[INFO] cloning repository https://github.com/patbohn/bamStats
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/patbohn/bamStats" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpatbohn%2FbamStats", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpatbohn%2FbamStats'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] a2a12c269e38bb6a0af7a868afbf5fdac5b6241d
[INFO] checking patbohn/bamStats against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpatbohn%2FbamStats" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/patbohn/bamStats
[INFO] finished tweaking git repo https://github.com/patbohn/bamStats
[INFO] tweaked toml for git repo https://github.com/patbohn/bamStats written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/patbohn/bamStats on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/patbohn/bamStats already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bam v0.1.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 60b620312ab1cf149256e75e434b015c69d688832f2d7066fbe879c92c959d9d
[INFO] running `Command { std: "docker" "start" "-a" "60b620312ab1cf149256e75e434b015c69d688832f2d7066fbe879c92c959d9d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "60b620312ab1cf149256e75e434b015c69d688832f2d7066fbe879c92c959d9d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "60b620312ab1cf149256e75e434b015c69d688832f2d7066fbe879c92c959d9d", kill_on_drop: false }`
[INFO] [stdout] 60b620312ab1cf149256e75e434b015c69d688832f2d7066fbe879c92c959d9d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 27f511a24f4eb99a19a6213d85ee80b8506dbdef8929b106c6298cba84a5df0e
[INFO] running `Command { std: "docker" "start" "-a" "27f511a24f4eb99a19a6213d85ee80b8506dbdef8929b106c6298cba84a5df0e", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling libc v0.2.168
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking unicode-width v0.1.14
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking flate2 v1.0.35
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]     Checking bam v0.1.4
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]    Compiling structopt-derive v0.4.18
[INFO] [stderr]     Checking structopt v0.3.26
[INFO] [stderr]     Checking bamStats v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `create_dir_all`
[INFO] [stdout]  --> src/main.rs:1:15
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::fs::{create_dir_all, File};
[INFO] [stdout]   |               ^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `create_dir_all`
[INFO] [stdout]  --> src/main.rs:1:15
[INFO] [stdout]   |
[INFO] [stdout] 1 | use std::fs::{create_dir_all, File};
[INFO] [stdout]   |               ^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `sequence`
[INFO] [stdout]   --> src/main.rs:89:13
[INFO] [stdout]    |
[INFO] [stdout] 89 |         let sequence = String::from_utf8_lossy(&raw_seq);
[INFO] [stdout]    |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sequence`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `run_id`
[INFO] [stdout]   --> src/main.rs:93:13
[INFO] [stdout]    |
[INFO] [stdout] 93 |         let run_id = raw_run_id.split("_").next().unwrap_or("NA");
[INFO] [stdout]    |             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_run_id`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `phred_to_utf8` is never used
[INFO] [stdout]    --> src/main.rs:233:4
[INFO] [stdout]     |
[INFO] [stdout] 233 | fn phred_to_utf8(quality_array: &[u8]) -> String {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `moves_to_utf8` is never used
[INFO] [stdout]    --> src/main.rs:249:4
[INFO] [stdout]     |
[INFO] [stdout] 249 | fn moves_to_utf8(moves: &[usize]) -> (String, Vec<usize>) {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `sequence`
[INFO] [stdout]   --> src/main.rs:89:13
[INFO] [stdout]    |
[INFO] [stdout] 89 |         let sequence = String::from_utf8_lossy(&raw_seq);
[INFO] [stdout]    |             ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sequence`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `run_id`
[INFO] [stdout]   --> src/main.rs:93:13
[INFO] [stdout]    |
[INFO] [stdout] 93 |         let run_id = raw_run_id.split("_").next().unwrap_or("NA");
[INFO] [stdout]    |             ^^^^^^ help: if this is intentional, prefix it with an underscore: `_run_id`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `phred_to_utf8` is never used
[INFO] [stdout]    --> src/main.rs:233:4
[INFO] [stdout]     |
[INFO] [stdout] 233 | fn phred_to_utf8(quality_array: &[u8]) -> String {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `moves_to_utf8` is never used
[INFO] [stdout]    --> src/main.rs:249:4
[INFO] [stdout]     |
[INFO] [stdout] 249 | fn moves_to_utf8(moves: &[usize]) -> (String, Vec<usize>) {
[INFO] [stdout]     |    ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 6.47s
[INFO] running `Command { std: "docker" "inspect" "27f511a24f4eb99a19a6213d85ee80b8506dbdef8929b106c6298cba84a5df0e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "27f511a24f4eb99a19a6213d85ee80b8506dbdef8929b106c6298cba84a5df0e", kill_on_drop: false }`
[INFO] [stdout] 27f511a24f4eb99a19a6213d85ee80b8506dbdef8929b106c6298cba84a5df0e
