[INFO] cloning repository https://github.com/monarch-initiative/semsimian [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/monarch-initiative/semsimian" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmonarch-initiative%2Fsemsimian", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmonarch-initiative%2Fsemsimian'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 9dd28b880ce041874ccfb39dc589490ec9838b6e [INFO] checking monarch-initiative/semsimian against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmonarch-initiative%2Fsemsimian" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/monarch-initiative/semsimian [INFO] finished tweaking git repo https://github.com/monarch-initiative/semsimian [INFO] tweaked toml for git repo https://github.com/monarch-initiative/semsimian written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/monarch-initiative/semsimian on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/monarch-initiative/semsimian already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... 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"/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bf8e99fc875fbb0047919a01ec09d7b5c792bc77cc9c029419af17898babf49c [INFO] running `Command { std: "docker" "start" "-a" "bf8e99fc875fbb0047919a01ec09d7b5c792bc77cc9c029419af17898babf49c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bf8e99fc875fbb0047919a01ec09d7b5c792bc77cc9c029419af17898babf49c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bf8e99fc875fbb0047919a01ec09d7b5c792bc77cc9c029419af17898babf49c", kill_on_drop: false }` [INFO] [stdout] bf8e99fc875fbb0047919a01ec09d7b5c792bc77cc9c029419af17898babf49c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] abe3a924b66e526fa4df88731b2eee7cec8c5e64a58a502d9cbd86c996831fab [INFO] running `Command { std: "docker" "start" "-a" "abe3a924b66e526fa4df88731b2eee7cec8c5e64a58a502d9cbd86c996831fab", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Compiling autocfg v1.3.0 [INFO] [stderr] Compiling serde v1.0.204 [INFO] [stderr] Compiling target-lexicon v0.12.15 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Checking regex-syntax v0.8.4 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling serde_json v1.0.120 [INFO] [stderr] Compiling semver v1.0.23 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Checking anstyle-query v1.1.0 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Compiling camino v1.1.7 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Compiling anyhow v1.0.86 [INFO] [stderr] Checking bitflags v2.6.0 [INFO] [stderr] Compiling cc v1.1.1 [INFO] [stderr] Compiling portable-atomic v1.6.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Checking clap_lex v0.7.1 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling slab v0.4.9 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking linux-raw-sys v0.4.14 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking clap_builder v4.5.9 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling fs-err v2.11.0 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking parking_lot_core v0.9.10 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Compiling pyo3-build-config v0.20.3 [INFO] [stderr] Compiling indexmap v2.2.6 [INFO] [stderr] Compiling thiserror v1.0.62 [INFO] [stderr] Compiling toml_datetime v0.6.6 [INFO] [stderr] Checking winnow v0.6.13 [INFO] [stderr] Compiling rstest_macros v0.21.0 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Compiling syn v2.0.71 [INFO] [stderr] Checking shared_child v1.0.0 [INFO] [stderr] Checking filetime v0.2.23 [INFO] [stderr] Checking os_pipe v1.2.0 [INFO] [stderr] Checking is-terminal v0.4.12 [INFO] 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[stderr] Checking plotters v0.3.6 [INFO] [stderr] Checking ordered-float v4.2.1 [INFO] [stderr] Checking generator v0.8.1 [INFO] [stderr] Checking dict v0.1.5 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking oorandom v11.1.4 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] Compiling deepsize_derive v0.1.2 [INFO] [stderr] Checking deepsize v0.2.0 [INFO] [stderr] Checking bstr v1.9.1 [INFO] [stderr] Checking regex v1.10.5 [INFO] [stderr] Compiling proc-macro-crate v3.1.0 [INFO] [stderr] Checking lcov2cobertura v1.0.5 [INFO] [stderr] Checking opener v0.7.1 [INFO] [stderr] Checking opener v0.6.