[INFO] cloning repository https://github.com/AndreaGuarracino/lib_bpaf
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/AndreaGuarracino/lib_bpaf" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1a8fbcc707d4b4203611b56a81f7fa25b4e069d1
[INFO] checking AndreaGuarracino/lib_bpaf against master#217cb73577ed6f30a2005dd75bab01d23ec4cd60 for pr-148939
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] finished tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] tweaked toml for git repo https://github.com/AndreaGuarracino/lib_bpaf written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/AndreaGuarracino/lib_bpaf on toolchain 217cb73577ed6f30a2005dd75bab01d23ec4cd60
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+217cb73577ed6f30a2005dd75bab01d23ec4cd60" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/AndreaGuarracino/lib_bpaf already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+217cb73577ed6f30a2005dd75bab01d23ec4cd60" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/lib_tracepoints`
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/lib_wfa2`
[INFO] [stderr]     Updating git submodule `https://github.com/smarco/WFA2-lib`
[INFO] [stderr]      Locking 7 packages to latest compatible versions
[INFO] [stderr]       Adding bytes v1.11.0
[INFO] [stderr]       Adding crossbeam-channel v0.5.15
[INFO] [stderr]       Adding crossbeam-utils v0.8.21
[INFO] [stderr]       Adding libz-rs-sys v0.5.2
[INFO] [stderr]       Adding noodles v0.100.0 (available: v0.102.0)
[INFO] [stderr]       Adding noodles-bgzf v0.42.0
[INFO] [stderr]       Adding zlib-rs v0.5.2
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded once_cell_polyfill v1.70.2
[INFO] [stderr]   Downloaded env_filter v0.1.4
[INFO] [stderr]   Downloaded libz-rs-sys v0.5.2
[INFO] [stderr]   Downloaded noodles v0.100.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.42.0
[INFO] [stderr]   Downloaded jiff-static v0.2.16
[INFO] [stderr]   Downloaded zlib-rs v0.5.2
[INFO] [stderr]   Downloaded jiff v0.2.16
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+217cb73577ed6f30a2005dd75bab01d23ec4cd60" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4153849b8911b96bf64afdbb684d81149ae14879d872b2d087dee6541f8dd2f3
[INFO] running `Command { std: "docker" "start" "-a" "4153849b8911b96bf64afdbb684d81149ae14879d872b2d087dee6541f8dd2f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4153849b8911b96bf64afdbb684d81149ae14879d872b2d087dee6541f8dd2f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4153849b8911b96bf64afdbb684d81149ae14879d872b2d087dee6541f8dd2f3", kill_on_drop: false }`
[INFO] [stdout] 4153849b8911b96bf64afdbb684d81149ae14879d872b2d087dee6541f8dd2f3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:94a0c148923f5b2b52a63ef0eeb1882ad339ab61bce784c8077cbe41c61feb6c" "/opt/rustwide/cargo-home/bin/cargo" "+217cb73577ed6f30a2005dd75bab01d23ec4cd60" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e061dcf439f8934b8c3325e962be4e4f17b2553cde1b750cb58f57b3e1a7ef0e
[INFO] running `Command { std: "docker" "start" "-a" "e061dcf439f8934b8c3325e962be4e4f17b2553cde1b750cb58f57b3e1a7ef0e", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]    Compiling find-msvc-tools v0.1.4
[INFO] [stderr]     Checking simd-adler32 v0.3.7
[INFO] [stderr]     Checking cfg-if v1.0.4
[INFO] [stderr]     Checking zlib-rs v0.5.2
[INFO] [stderr]     Checking regex-syntax v0.8.8
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ecfb9d8d)
[INFO] [stderr]     Checking crc32fast v1.5.0
[INFO] [stderr]     Checking anstyle v1.0.13
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]     Checking anstyle-query v1.1.4
[INFO] [stderr]     Checking log v0.4.28
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.2
[INFO] [stderr]     Checking jiff v0.2.16
[INFO] [stderr]     Checking anstream v0.6.21
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr] error: failed to run custom build command for `lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ecfb9d8d)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/lib_wfa2-3b99c5cd7cf8bf66/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (156) panicked at /opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/build.rs:177:9:
[INFO] [stderr]   Failed to build WFA2-lib: Make failed:
[INFO] [stderr]   STDOUT:
[INFO] [stderr]   rm -rf bin build lib 2> /dev/null
[INFO] [stderr]   make --directory=tools/align_benchmark clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   rm -rf ./build
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   make --directory=examples clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/examples'
[INFO] [stderr]   rm -rf bin
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ecfb9d8/WFA2-lib/examples'
[INFO] [stderr]   rm -rf tests/*.alg tests/*.log* 2> /dev/null
[INFO] [stderr] 
[INFO] [stderr]   STDERR:
[INFO] [stderr]   mkdir: cannot create directory 'bin': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'lib': Read-only file system
[INFO] [stderr]   make: *** [Makefile:70: setup] Error 1
