[INFO] cloning repository https://github.com/CLIMB-COVID/maptide [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/CLIMB-COVID/maptide" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCLIMB-COVID%2Fmaptide", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCLIMB-COVID%2Fmaptide'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] b8ec5c7c1dfd34fd289e458d6a3f87bb4eeb7354 [INFO] checking CLIMB-COVID/maptide against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FCLIMB-COVID%2Fmaptide" "/workspace/builds/worker-4-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/CLIMB-COVID/maptide [INFO] finished tweaking git repo https://github.com/CLIMB-COVID/maptide [INFO] tweaked toml for git repo https://github.com/CLIMB-COVID/maptide written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/CLIMB-COVID/maptide on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/CLIMB-COVID/maptide already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles v0.31.1 [INFO] [stderr] Downloaded noodles-bam v0.25.1 [INFO] [stderr] Downloaded noodles-bgzf v0.18.0 [INFO] [stderr] Downloaded noodles-core v0.9.0 [INFO] [stderr] Downloaded noodles-fasta v0.17.0 [INFO] [stderr] Downloaded noodles-csi v0.12.0 [INFO] [stderr] Downloaded noodles-sam v0.22.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 071ecc34b162bfbe7eafd914f409ce3816ce97ed1c40cb0fc7ca30a508ff733f [INFO] running `Command { std: "docker" "start" "-a" "071ecc34b162bfbe7eafd914f409ce3816ce97ed1c40cb0fc7ca30a508ff733f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "071ecc34b162bfbe7eafd914f409ce3816ce97ed1c40cb0fc7ca30a508ff733f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "071ecc34b162bfbe7eafd914f409ce3816ce97ed1c40cb0fc7ca30a508ff733f", kill_on_drop: false }` [INFO] [stdout] 071ecc34b162bfbe7eafd914f409ce3816ce97ed1c40cb0fc7ca30a508ff733f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 09d4c77f5ca2af58120cf25dae2cb308cc75b64c1dc547f379511d8a95727ed2 [INFO] running `Command { std: "docker" "start" "-a" "09d4c77f5ca2af58120cf25dae2cb308cc75b64c1dc547f379511d8a95727ed2", kill_on_drop: false }` [INFO] [stderr] Compiling target-lexicon v0.13.2 [INFO] [stderr] Compiling once_cell v1.17.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.14 [INFO] [stderr] Checking lexical-util v0.8.5 [INFO] [stderr] Checking miniz_oxide v0.6.2 [INFO] [stderr] Compiling proc-macro2 v1.0.95 [INFO] [stderr] Checking bytes v1.3.0 [INFO] [stderr] Compiling unicode-ident v1.0.6 [INFO] [stderr] Compiling indexmap v1.9.2 [INFO] [stderr] Checking noodles-core v0.9.0 [INFO] [stderr] Compiling libc v0.2.139 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Checking lexical-parse-integer v0.8.6 [INFO] [stderr] Checking flate2 v1.0.25 [INFO] [stderr] Checking lexical-write-integer v0.8.5 [INFO] [stderr] Checking lexical-write-float v0.8.5 [INFO] [stderr] Checking lexical-parse-float v0.8.5 [INFO] [stderr] Checking crossbeam-channel v0.5.6 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling pyo3-build-config v0.24.2 [INFO] [stderr] Checking unindent v0.2.4 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Compiling indoc v2.0.6 [INFO] [stderr] Checking noodles-bgzf v0.18.0 [INFO] [stderr] Checking lexical-core v0.8.5 [INFO] [stderr] Checking noodles-csi v0.12.0 [INFO] [stderr] Checking noodles-fasta v0.17.0 [INFO] [stderr] Checking noodles-sam v0.22.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.24.2 [INFO] [stderr] Compiling pyo3-ffi v0.24.2 [INFO] [stderr] Compiling pyo3 v0.24.2 [INFO] [stderr] Checking noodles-bam v0.25.1 [INFO] [stderr] Checking noodles v0.31.1 [INFO] [stderr] Compiling pyo3-macros v0.24.2 [INFO] [stderr] Checking maptide v0.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 24.63s [INFO] running `Command { std: "docker" "inspect" "09d4c77f5ca2af58120cf25dae2cb308cc75b64c1dc547f379511d8a95727ed2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "09d4c77f5ca2af58120cf25dae2cb308cc75b64c1dc547f379511d8a95727ed2", kill_on_drop: false }` [INFO] [stdout] 09d4c77f5ca2af58120cf25dae2cb308cc75b64c1dc547f379511d8a95727ed2