[INFO] fetching crate rustybam 0.1.34...
[INFO] checking rustybam-0.1.34 against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577
[INFO] extracting crate rustybam 0.1.34 into /workspace/builds/worker-1-tc1/source
[INFO] removed /workspace/builds/worker-1-tc1/source/.cargo/config.toml
[INFO] started tweaking crates.io crate rustybam 0.1.34
[INFO] finished tweaking crates.io crate rustybam 0.1.34
[INFO] tweaked toml for crates.io crate rustybam 0.1.34 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate rustybam 0.1.34 on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate rustybam 0.1.34 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: file `/workspace/builds/worker-1-tc1/source/src/main.rs` found to be present in multiple build targets:
[INFO] [stderr]   * `bin` target `rb`
[INFO] [stderr]   * `bin` target `rustybam`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded calmio_filters v0.1.0
[INFO] [stderr]   Downloaded calm_io v0.1.1
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded libdeflater v0.12.0
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded bio-io v0.3.2
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded needletail v0.5.1
[INFO] [stderr]   Downloaded niffler v2.7.0
[INFO] [stderr]   Downloaded rust-htslib v0.44.1
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded gzp v0.11.3
[INFO] [stderr]   Downloaded curl-sys v0.4.80+curl-8.12.1
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded libdeflate-sys v0.12.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 452ddcf896846c48850b36c8b1ec5b69852e39600eed811b6c01a479e1c46118
[INFO] running `Command { std: "docker" "start" "-a" "452ddcf896846c48850b36c8b1ec5b69852e39600eed811b6c01a479e1c46118", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "452ddcf896846c48850b36c8b1ec5b69852e39600eed811b6c01a479e1c46118", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "452ddcf896846c48850b36c8b1ec5b69852e39600eed811b6c01a479e1c46118", kill_on_drop: false }`
[INFO] [stdout] 452ddcf896846c48850b36c8b1ec5b69852e39600eed811b6c01a479e1c46118
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e236bcc9996ae3bf35382d0d26d8373e3db4ba8561a91253b3d50c691a12ee28
[INFO] running `Command { std: "docker" "start" "-a" "e236bcc9996ae3bf35382d0d26d8373e3db4ba8561a91253b3d50c691a12ee28", kill_on_drop: false }`
[INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets:
[INFO] [stderr]   * `bin` target `rb`
[INFO] [stderr]   * `bin` target `rustybam`
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling zerocopy v0.8.24
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling libc v0.2.171
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling syn v2.0.100
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]     Checking smallvec v1.15.0
[INFO] [stderr]     Checking bytemuck v1.22.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling hashbrown v0.12.3
[INFO] [stderr]    Compiling os_str_bytes v6.6.1
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling textwrap v0.16.2
[INFO] [stderr]     Checking safe_arch v0.7.4
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling portable-atomic v1.11.0
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[INFO] [stderr]     Checking num_cpus v1.16.0
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[INFO] [stderr]     Checking futures-sink v0.3.31
[INFO] [stderr]    Compiling humantime v2.2.0
[INFO] [stderr]     Checking console v0.15.11
[INFO] [stderr]     Checking indexmap v2.9.0
[INFO] [stderr]     Checking core_affinity v0.8.3
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[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking num-format v0.4.4
[INFO] [stderr]     Checking num-complex v0.4.6
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[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling openssl-src v300.5.0+3.5.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.80+curl-8.12.1
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[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]    Compiling openssl-sys v0.9.107
[INFO] [stderr]    Compiling libz-sys v1.1.22
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[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]     Checking libdeflater v0.12.0
[INFO] [stderr]    Compiling clap_derive v3.2.25
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling calmio_filters v0.1.0
[INFO] [stderr]     Checking xz2 v0.1.7
[INFO] [stderr]     Checking calm_io v0.1.1
[INFO] [stderr]    Compiling clap v3.2.25
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]    Compiling synstructure v0.13.1
[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling icu_provider_macros v1.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling pin-project-internal v1.1.10
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.7.5
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]     Checking thiserror v2.0.12
[INFO] [stderr]     Checking pin-project v1.1.10
[INFO] [stderr]     Checking flume v0.10.14
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking zerofrom v0.1.6
[INFO] [stderr]     Checking yoke v0.7.5
[INFO] [stderr]     Checking zerovec v0.10.4
[INFO] [stderr]    Compiling clap_complete v3.2.5
[INFO] [stderr]     Checking serde v1.0.219
[INFO] [stderr]     Checking tinystr v0.7.6
[INFO] [stderr]     Checking icu_collections v1.5.0
[INFO] [stderr]    Compiling rustybam v0.1.34 (/opt/rustwide/workdir)
[INFO] [stderr]     Checking icu_locid v1.5.0
[INFO] [stderr]     Checking icu_provider v1.5.0
