[INFO] cloning repository https://github.com/dgreen42/vcfilter [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/dgreen42/vcfilter" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdgreen42%2Fvcfilter", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdgreen42%2Fvcfilter'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 38f2602297d14bc9e0e2b7222da82f159d1d15b2 [INFO] checking dgreen42/vcfilter against try#d83b14207998f47b18a34e930157ac0d7c18b16e for pr-149137 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdgreen42%2Fvcfilter" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/dgreen42/vcfilter [INFO] finished tweaking git repo https://github.com/dgreen42/vcfilter [INFO] tweaked toml for git repo https://github.com/dgreen42/vcfilter written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/dgreen42/vcfilter on toolchain d83b14207998f47b18a34e930157ac0d7c18b16e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/dgreen42/vcfilter already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] checking dgreen42/vcfilter against try#d83b14207998f47b18a34e930157ac0d7c18b16e for pr-149137 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdgreen42%2Fvcfilter" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/dgreen42/vcfilter [INFO] finished tweaking git repo https://github.com/dgreen42/vcfilter [INFO] tweaked toml for git repo https://github.com/dgreen42/vcfilter written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/dgreen42/vcfilter on toolchain d83b14207998f47b18a34e930157ac0d7c18b16e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/dgreen42/vcfilter already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 93f3a50b7799fae879bb55b7b487abb51a43e8a5cab0c1f3aff0371e70d3fbe3 [INFO] running `Command { std: "docker" "start" "-a" "93f3a50b7799fae879bb55b7b487abb51a43e8a5cab0c1f3aff0371e70d3fbe3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "93f3a50b7799fae879bb55b7b487abb51a43e8a5cab0c1f3aff0371e70d3fbe3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "93f3a50b7799fae879bb55b7b487abb51a43e8a5cab0c1f3aff0371e70d3fbe3", kill_on_drop: false }` [INFO] [stdout] 93f3a50b7799fae879bb55b7b487abb51a43e8a5cab0c1f3aff0371e70d3fbe3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+d83b14207998f47b18a34e930157ac0d7c18b16e" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 42ead6e1529c2a3ce57045346b0a53510ee67eb5559b3fd4aa01d455a18a573c [INFO] running `Command { std: "docker" "start" "-a" "42ead6e1529c2a3ce57045346b0a53510ee67eb5559b3fd4aa01d455a18a573c", kill_on_drop: false }` [INFO] [stderr] Compiling serde v1.0.200 [INFO] [stderr] Checking memchr v2.7.2 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking vcfilter v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `Reader` and `Writer` [INFO] [stdout] --> src/main.rs:1:11 [INFO] [stdout] | [INFO] [stdout] 1 | use csv::{Reader, ReaderBuilder, Writer}; [INFO] [stdout] | ^^^^^^ ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/main.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `File` and `read_dir` [INFO] [stdout] --> src/main.rs:3:15 [INFO] [stdout] | [INFO] [stdout] 3 | use std::fs::{read_dir, File}; [INFO] [stdout] | ^^^^^^^^ ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/main.rs:4:15 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io::{BufRead, BufReader}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `PathBuf` and `Path` [INFO] [stdout] --> src/main.rs:5:17 [INFO] [stdout] | [INFO] [stdout] 5 | use std::path::{Path, PathBuf}; [INFO] [stdout] | ^^^^ ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Instant` [INFO] [stdout] --> src/main.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::time::Instant; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `usize` [INFO] [stdout] --> src/main.rs:7:16 [INFO] [stdout] | [INFO] [stdout] 7 | use std::{env, usize}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Reader` and `Writer` [INFO] [stdout] --> src/main.rs:1:11 [INFO] [stdout] | [INFO] [stdout] 1 | use csv::{Reader, ReaderBuilder, Writer}; [INFO] [stdout] | ^^^^^^ ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::HashMap` [INFO] [stdout] --> src/main.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use std::collections::HashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `File` and `read_dir` [INFO] [stdout] --> src/main.rs:3:15 [INFO] [stdout] | [INFO] [stdout] 3 | use std::fs::{read_dir, File}; [INFO] [stdout] | ^^^^^^^^ ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/main.rs:4:15 [INFO] [stdout] | [INFO] [stdout] 4 | use std::io::{BufRead, BufReader}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `PathBuf` and `Path` [INFO] [stdout] --> src/main.rs:5:17 [INFO] [stdout] | [INFO] [stdout] 5 | use std::path::{Path, PathBuf}; [INFO] [stdout] | ^^^^ ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Instant` [INFO] [stdout] --> src/main.rs:6:5 [INFO] [stdout] | [INFO] [stdout] 6 | use std::time::Instant; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `usize` [INFO] [stdout] --> src/main.rs:7:16 [INFO] [stdout] | [INFO] [stdout] 7 | use std::{env, usize}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `genotypes` [INFO] [stdout] --> src/main.rs:13:9 [INFO] [stdout] | [INFO] [stdout] 13 | let genotypes = env::args() [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_genotypes` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `genotypes` [INFO] [stdout] --> src/main.rs:13:9 [INFO] [stdout] | [INFO] [stdout] 13 | let genotypes = env::args() [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_genotypes` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2.42s [INFO] running `Command { std: "docker" "inspect" "42ead6e1529c2a3ce57045346b0a53510ee67eb5559b3fd4aa01d455a18a573c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "42ead6e1529c2a3ce57045346b0a53510ee67eb5559b3fd4aa01d455a18a573c", kill_on_drop: false }` [INFO] [stdout] 42ead6e1529c2a3ce57045346b0a53510ee67eb5559b3fd4aa01d455a18a573c