[INFO] fetching crate perbase 1.1.0...
[INFO] checking perbase-1.1.0 against try#4f260f0f20b3133d20cfb50353c0221943af5796+rustflags=-Dunmustuse_in_always_ok for pr-148577
[INFO] extracting crate perbase 1.1.0 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate perbase 1.1.0
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate perbase 1.1.0
[INFO] tweaked toml for crates.io crate perbase 1.1.0 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate perbase 1.1.0 on toolchain 4f260f0f20b3133d20cfb50353c0221943af5796
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4f260f0f20b3133d20cfb50353c0221943af5796" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate perbase 1.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4f260f0f20b3133d20cfb50353c0221943af5796" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+4f260f0f20b3133d20cfb50353c0221943af5796" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4b6bc92b1ffe87f60f1f39fd87724c25a8c0ea016ac308036650f33af78a7b10
[INFO] running `Command { std: "docker" "start" "-a" "4b6bc92b1ffe87f60f1f39fd87724c25a8c0ea016ac308036650f33af78a7b10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4b6bc92b1ffe87f60f1f39fd87724c25a8c0ea016ac308036650f33af78a7b10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4b6bc92b1ffe87f60f1f39fd87724c25a8c0ea016ac308036650f33af78a7b10", kill_on_drop: false }`
[INFO] [stdout] 4b6bc92b1ffe87f60f1f39fd87724c25a8c0ea016ac308036650f33af78a7b10
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid -Dunmustuse_in_always_ok" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+4f260f0f20b3133d20cfb50353c0221943af5796" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] aa000d23b09d9f7713c93b77a3721aa32ec388f4ed84b1eb568ab7a95cbdb2d9
[INFO] running `Command { std: "docker" "start" "-a" "aa000d23b09d9f7713c93b77a3721aa32ec388f4ed84b1eb568ab7a95cbdb2d9", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.149
[INFO] [stderr]    Compiling proc-macro2 v1.0.69
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling serde v1.0.188
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[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]     Checking regex-syntax v0.8.0
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[INFO] [stderr]    Compiling semver v1.0.20
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[INFO] [stderr]    Compiling rustc_version v0.4.0
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[INFO] [stderr]     Checking itertools v0.10.5
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling syn v2.0.38
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking nanorand v0.7.0
[INFO] [stderr]     Checking core_affinity v0.5.10
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[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]     Checking num-complex v0.4.4
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling openssl-src v300.1.5+3.1.3
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking petgraph v0.6.4
[INFO] [stderr]     Checking itertools-num v0.1.3
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[INFO] [stderr]     Checking bytecount v0.6.4
[INFO] [stderr]     Checking rand v0.8.5
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[INFO] [stderr]     Checking rayon v1.8.0
[INFO] [stderr]    Compiling rstest v0.11.0
[INFO] [stderr]     Checking rust-lapper v1.1.0
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[INFO] [stderr]     Checking regex-automata v0.4.1
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[INFO] [stderr]     Checking rand_xorshift v0.3.0
[INFO] [stderr]     Checking regex-syntax v0.7.5
[INFO] [stderr]    Compiling libz-sys v1.1.12
[INFO] [stderr]    Compiling openssl-sys v0.9.93
[INFO] [stderr]    Compiling curl-sys v0.4.67+curl-8.3.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling libdeflate-sys v0.7.5
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling hts-sys v2.1.1
[INFO] [stderr]     Checking tempfile v3.8.0
[INFO] [stderr]     Checking rusty-fork v0.3.0
[INFO] [stderr]     Checking libdeflater v0.7.5
[INFO] [stderr]     Checking proptest v1.3.1
[INFO] [stderr]     Checking regex v1.10.0
[INFO] [stderr]     Checking bstr v1.7.0
[INFO] [stderr]     Checking env_logger v0.9.3
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking globset v0.4.13
[INFO] [stderr]    Compiling serde_derive v1.0.188
[INFO] [stderr]    Compiling thiserror-impl v1.0.49
[INFO] [stderr]    Compiling pin-project-internal v1.1.3
[INFO] [stderr]    Compiling strum_macros v0.25.2
[INFO] [stderr]    Compiling strum_macros v0.27.1
[INFO] [stderr]     Checking grep-cli v0.1.9
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling enum-map-derive v0.6.0
[INFO] [stderr]    Compiling getset v0.1.2
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]    Compiling structopt-derive v0.4.18
[INFO] [stderr]     Checking enum-map v1.1.1
[INFO] [stderr]     Checking nalgebra v0.27.1
[INFO] [stderr]     Checking pin-project v1.1.3
[INFO] [stderr]     Checking flume v0.10.14
[INFO] [stderr]     Checking bio-types v1.0.1
[INFO] [stderr]     Checking strum v0.27.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.8.3
[INFO] [stderr]     Checking csv v1.3.0
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]     Checking structopt v0.3.26
[INFO] [stderr]     Checking flate2 v1.0.27
[INFO] [stderr]     Checking gzp v0.10.1
[INFO] [stderr]     Checking statrs v0.15.0
[INFO] [stderr]     Checking bio v0.41.0
[INFO] [stderr]     Checking rust-htslib v0.39.5
[INFO] [stderr]     Checking perbase v1.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:23:5
[INFO] [stdout]    |
[INFO] [stdout] 23 | /     /// Input indexed BAM/CRAM to analyze.
