[INFO] cloning repository https://github.com/NoguchiRyo/bampy [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/NoguchiRyo/bampy" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNoguchiRyo%2Fbampy", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNoguchiRyo%2Fbampy'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] adca7e4a139d4377c25882c6c6ccedeef2e4c9dc [INFO] checking NoguchiRyo/bampy against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FNoguchiRyo%2Fbampy" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/NoguchiRyo/bampy [INFO] finished tweaking git repo https://github.com/NoguchiRyo/bampy [INFO] tweaked toml for git repo https://github.com/NoguchiRyo/bampy written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/NoguchiRyo/bampy on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/NoguchiRyo/bampy already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3-build-config v0.24.2 [INFO] [stderr] Downloaded noodles v0.97.0 [INFO] [stderr] Downloaded pyo3-macros v0.24.2 [INFO] [stderr] Downloaded libz-rs-sys v0.5.0 [INFO] [stderr] Downloaded noodles-core v0.17.0 [INFO] [stderr] Downloaded noodles-csi v0.47.0 [INFO] [stderr] Downloaded pyo3-ffi v0.24.2 [INFO] [stderr] Downloaded numpy v0.24.0 [INFO] [stderr] Downloaded pyo3-macros-backend v0.24.2 [INFO] [stderr] Downloaded zlib-rs v0.5.0 [INFO] [stderr] Downloaded pyo3 v0.24.2 [INFO] [stderr] Downloaded noodles-bgzf v0.39.0 [INFO] [stderr] Downloaded noodles-sam v0.75.0 [INFO] [stderr] Downloaded noodles-bam v0.79.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ba71c0559cf4c88698d2d286af5e9f14c4b6d093bd07bb0079abc43fd2e76e50 [INFO] running `Command { std: "docker" "start" "-a" "ba71c0559cf4c88698d2d286af5e9f14c4b6d093bd07bb0079abc43fd2e76e50", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ba71c0559cf4c88698d2d286af5e9f14c4b6d093bd07bb0079abc43fd2e76e50", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ba71c0559cf4c88698d2d286af5e9f14c4b6d093bd07bb0079abc43fd2e76e50", kill_on_drop: false }` [INFO] [stdout] ba71c0559cf4c88698d2d286af5e9f14c4b6d093bd07bb0079abc43fd2e76e50 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6f411b51dde38d31554a68ef866364a5d27b9f17109b5c36c7228eb4e6c79eaf [INFO] running `Command { std: "docker" "start" "-a" "6f411b51dde38d31554a68ef866364a5d27b9f17109b5c36c7228eb4e6c79eaf", kill_on_drop: false }` [INFO] [stderr] Compiling target-lexicon v0.13.2 [INFO] [stderr] Compiling proc-macro2 v1.0.95 [INFO] [stderr] Checking zlib-rs v0.5.0 [INFO] [stderr] Checking lexical-util v1.0.6 [INFO] [stderr] Checking bstr v1.12.0 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling indoc v2.0.6 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking noodles-core v0.17.0 [INFO] [stderr] Checking lexical-write-integer v1.0.5 [INFO] [stderr] Checking lexical-parse-integer v1.0.5 [INFO] [stderr] Checking lexical-parse-float v1.0.5 [INFO] [stderr] Checking lexical-write-float v1.0.5 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking libz-rs-sys v0.5.0 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Checking lexical-core v1.0.5 [INFO] [stderr] Compiling pyo3-build-config v0.24.2 [INFO] [stderr] Checking flate2 v1.1.1 [INFO] [stderr] Checking noodles-bgzf v0.39.0 [INFO] [stderr] Checking noodles-csi v0.47.0 [INFO] [stderr] Checking noodles-sam v0.75.0 [INFO] [stderr] Compiling pyo3-macros-backend v0.24.2 [INFO] [stderr] Compiling pyo3-ffi v0.24.2 [INFO] [stderr] Compiling pyo3 v0.24.2 [INFO] [stderr] Compiling numpy v0.24.0 [INFO] [stderr] Checking noodles-bam v0.79.0 [INFO] [stderr] Checking noodles v0.97.0 [INFO] [stderr] Compiling pyo3-macros v0.24.2 [INFO] [stderr] Checking lazybam v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 18.68s [INFO] running `Command { std: "docker" "inspect" "6f411b51dde38d31554a68ef866364a5d27b9f17109b5c36c7228eb4e6c79eaf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6f411b51dde38d31554a68ef866364a5d27b9f17109b5c36c7228eb4e6c79eaf", kill_on_drop: false }` [INFO] [stdout] 6f411b51dde38d31554a68ef866364a5d27b9f17109b5c36c7228eb4e6c79eaf