[INFO] fetching crate varlociraptor 8.8.2...
[INFO] checking varlociraptor-8.8.2 against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577
[INFO] extracting crate varlociraptor 8.8.2 into /workspace/builds/worker-2-tc1/source
[INFO] started tweaking crates.io crate varlociraptor 8.8.2
[INFO] finished tweaking crates.io crate varlociraptor 8.8.2
[INFO] tweaked toml for crates.io crate varlociraptor 8.8.2 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate varlociraptor 8.8.2 on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate varlociraptor 8.8.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded progress-logger v0.3.1
[INFO] [stderr]   Downloaded sysinfo v0.15.9
[INFO] [stderr]   Downloaded lru_time_cache v0.11.11
[INFO] [stderr]   Downloaded askama v0.11.1
[INFO] [stderr]   Downloaded askama_shared v0.12.2
[INFO] [stderr]   Downloaded askama_derive v0.11.2
[INFO] [stderr]   Downloaded boolean_expression v0.4.4
[INFO] [stderr]   Downloaded async_once v0.2.6
[INFO] [stderr]   Downloaded cached_proc_macro_types v0.1.1
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded auto_ops v0.3.0
[INFO] [stderr]   Downloaded GSL-sys v3.0.0
[INFO] [stderr]   Downloaded cached v0.42.0
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded counter v0.6.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded fern v0.6.2
[INFO] [stderr]   Downloaded cached_proc_macro v0.16.0
[INFO] [stderr]   Downloaded eval v0.4.3
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded rulinalg v0.3.7
[INFO] [stderr]   Downloaded bio v2.3.0
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded rusty-machine v0.5.4
[INFO] [stderr]   Downloaded GSL v6.0.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d9dab2280f284cc32903742e85c65b27e1ca99322e86fe3818ff54e943fc2704
[INFO] running `Command { std: "docker" "start" "-a" "d9dab2280f284cc32903742e85c65b27e1ca99322e86fe3818ff54e943fc2704", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d9dab2280f284cc32903742e85c65b27e1ca99322e86fe3818ff54e943fc2704", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d9dab2280f284cc32903742e85c65b27e1ca99322e86fe3818ff54e943fc2704", kill_on_drop: false }`
[INFO] [stdout] d9dab2280f284cc32903742e85c65b27e1ca99322e86fe3818ff54e943fc2704
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6f9e2cdcbf8cf1f72296f3145b0217121f1ece192e31d7f89b359db97f2606fe
[INFO] running `Command { std: "docker" "start" "-a" "6f9e2cdcbf8cf1f72296f3145b0217121f1ece192e31d7f89b359db97f2606fe", kill_on_drop: false }`
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling syn v2.0.110
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling openssl-src v300.5.4+3.5.4
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling openssl-sys v0.9.111
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling ahash v0.7.8
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling regex-automata v0.4.13
[INFO] [stderr]     Checking bytemuck v1.24.0
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]    Compiling curl-sys v0.4.84+curl-8.17.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling regex v1.12.2
[INFO] [stderr]    Compiling darling_core v0.14.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking wide v0.7.33
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]     Checking futures-core v0.3.31
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.1
[INFO] [stderr]    Compiling zerovec-derive v0.11.2
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling zerocopy-derive v0.8.27
[INFO] [stderr]    Compiling darling_macro v0.14.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking zerofrom v0.1.6
[INFO] [stderr]     Checking yoke v0.8.1
[INFO] [stderr]    Compiling darling v0.14.4
[INFO] [stderr]     Checking zerotrie v0.2.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]     Checking simba v0.9.1
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]     Checking zerovec v0.11.5
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking tinystr v0.8.2
[INFO] [stderr]     Checking zerocopy v0.8.27
[INFO] [stderr]     Checking icu_locale_core v2.1.1
[INFO] [stderr]     Checking potential_utf v0.1.4
[INFO] [stderr]     Checking icu_collections v2.1.1
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]     Checking serde v1.0.228
[INFO] [stderr]     Checking icu_provider v2.1.1
[INFO] [stderr]     Checking icu_normalizer v2.1.1
[INFO] [stderr]     Checking icu_properties v2.1.1
[INFO] [stderr]    Compiling toml v0.5.11
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking hashbrown v0.12.3
[INFO] [stderr]     Checking ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]     Checking idna_adapter v1.2.1
