[INFO] fetching crate optrs 0.1.0...
[INFO] checking optrs-0.1.0 against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577
[INFO] extracting crate optrs 0.1.0 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate optrs 0.1.0
[INFO] finished tweaking crates.io crate optrs 0.1.0
[INFO] tweaked toml for crates.io crate optrs 0.1.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate optrs 0.1.0 on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate optrs 0.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] [stdout] warning: unused import: `BondOrder`
[INFO] [stdout]  --> src/molecule.rs:7:40
[INFO] [stdout]   |
[INFO] [stdout] 7 | use crate::connectivity::bonds::{Bond, BondOrder};
[INFO] [stdout]   |                                        ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::ff::forcefield::Forcefield`
[INFO] [stdout]  --> src/utils.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use crate::ff::forcefield::Forcefield;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::molecule::Molecule`
[INFO] [stdout]  --> src/utils.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use crate::molecule::Molecule;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `main` is never used
[INFO] [stdout]   --> src/lib.rs:26:4
[INFO] [stdout]    |
[INFO] [stdout] 26 | fn main() { run(CommandLineArguments::parse()) }
[INFO] [stdout]    |    ^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `energy`, `gradient`, `numerical_gradient`, and `has_dihedrals` are never used
[INFO] [stdout]    --> src/molecule.rs:84:12
[INFO] [stdout]     |
[INFO] [stdout]  28 | impl Molecule{
[INFO] [stdout]     | ------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout]  84 |     pub fn energy(&self, forcefield: &mut dyn Forcefield) -> f64{
[INFO] [stdout]     |            ^^^^^^
[INFO] [stdout] ...
[INFO] [stdout]  89 |     pub fn gradient(&mut self,
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout]  95 |     pub fn numerical_gradient(&mut self,
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 224 |     fn has_dihedrals(&self) -> bool{
[INFO] [stdout]     |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `is_metal` is never used
[INFO] [stdout]   --> src/atoms.rs:96:12
[INFO] [stdout]    |
[INFO] [stdout] 17 | impl Atom {
[INFO] [stdout]    | --------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 96 |     pub fn is_metal(&self) -> bool{
[INFO] [stdout]    |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated items `from_integer` and `is_main_group` are never used
[INFO] [stdout]    --> src/atoms.rs:217:12
[INFO] [stdout]     |
[INFO] [stdout] 209 | impl AtomicNumber {
[INFO] [stdout]     | ----------------- associated items in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 217 |     pub fn from_integer(value: usize) -> Result<Self, &'static str>{
[INFO] [stdout]     |            ^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 327 |     pub fn is_main_group(&self) -> bool{
[INFO] [stdout]     |            ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: static `METALLIC_ELEMENTS` is never used
[INFO] [stdout]    --> src/atoms.rs:353:8
[INFO] [stdout]     |
[INFO] [stdout] 353 | static METALLIC_ELEMENTS: [&'static str; 92] = [
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `involves_idxs` and `force_constant` are never used
[INFO] [stdout]   --> src/ff/forcefield.rs:16:8
[INFO] [stdout]    |
[INFO] [stdout] 14 | pub trait EnergyFunction{
[INFO] [stdout]    |           -------------- methods in this trait
[INFO] [stdout] 15 |
[INFO] [stdout] 16 |     fn involves_idxs(&self, idxs: Vec<usize>) -> bool;
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout] 17 |
[INFO] [stdout] 18 |     fn force_constant(&self) -> f64;
[INFO] [stdout]    |        ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `involves_idxs` is never used
[INFO] [stdout]    --> src/ff/angles.rs:174:4
[INFO] [stdout]     |
[INFO] [stdout] 174 | fn involves_idxs(angle: &dyn HarmonicAngle, idxs: Vec<usize>) -> bool {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `i_j_are_in` is never used
[INFO] [stdout]    --> src/ff/nonbonded.rs:106:4
[INFO] [stdout]     |
[INFO] [stdout] 106 | fn i_j_are_in(i: usize, j: usize, idxs: Vec<usize>) -> bool {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `filename` is never read
[INFO] [stdout]   --> src/io/xyz.rs:14:9