[INFO] [stderr]     Checking icu_locid_transform v1.5.0
[INFO] [stderr]     Checking icu_properties v1.5.1
[INFO] [stderr]     Checking flate2 v1.1.1
[INFO] [stderr]     Checking gzp v0.11.3
[INFO] [stderr]     Checking niffler v2.7.0
[INFO] [stderr]     Checking needletail v0.5.1
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]     Checking url v2.5.4
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking rust-htslib v0.44.1
[INFO] [stderr]     Checking bio-io v0.3.2
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]  --> src/annotate.rs:6:26
[INFO] [stdout]   |
[INFO] [stdout] 6 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<u64, bed::Record>>;
[INFO] [stdout]   |                          ^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]   |                          |
[INFO] [stdout]   |                          the lifetime is elided here
[INFO] [stdout]   |
[INFO] [stdout]   = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]   = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]   |
[INFO] [stdout] 6 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<'_, u64, bed::Record>>;
[INFO] [stdout]   |                                                                 +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/annotate.rs:10:26
[INFO] [stdout]    |
[INFO] [stdout] 10 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<u64, bed::Record>> {
[INFO] [stdout]    |                          ^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                          |
[INFO] [stdout]    |                          the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 10 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<'_, u64, bed::Record>> {
[INFO] [stdout]    |                                                                 +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:206:60
[INFO] [stdout]     |
[INFO] [stdout] 206 |                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout]     |                                                            ^               ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 206 -                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout] 206 +                     let largest_rec = group.max_by_key(|p| p.t_en - p.t_st ).unwrap();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:206:60
[INFO] [stdout]     |
[INFO] [stdout] 206 |                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout]     |                                                            ^               ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 206 -                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout] 206 +                     let largest_rec = group.max_by_key(|p| p.t_en - p.t_st ).unwrap();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:206:60
[INFO] [stdout]     |
[INFO] [stdout] 206 |                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout]     |                                                            ^               ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 206 -                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout] 206 +                     let largest_rec = group.max_by_key(|p| p.t_en - p.t_st ).unwrap();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]  --> src/annotate.rs:6:26
[INFO] [stdout]   |
[INFO] [stdout] 6 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<u64, bed::Record>>;
[INFO] [stdout]   |                          ^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]   |                          |
[INFO] [stdout]   |                          the lifetime is elided here
[INFO] [stdout]   |
[INFO] [stdout]   = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]   = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]   |
[INFO] [stdout] 6 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<'_, u64, bed::Record>>;
[INFO] [stdout]   |                                                                 +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/annotate.rs:10:26
[INFO] [stdout]    |
[INFO] [stdout] 10 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<u64, bed::Record>> {
[INFO] [stdout]    |                          ^^^^^                            ^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |                          |
[INFO] [stdout]    |                          the lifetime is elided here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 10 |     fn find_bed_overlaps(&self, rec: &bed::Record) -> Vec<Entry<'_, u64, bed::Record>> {
[INFO] [stdout]    |                                                                 +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:206:60
[INFO] [stdout]     |
[INFO] [stdout] 206 |                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout]     |                                                            ^               ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 206 -                     let largest_rec = group.max_by_key(|p| (p.t_en - p.t_st)).unwrap();
[INFO] [stdout] 206 +                     let largest_rec = group.max_by_key(|p| p.t_en - p.t_st ).unwrap();
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 16s
[INFO] running `Command { std: "docker" "inspect" "e236bcc9996ae3bf35382d0d26d8373e3db4ba8561a91253b3d50c691a12ee28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e236bcc9996ae3bf35382d0d26d8373e3db4ba8561a91253b3d50c691a12ee28", kill_on_drop: false }`
[INFO] [stdout] e236bcc9996ae3bf35382d0d26d8373e3db4ba8561a91253b3d50c691a12ee28