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking num-iter v0.1.45
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]    Compiling sysinfo v0.15.9
[INFO] [stderr]    Compiling jemalloc-sys v0.5.4+5.3.0-patched
[INFO] [stderr]    Compiling GSL-sys v3.0.0
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]     Checking futures-task v0.3.31
[INFO] [stderr]    Compiling humansize v1.1.1
[INFO] [stderr]    Compiling askama_escape v0.10.3
[INFO] [stderr]     Checking futures-util v0.3.31
[INFO] [stderr]    Compiling askama_shared v0.12.2
[INFO] [stderr]     Checking idna v1.1.0
[INFO] [stderr]     Checking hashbrown v0.15.5
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking num v0.1.43
[INFO] [stderr]     Checking nalgebra v0.33.2
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking thiserror v2.0.17
[INFO] [stderr]    Compiling derive_builder_core v0.12.0
[INFO] [stderr]     Checking futures-channel v0.3.31
[INFO] [stderr]    Compiling tokio-macros v2.6.0
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]     Checking lzma-sys v0.1.20
[INFO] [stderr]    Compiling ring v0.16.20
[INFO] [stderr]    Compiling proc-macro-error-attr2 v2.0.0
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking futures-io v0.3.31
[INFO] [stderr]    Compiling cached_proc_macro_types v0.1.1
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking yaml-rust v0.3.5
[INFO] [stderr]     Checking yaml-rust v0.4.5
[INFO] [stderr]    Compiling cached_proc_macro v0.16.0
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]    Compiling askama_derive v0.11.2
[INFO] [stderr]     Checking deranged v0.5.5
[INFO] [stderr]     Checking petgraph v0.8.3
[INFO] [stderr]     Checking futures v0.3.31
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]    Compiling proc-macro-error2 v2.0.1
[INFO] [stderr]     Checking rand v0.3.23
[INFO] [stderr]    Compiling derive_builder_macro v0.12.0
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]     Checking url v2.5.7
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking tokio v1.48.0
[INFO] [stderr]    Compiling pest_generator v2.8.3
[INFO] [stderr]    Compiling structopt-derive v0.4.18
[INFO] [stderr]     Checking rulinalg v0.3.7
[INFO] [stderr]     Checking indexmap v1.9.3
[INFO] [stderr]     Checking serde_json v1.0.145
[INFO] [stderr]     Checking getrandom v0.3.4
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]    Compiling async-trait v0.1.89
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling typed-builder-macro v0.20.1
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]     Checking itertools v0.9.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking instant v0.1.13
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking async_once v0.2.6
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]    Compiling shrinkwraprs v0.3.0
[INFO] [stderr]     Checking boolean_expression v0.4.4
[INFO] [stderr]     Checking eval v0.4.3
[INFO] [stderr]     Checking typed-builder v0.20.1
[INFO] [stderr]     Checking time v0.3.44
[INFO] [stderr]     Checking cached v0.42.0
[INFO] [stderr]     Checking tempfile v3.23.0
[INFO] [stderr]     Checking GSL v6.0.0
[INFO] [stderr]     Checking structopt v0.3.26
[INFO] [stderr]    Compiling pest_derive v2.8.3
[INFO] [stderr]     Checking rusty-machine v0.5.4
[INFO] [stderr]     Checking serde_yaml v0.8.26
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking progress-logger v0.3.1
[INFO] [stderr]     Checking bio v2.3.0
[INFO] [stderr]     Checking derive_builder v0.12.0
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]     Checking askama v0.11.1
[INFO] [stderr]     Checking fern v0.6.2
[INFO] [stderr]     Checking lru v0.7.8
[INFO] [stderr]     Checking half v2.7.1
[INFO] [stderr]     Checking bincode v1.3.3
[INFO] [stderr]     Checking ordered-float v1.1.1
[INFO] [stderr]     Checking uuid v0.8.2
[INFO] [stderr]     Checking counter v0.6.0
[INFO] [stderr]     Checking lru_time_cache v0.11.11
[INFO] [stderr]     Checking auto_ops v0.3.0
[INFO] [stderr]     Checking data-encoding v2.9.0
[INFO] [stderr]     Checking env_logger v0.9.3
[INFO] [stderr]     Checking jemallocator v0.5.4
[INFO] [stderr]     Checking rust-htslib v0.49.0
[INFO] [stderr]     Checking varlociraptor v8.8.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 9m 34s
[INFO] running `Command { std: "docker" "inspect" "6f9e2cdcbf8cf1f72296f3145b0217121f1ece192e31d7f89b359db97f2606fe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6f9e2cdcbf8cf1f72296f3145b0217121f1ece192e31d7f89b359db97f2606fe", kill_on_drop: false }`
[INFO] [stdout] 6f9e2cdcbf8cf1f72296f3145b0217121f1ece192e31d7f89b359db97f2606fe