[INFO] [stdout]    |
[INFO] [stdout] 12 | pub struct XYZFile{
[INFO] [stdout]    |            ------- field in this struct
[INFO] [stdout] 13 |
[INFO] [stdout] 14 |     pub filename:       String,
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `run` is never used
[INFO] [stdout]   --> src/cli.rs:20:8
[INFO] [stdout]    |
[INFO] [stdout] 20 | pub fn run(args: CommandLineArguments) {
[INFO] [stdout]    |        ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `BondOrder`
[INFO] [stdout]  --> src/molecule.rs:7:40
[INFO] [stdout]   |
[INFO] [stdout] 7 | use crate::connectivity::bonds::{Bond, BondOrder};
[INFO] [stdout]   |                                        ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::ff::forcefield::Forcefield`
[INFO] [stdout]  --> src/utils.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use crate::ff::forcefield::Forcefield;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::molecule::Molecule`
[INFO] [stdout]  --> src/utils.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use crate::molecule::Molecule;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `filename` is never read
[INFO] [stdout]   --> src/io/xyz.rs:14:9
[INFO] [stdout]    |
[INFO] [stdout] 12 | pub struct XYZFile{
[INFO] [stdout]    |            ------- field in this struct
[INFO] [stdout] 13 |
[INFO] [stdout] 14 |     pub filename:       String,
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: multiple associated items are never used
[INFO] [stdout]    --> src/molecule.rs:52:12
[INFO] [stdout]     |
[INFO] [stdout]  28 | impl Molecule{
[INFO] [stdout]     | ------------- associated items in this implementation
[INFO] [stdout] ...
[INFO] [stdout]  52 |     pub fn from_atomic_symbols(symbols: &[&str]) -> Self{
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout]  84 |     pub fn energy(&self, forcefield: &mut dyn Forcefield) -> f64{
[INFO] [stdout]     |            ^^^^^^
[INFO] [stdout] ...
[INFO] [stdout]  89 |     pub fn gradient(&mut self,
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout]  95 |     pub fn numerical_gradient(&mut self,
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 224 |     fn has_dihedrals(&self) -> bool{
[INFO] [stdout]     |        ^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 416 |     fn minimum_pairwise_distance(&self) -> f64{
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 435 |     pub fn randomise_coordinates(&mut self){
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 468 |     pub fn build_3d(&mut self){
[INFO] [stdout]     |            ^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `clear` is never used
[INFO] [stdout]    --> src/molecule.rs:554:12
[INFO] [stdout]     |
[INFO] [stdout] 551 | impl Connectivity {
[INFO] [stdout]     | ----------------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 554 |     pub fn clear(&mut self){
[INFO] [stdout]     |            ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `is_metal` is never used
[INFO] [stdout]   --> src/atoms.rs:96:12
[INFO] [stdout]    |
[INFO] [stdout] 17 | impl Atom {
[INFO] [stdout]    | --------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 96 |     pub fn is_metal(&self) -> bool{
[INFO] [stdout]    |            ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated items `from_integer` and `is_main_group` are never used
[INFO] [stdout]    --> src/atoms.rs:217:12
[INFO] [stdout]     |
[INFO] [stdout] 209 | impl AtomicNumber {
[INFO] [stdout]     | ----------------- associated items in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 217 |     pub fn from_integer(value: usize) -> Result<Self, &'static str>{
[INFO] [stdout]     |            ^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 327 |     pub fn is_main_group(&self) -> bool{
[INFO] [stdout]     |            ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: static `METALLIC_ELEMENTS` is never used
[INFO] [stdout]    --> src/atoms.rs:353:8
[INFO] [stdout]     |
[INFO] [stdout] 353 | static METALLIC_ELEMENTS: [&'static str; 92] = [
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variant `Quadruple` is never constructed
[INFO] [stdout]   --> src/connectivity/bonds.rs:99:5
[INFO] [stdout]    |
[INFO] [stdout] 94 | pub enum BondOrder{
[INFO] [stdout]    |          --------- variant in this enum
[INFO] [stdout] ...