[INFO] [stdout] 24 | |     reads: PathBuf,
[INFO] [stdout]    | |__________________^
[INFO] [stdout]    |
[INFO] [stdout]    = note: requested on the command line with `-D unmustuse-in-always-ok`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:26:5
[INFO] [stdout]    |
[INFO] [stdout] 26 | /     /// Indexed reference fasta, set if using CRAM.
[INFO] [stdout] 27 | |     #[structopt(long, short = "r")]
[INFO] [stdout] 28 | |     ref_fasta: Option<PathBuf>,
[INFO] [stdout]    | |______________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:30:5
[INFO] [stdout]    |
[INFO] [stdout] 30 | /     /// A BED file containing regions of interest. If specified, only bases from the given regions will be reported on.
[INFO] [stdout] 31 | |     #[structopt(long, short = "b")]
[INFO] [stdout] 32 | |     bed_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:34:5
[INFO] [stdout]    |
[INFO] [stdout] 34 | /     /// A BCF/VCF file containing positions of interest. If specified, only bases from the given positions will be reported on.
[INFO] [stdout] 35 | |     #[structopt(long, short = "B")]
[INFO] [stdout] 36 | |     bcf_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:38:5
[INFO] [stdout]    |
[INFO] [stdout] 38 | /     /// Output path, defaults to stdout.
[INFO] [stdout] 39 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 40 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/merge_adjacent.rs:17:5
[INFO] [stdout]    |
[INFO] [stdout] 17 | /     /// Input bed-like file, defaults to STDIN.
[INFO] [stdout] 18 | |     in_file: Option<PathBuf>,
[INFO] [stdout]    | |____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/merge_adjacent.rs:36:5
[INFO] [stdout]    |
[INFO] [stdout] 36 | /     /// The output location, defaults to STDOUT
[INFO] [stdout] 37 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 38 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:28:5
[INFO] [stdout]    |
[INFO] [stdout] 28 | /     /// Input indexed BAM/CRAM to analyze.
[INFO] [stdout] 29 | |     reads: PathBuf,
[INFO] [stdout]    | |__________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:31:5
[INFO] [stdout]    |
[INFO] [stdout] 31 | /     /// Indexed reference fasta, set if using CRAM.
[INFO] [stdout] 32 | |     #[structopt(long, short = "r")]
[INFO] [stdout] 33 | |     ref_fasta: Option<PathBuf>,
[INFO] [stdout]    | |______________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:35:5
[INFO] [stdout]    |
[INFO] [stdout] 35 | /     /// A BED file containing regions of interest. If specified, only bases from the given regions will be reported on.
[INFO] [stdout] 36 | |     #[structopt(long, short = "b")]
[INFO] [stdout] 37 | |     bed_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:39:5
[INFO] [stdout]    |
[INFO] [stdout] 39 | /     /// A BCF/VCF file containing positions of interest. If specified, only bases from the given positions will be reported on.
[INFO] [stdout] 40 | |     /// Note that it may be more efficient to calculate depth over regions if your positions are clustered tightly together.
[INFO] [stdout] 41 | |     #[structopt(long, short = "B")]
[INFO] [stdout] 42 | |     bcf_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:44:5
[INFO] [stdout]    |
[INFO] [stdout] 44 | /     /// Output path, defaults to stdout.
