap_builder v4.5.37 [INFO] [stderr] Downloaded pcre2-sys v0.2.9 [INFO] [stderr] Downloaded curl-sys v0.4.80+curl-8.12.1 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.5.0+3.5.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+da2544bfbe84df7b24d83c029c74299ebf6112c6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5320236b7c58b25338f1b377fe5c151e63b034e7f35972a4c17a47a8ccc25e24 [INFO] running `Command { std: "docker" "start" "-a" "5320236b7c58b25338f1b377fe5c151e63b034e7f35972a4c17a47a8ccc25e24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5320236b7c58b25338f1b377fe5c151e63b034e7f35972a4c17a47a8ccc25e24", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5320236b7c58b25338f1b377fe5c151e63b034e7f35972a4c17a47a8ccc25e24", kill_on_drop: false }` [INFO] [stdout] 5320236b7c58b25338f1b377fe5c151e63b034e7f35972a4c17a47a8ccc25e24 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:845e597a41426bbf2703be69acdb67d10b6de511142d05cba7bbe119c898b2c7" "/opt/rustwide/cargo-home/bin/cargo" "+da2544bfbe84df7b24d83c029c74299ebf6112c6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9c2a83c4557f2b87d898718fc28cf63879b2c5786f4041a445c32f61ec1f2c32 [INFO] running `Command { std: "docker" "start" "-a" "9c2a83c4557f2b87d898718fc28cf63879b2c5786f4041a445c32f61ec1f2c32", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Checking litemap v0.7.5 [INFO] [stderr] Compiling libc v0.2.172 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling icu_locid_transform_data v1.5.1 [INFO] [stderr] Compiling icu_properties_data v1.5.1 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling icu_normalizer_data v1.5.1 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling libloading v0.8.6 [INFO] [stderr] Compiling either v1.15.0 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Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling openssl-src v300.5.0+3.5.0 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling openssl-sys v0.9.108 [INFO] [stderr] Compiling curl-sys v0.4.80+curl-8.12.1 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling pcre2-sys v0.2.9 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Checking pcre2 v0.2.9 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Checking zerofrom v0.1.6 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Checking yoke v0.7.5 [INFO] [stderr] Checking zerovec v0.10.4 [INFO] [stderr] Compiling tracing-attributes v0.1.28 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Compiling clap_derive v4.5.32 [INFO] [stderr] Checking thiserror v2.0.12 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Checking tinystr v0.7.6 [INFO] [stderr] Checking icu_collections v1.5.0 [INFO] [stderr] Checking icu_locid v1.5.0 [INFO] [stderr] Checking tracing v0.1.41 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking icu_provider v1.5.0 [INFO] [stderr] Checking icu_locid_transform v1.5.0 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Checking clap v4.5.37 [INFO] [stderr] Checking icu_properties v1.5.1 [INFO] [stderr] Checking icu_normalizer v1.5.0 [INFO] [stderr] Checking idna_adapter v1.2.0 [INFO] [stderr] Checking idna v1.0.3 [INFO] [stderr] Checking url v2.5.4 [INFO] [stderr] Checking rust-htslib v0.49.0 [INFO] [stderr] Checking umicollapse v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: struct `Combo` is never constructed [INFO] [stdout] --> src/data/combo.rs:10:12 [INFO] [stdout] | [INFO] [stdout] 10 | pub struct Combo<'bitset> { [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `recursive_remove_near` is never used [INFO] [stdout] --> src/data/combo.rs:18:8 [INFO] [stdout] | [INFO] [stdout] 17 | impl<'a> Combo<'a> { [INFO] [stdout] | ------------------ method in this implementation [INFO] [stdout] 18 | fn recursive_remove_near( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/utils/cluster_tracker.rs:110:22 [INFO] [stdout] | [INFO] [stdout] 110 | pub fn get_stats(&self, id: usize) -> &ClusterStats { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^ [INFO] [stdout] | | || [INFO] [stdout] | | |the same lifetime is hidden here [INFO] [stdout] | | the same lifetime is elided here [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 110 | pub fn get_stats(&self, id: usize) -> &ClusterStats<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `Combo` is never constructed [INFO] [stdout] --> src/data/combo.rs:10:12 [INFO] [stdout] | [INFO] [stdout] 10 | pub struct Combo<'bitset> { [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `recursive_remove_near` is never used [INFO] [stdout] --> src/data/combo.rs:18:8 [INFO] [stdout] | [INFO] [stdout] 17 | impl<'a> Combo<'a> { [INFO] [stdout] | ------------------ method in this implementation [INFO] [stdout] 18 | fn recursive_remove_near( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/utils/cluster_tracker.rs:110:22 [INFO] [stdout] | [INFO] [stdout] 110 | pub fn get_stats(&self, id: usize) -> &ClusterStats { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^ [INFO] [stdout] | | || [INFO] [stdout] | | |the same lifetime is hidden here [INFO] [stdout] | | the same lifetime is elided here [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 110 | pub fn get_stats(&self, id: usize) -> &ClusterStats<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5m 52s [INFO] running `Command { std: "docker" "inspect" "9c2a83c4557f2b87d898718fc28cf63879b2c5786f4041a445c32f61ec1f2c32", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9c2a83c4557f2b87d898718fc28cf63879b2c5786f4041a445c32f61ec1f2c32", kill_on_drop: false }` [INFO] [stdout] 9c2a83c4557f2b87d898718fc28cf63879b2c5786f4041a445c32f61ec1f2c32