[INFO] [stderr] 
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x63950d973f02 - std::backtrace_rs::backtrace::libunwind::trace::hf12beacd451e51d4
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x63950d973f02 - std::backtrace_rs::backtrace::trace_unsynchronized::hf6fead6a1bbc8430
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x63950d973f02 - std::sys::backtrace::_print_fmt::h9d014a34f7b74b8e
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/sys/backtrace.rs:66:9
[INFO] [stderr]      3:     0x63950d973f02 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h639f36bab51f3955
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/sys/backtrace.rs:39:26
[INFO] [stderr]      4:     0x63950d983167 - core::fmt::rt::Argument::fmt::he9e2dcd4d1a4f79f
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x63950d983167 - core::fmt::write::h791a50b587c63062
[INFO] [stderr]      6:     0x63950d949416 - std::io::default_write_fmt::h457b557e32e1fb00
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x63950d949416 - std::io::Write::write_fmt::hfe130653c54466c6
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/io/mod.rs:1994:13
[INFO] [stderr]      8:     0x63950d954561 - std::sys::backtrace::BacktraceLock::print::h3ee5721e3f554378
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/sys/backtrace.rs:42:9
[INFO] [stderr]      9:     0x63950d954561 - std::panicking::default_hook::{{closure}}::h78548964055f6042
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:293:27
[INFO] [stderr]     10:     0x63950d954386 - std::panicking::default_hook::h0a256f5fc8ef64e6
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:320:9
[INFO] [stderr]     11:     0x63950d954a6b - std::panicking::panic_with_hook::h066093fc9e0da349
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:826:13
[INFO] [stderr]     12:     0x63950d9548e8 - std::panicking::panic_handler::{{closure}}::hcad50f1998ef02e0
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:699:13
[INFO] [stderr]     13:     0x63950d952b69 - std::sys::backtrace::__rust_end_short_backtrace::h84a12e76b874911b
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/sys/backtrace.rs:174:18
[INFO] [stderr]     14:     0x63950d93e10d - __rustc[db2c63b0d9ad08bd]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:690:5
[INFO] [stderr]     15:     0x63950d9862bc - core::panicking::panic_fmt::h61ea4c5c8806d7fc
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x63950d939569 - build_script_build::main::h976485db388a64db
[INFO] [stderr]     17:     0x63950d93b7a3 - core::ops::function::FnOnce::call_once::h4cb9acec643101cc
[INFO] [stderr]     18:     0x63950d9338a6 - std::sys::backtrace::__rust_begin_short_backtrace::hfb512812508fb4f8
[INFO] [stderr]     19:     0x63950d93acb9 - std::rt::lang_start::{{closure}}::hb9542554ebad08d8
[INFO] [stderr]     20:     0x63950d94aa1a - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h474f7857509d3e2b
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     21:     0x63950d94aa1a - std::panicking::catch_unwind::do_call::h1b4842681d37b4de
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:582:40
[INFO] [stderr]     22:     0x63950d94aa1a - std::panicking::catch_unwind::h8caa954e23f3d392
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:545:19
[INFO] [stderr]     23:     0x63950d94aa1a - std::panic::catch_unwind::h799510bc1e15c53c
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panic.rs:359:14
[INFO] [stderr]     24:     0x63950d94aa1a - std::rt::lang_start_internal::{{closure}}::hdd766f796ed54cf9
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/rt.rs:175:24
[INFO] [stderr]     25:     0x63950d94aa1a - std::panicking::catch_unwind::do_call::hb51acc40ffa92e40
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:582:40
[INFO] [stderr]     26:     0x63950d94aa1a - std::panicking::catch_unwind::h4ba9c0843d285bb6
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panicking.rs:545:19
[INFO] [stderr]     27:     0x63950d94aa1a - std::panic::catch_unwind::hc6ee6b11e632194f
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/panic.rs:359:14
[INFO] [stderr]     28:     0x63950d94aa1a - std::rt::lang_start_internal::h035258992d18009b
[INFO] [stderr]                                  at /rustc/217cb73577ed6f30a2005dd75bab01d23ec4cd60/library/std/src/rt.rs:171:5
[INFO] [stderr]     29:     0x63950d93aca1 - std::rt::lang_start::hb1a40204df78dcab
[INFO] [stderr]     30:     0x63950d93dde5 - main
[INFO] [stderr]     31:     0x776d64e431ca - <unknown>
[INFO] [stderr]     32:     0x776d64e4328b - __libc_start_main
[INFO] [stderr]     33:     0x63950d933085 - _start
[INFO] [stderr]     34:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "e061dcf439f8934b8c3325e962be4e4f17b2553cde1b750cb58f57b3e1a7ef0e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e061dcf439f8934b8c3325e962be4e4f17b2553cde1b750cb58f57b3e1a7ef0e", kill_on_drop: false }`
[INFO] [stdout] e061dcf439f8934b8c3325e962be4e4f17b2553cde1b750cb58f57b3e1a7ef0e