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.20.3 [INFO] [stderr] Compiling serde_derive v1.0.204 [INFO] [stderr] Compiling clap_derive v4.5.8 [INFO] [stderr] Compiling futures-macro v0.3.30 [INFO] [stderr] Compiling thiserror-impl v1.0.62 [INFO] [stderr] Checking futures-util v0.3.30 [INFO] [stderr] Checking clap v4.5.9 [INFO] [stderr] Checking clap_complete v4.5.8 [INFO] [stderr] Compiling pyo3-macros v0.20.3 [INFO] [stderr] Checking futures-executor v0.3.30 [INFO] [stderr] Checking futures v0.3.30 [INFO] [stderr] Checking rstest v0.21.0 [INFO] [stderr] Checking serde_spanned v0.6.6 [INFO] [stderr] Checking cargo-platform v0.1.8 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking toml_edit v0.22.15 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking cargo_metadata v0.18.1 [INFO] [stderr] Checking criterion v0.5.1 [INFO] [stderr] Checking flamegraph v0.6.5 [INFO] [stderr] Checking cargo-config2 v0.1.26 [INFO] [stderr] Checking rusqlite v0.31.0 [INFO] [stderr] Checking cargo-llvm-cov v0.6.10 [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1059:1 [INFO] [stdout] | [INFO] [stdout] 1059 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1060 | impl SearchType { [INFO] [stdout] | ---------- [INFO] [stdout] | | [INFO] [stdout] | `SearchType` is not local [INFO] [stdout] | `SearchType` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: `#[warn(non_local_definitions)]` on by default [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1086:1 [INFO] [stdout] | [INFO] [stdout] 1086 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1087 | impl Metric { [INFO] [stdout] | ------ [INFO] [stdout] | | [INFO] [stdout] | `Metric` is not local [INFO] [stdout] | `Metric` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1112:1 [INFO] [stdout] | [INFO] [stdout] 1112 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1113 | impl Semsimian { [INFO] [stdout] | --------- [INFO] [stdout] | | [INFO] [stdout] | `Semsimian` is not local [INFO] [stdout] | `Semsimian` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1059:1 [INFO] [stdout] | [INFO] [stdout] 1059 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1060 | impl SearchType { [INFO] [stdout] | ---------- [INFO] [stdout] | | [INFO] [stdout] | `SearchType` is not local [INFO] [stdout] | `SearchType` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: `#[warn(non_local_definitions)]` on by default [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1086:1 [INFO] [stdout] | [INFO] [stdout] 1086 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1087 | impl Metric { [INFO] [stdout] | ------ [INFO] [stdout] | | [INFO] [stdout] | `Metric` is not local [INFO] [stdout] | `Metric` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: non-local `impl` definition, `impl` blocks should be written at the same level as their item [INFO] [stdout] --> src/lib.rs:1112:1 [INFO] [stdout] | [INFO] [stdout] 1112 | #[pymethods] [INFO] [stdout] | -^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | `PyClassImplCollector` is not local [INFO] [stdout] | `PyClassNewTextSignature` is not local [INFO] [stdout] | move the `impl` block outside of this function `trampoline` and up 4 bodies [INFO] [stdout] 1113 | impl Semsimian { [INFO] [stdout] | --------- [INFO] [stdout] | | [INFO] [stdout] | `Semsimian` is not local [INFO] [stdout] | `Semsimian` is not local [INFO] [stdout] | [INFO] [stdout] = note: the attribute macro `pymethods` defines the non-local `impl`, and may need to be changed [INFO] [stdout] = note: the attribute macro `pymethods` may come from an old version of the `pyo3_macros` crate, try updating your dependency with `cargo update -p pyo3_macros` [INFO] [stdout] = note: an `impl` is never scoped, even when it is nested inside an item, as it may impact type checking outside of that item, which can be the case if neither the trait or the self type are at the same nesting level as the `impl` [INFO] [stdout] = note: this warning originates in the attribute macro `pymethods` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.70s [INFO] running `Command { std: "docker" "inspect" "abe3a924b66e526fa4df88731b2eee7cec8c5e64a58a502d9cbd86c996831fab", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "abe3a924b66e526fa4df88731b2eee7cec8c5e64a58a502d9cbd86c996831fab", kill_on_drop: false }` [INFO] [stdout] abe3a924b66e526fa4df88731b2eee7cec8c5e64a58a502d9cbd86c996831fab