[INFO] [stdout] 45 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 46 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `perbase` (bin "perbase") due to 12 previous errors
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:23:5
[INFO] [stdout]    |
[INFO] [stdout] 23 | /     /// Input indexed BAM/CRAM to analyze.
[INFO] [stdout] 24 | |     reads: PathBuf,
[INFO] [stdout]    | |__________________^
[INFO] [stdout]    |
[INFO] [stdout]    = note: requested on the command line with `-D unmustuse-in-always-ok`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:26:5
[INFO] [stdout]    |
[INFO] [stdout] 26 | /     /// Indexed reference fasta, set if using CRAM.
[INFO] [stdout] 27 | |     #[structopt(long, short = "r")]
[INFO] [stdout] 28 | |     ref_fasta: Option<PathBuf>,
[INFO] [stdout]    | |______________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:30:5
[INFO] [stdout]    |
[INFO] [stdout] 30 | /     /// A BED file containing regions of interest. If specified, only bases from the given regions will be reported on.
[INFO] [stdout] 31 | |     #[structopt(long, short = "b")]
[INFO] [stdout] 32 | |     bed_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:34:5
[INFO] [stdout]    |
[INFO] [stdout] 34 | /     /// A BCF/VCF file containing positions of interest. If specified, only bases from the given positions will be reported on.
[INFO] [stdout] 35 | |     #[structopt(long, short = "B")]
[INFO] [stdout] 36 | |     bcf_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/base_depth.rs:38:5
[INFO] [stdout]    |
[INFO] [stdout] 38 | /     /// Output path, defaults to stdout.
[INFO] [stdout] 39 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 40 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/merge_adjacent.rs:17:5
[INFO] [stdout]    |
[INFO] [stdout] 17 | /     /// Input bed-like file, defaults to STDIN.
[INFO] [stdout] 18 | |     in_file: Option<PathBuf>,
[INFO] [stdout]    | |____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/merge_adjacent.rs:36:5
[INFO] [stdout]    |
[INFO] [stdout] 36 | /     /// The output location, defaults to STDOUT
[INFO] [stdout] 37 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 38 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:28:5
[INFO] [stdout]    |
[INFO] [stdout] 28 | /     /// Input indexed BAM/CRAM to analyze.
[INFO] [stdout] 29 | |     reads: PathBuf,
[INFO] [stdout]    | |__________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:31:5
[INFO] [stdout]    |
[INFO] [stdout] 31 | /     /// Indexed reference fasta, set if using CRAM.
[INFO] [stdout] 32 | |     #[structopt(long, short = "r")]
[INFO] [stdout] 33 | |     ref_fasta: Option<PathBuf>,
[INFO] [stdout]    | |______________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:35:5
[INFO] [stdout]    |
[INFO] [stdout] 35 | /     /// A BED file containing regions of interest. If specified, only bases from the given regions will be reported on.
[INFO] [stdout] 36 | |     #[structopt(long, short = "b")]
[INFO] [stdout] 37 | |     bed_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:39:5
[INFO] [stdout]    |
[INFO] [stdout] 39 | /     /// A BCF/VCF file containing positions of interest. If specified, only bases from the given positions will be reported on.
[INFO] [stdout] 40 | |     /// Note that it may be more efficient to calculate depth over regions if your positions are clustered tightly together.
[INFO] [stdout] 41 | |     #[structopt(long, short = "B")]
[INFO] [stdout] 42 | |     bcf_file: Option<PathBuf>,
[INFO] [stdout]    | |_____________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: this type will no longer be must used: Result<PathBuf, Infallible>
[INFO] [stdout]   --> src/commands/only_depth.rs:44:5
[INFO] [stdout]    |
[INFO] [stdout] 44 | /     /// Output path, defaults to stdout.
[INFO] [stdout] 45 | |     #[structopt(long, short = "o")]
[INFO] [stdout] 46 | |     output: Option<PathBuf>,
[INFO] [stdout]    | |___________________________^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `perbase` (bin "perbase" test) due to 12 previous errors
[INFO] running `Command { std: "docker" "inspect" "aa000d23b09d9f7713c93b77a3721aa32ec388f4ed84b1eb568ab7a95cbdb2d9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aa000d23b09d9f7713c93b77a3721aa32ec388f4ed84b1eb568ab7a95cbdb2d9", kill_on_drop: false }`
[INFO] [stdout] aa000d23b09d9f7713c93b77a3721aa32ec388f4ed84b1eb568ab7a95cbdb2d9