[INFO] [stdout] 99 |     Quadruple
[INFO] [stdout]    |     ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `BondOrder` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated functions `iterator` and `from_value` are never used
[INFO] [stdout]    --> src/connectivity/bonds.rs:111:8
[INFO] [stdout]     |
[INFO] [stdout] 109 | impl BondOrder {
[INFO] [stdout]     | -------------- associated functions in this implementation
[INFO] [stdout] 110 |
[INFO] [stdout] 111 |     fn iterator() ->  Iter<'static, BondOrder>{
[INFO] [stdout]     |        ^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 128 |     pub(crate) fn from_value(value: &f64) -> Self{
[INFO] [stdout]     |                   ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `involves_idxs` and `force_constant` are never used
[INFO] [stdout]   --> src/ff/forcefield.rs:16:8
[INFO] [stdout]    |
[INFO] [stdout] 14 | pub trait EnergyFunction{
[INFO] [stdout]    |           -------------- methods in this trait
[INFO] [stdout] 15 |
[INFO] [stdout] 16 |     fn involves_idxs(&self, idxs: Vec<usize>) -> bool;
[INFO] [stdout]    |        ^^^^^^^^^^^^^
[INFO] [stdout] 17 |
[INFO] [stdout] 18 |     fn force_constant(&self) -> f64;
[INFO] [stdout]    |        ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `involves_idxs` is never used
[INFO] [stdout]    --> src/ff/angles.rs:174:4
[INFO] [stdout]     |
[INFO] [stdout] 174 | fn involves_idxs(angle: &dyn HarmonicAngle, idxs: Vec<usize>) -> bool {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `i_j_are_in` is never used
[INFO] [stdout]    --> src/ff/nonbonded.rs:106:4
[INFO] [stdout]     |
[INFO] [stdout] 106 | fn i_j_are_in(i: usize, j: usize, idxs: Vec<usize>) -> bool {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `filename` is never read
[INFO] [stdout]   --> src/io/xyz.rs:14:9
[INFO] [stdout]    |
[INFO] [stdout] 12 | pub struct XYZFile{
[INFO] [stdout]    |            ------- field in this struct
[INFO] [stdout] 13 |
[INFO] [stdout] 14 |     pub filename:       String,
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `from_max_iterations` is never used
[INFO] [stdout]   --> src/opt/sd.rs:33:12
[INFO] [stdout]    |
[INFO] [stdout] 18 | impl SteepestDecentOptimiser {
[INFO] [stdout]    | ---------------------------- associated function in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 33 |     pub fn from_max_iterations(max_num_iterations: usize) -> Self{
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: trait `IsVeryClose` is never used
[INFO] [stdout]   --> src/utils.rs:21:11
[INFO] [stdout]    |
[INFO] [stdout] 21 | pub trait IsVeryClose{
[INFO] [stdout]    |           ^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `filename` is never read
[INFO] [stdout]   --> src/io/xyz.rs:14:9
[INFO] [stdout]    |
[INFO] [stdout] 12 | pub struct XYZFile{
[INFO] [stdout]    |            ------- field in this struct
[INFO] [stdout] 13 |
[INFO] [stdout] 14 |     pub filename:       String,
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 17.91s
[INFO] running `Command { std: "docker" "inspect" "4f59d9bc87bdffbd36bd67b831207308373a7901d86c55681ee68c8cb4179b3e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4f59d9bc87bdffbd36bd67b831207308373a7901d86c55681ee68c8cb4179b3e", kill_on_drop: false }`
[INFO] [stdout] 4f59d9bc87bdffbd36bd67b831207308373a7901d86c55681ee68c8cb4179b3e
