[INFO] cloning repository https://github.com/natir/yacrd [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/natir/yacrd" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fyacrd", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fyacrd'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 36f69046e13d807d13ab9ccecec2b52dc770b485 [INFO] checking natir/yacrd against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fnatir%2Fyacrd" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/natir/yacrd [INFO] finished tweaking git repo https://github.com/natir/yacrd [INFO] tweaked toml for git repo https://github.com/natir/yacrd written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/natir/yacrd on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/natir/yacrd already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded noodles v0.84.0 [INFO] [stderr] Downloaded liblzma v0.3.5 [INFO] [stderr] Downloaded niffler v2.6.0 [INFO] [stderr] Downloaded noodles-fastq v0.16.0 [INFO] [stderr] Downloaded noodles-fasta v0.45.0 [INFO] [stderr] Downloaded noodles-bgzf v0.33.0 [INFO] [stderr] Downloaded liblzma-sys v0.3.9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] af358f4a300986d9901e7511e76bf67457f237ef2dab27e8188294ba774417c6 [INFO] running `Command { std: "docker" "start" "-a" "af358f4a300986d9901e7511e76bf67457f237ef2dab27e8188294ba774417c6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "af358f4a300986d9901e7511e76bf67457f237ef2dab27e8188294ba774417c6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "af358f4a300986d9901e7511e76bf67457f237ef2dab27e8188294ba774417c6", kill_on_drop: false }` [INFO] [stdout] af358f4a300986d9901e7511e76bf67457f237ef2dab27e8188294ba774417c6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e2779ad19c008fde4c5833463727696b8c7816020330390ae1f149101e78d229 [INFO] running `Command { std: "docker" "start" "-a" "e2779ad19c008fde4c5833463727696b8c7816020330390ae1f149101e78d229", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.162 [INFO] [stderr] Compiling proc-macro2 v1.0.89 [INFO] [stderr] Checking bstr v1.10.0 [INFO] [stderr] Compiling nix v0.29.0 [INFO] [stderr] Compiling thiserror v1.0.68 [INFO] [stderr] Compiling parking_lot_core v0.8.6 [INFO] [stderr] Checking flate2 v1.0.34 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Checking instant v0.1.13 [INFO] [stderr] Checking bytes v1.8.0 [INFO] [stderr] Checking regex-syntax v0.8.5 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Checking cvt v0.1.2 [INFO] [stderr] Checking os_str_bytes v6.6.1 [INFO] [stderr] Compiling anyhow v1.0.93 [INFO] [stderr] Compiling rustix v0.38.39 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Checking normpath v1.3.0 [INFO] [stderr] Checking textwrap v0.16.1 [INFO] [stderr] Checking clap_lex v0.2.4 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking noodles-fastq v0.16.0 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking noodles-bgzf v0.33.0 [INFO] [stderr] Checking regex-automata v0.4.8 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling syn v2.0.87 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking noodles-fasta v0.45.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling cc v1.1.36 [INFO] [stderr] Checking noodles v0.84.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking fs2 v0.4.3 [INFO] [stderr] Checking parking_lot v0.11.2 [INFO] [stderr] Checking sled v0.34.7 [INFO] [stderr] Compiling zstd-sys v2.0.13+zstd.1.5.6 [INFO] [stderr] Compiling liblzma-sys v0.3.9 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Checking tempfile v3.13.0 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking fs_at v0.2.1 [INFO] [stderr] Checking remove_dir_all v0.8.4 [INFO] [stderr] Checking env_logger v0.9.3 [INFO] [stderr] Compiling serde_derive v1.0.214 [INFO] [stderr] Compiling thiserror-impl v1.0.68 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling clap_derive v3.2.25 [INFO] [stderr] Checking liblzma v0.3.5 [INFO] [stderr] Checking bgzip v0.3.1 [INFO] [stderr] Checking clap v3.2.25 [INFO] [stderr] Compiling zstd-safe v7.2.1 [INFO] [stderr] Checking serde v1.0.214 [INFO] [stderr] Checking zstd v0.13.2 [INFO] [stderr] Checking niffler v2.6.0 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking yacrd v1.0.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `no_overlap` is never read [INFO] [stdout] --> src/reads2ovl/fullmemory.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 29 | pub struct FullMemory { [INFO] [stdout] | ---------- field in this struct [INFO] [stdout] 30 | reads2ovl: reads2ovl::MapReads2Ovl, [INFO] [stdout] 31 | no_overlap: Vec<(u32, u32)>, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `OnDiskRecord` is never constructed [INFO] [stdout] --> src/reads2ovl/ondisk.rs:41:8 [INFO] [stdout] | [INFO] [stdout] 41 | struct OnDiskRecord { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `OnDiskRecord` is never constructed [INFO] [stdout] --> src/reads2ovl/ondisk.rs:41:8 [INFO] [stdout] | [INFO] [stdout] 41 | struct OnDiskRecord { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 33.77s [INFO] running `Command { std: "docker" "inspect" "e2779ad19c008fde4c5833463727696b8c7816020330390ae1f149101e78d229", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e2779ad19c008fde4c5833463727696b8c7816020330390ae1f149101e78d229", kill_on_drop: false }` [INFO] [stdout] e2779ad19c008fde4c5833463727696b8c7816020330390ae1f149101e78d229