[INFO] cloning repository https://github.com/YourePrettyGood/dedup_merged_BAMs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/YourePrettyGood/dedup_merged_BAMs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYourePrettyGood%2Fdedup_merged_BAMs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYourePrettyGood%2Fdedup_merged_BAMs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] f77ede4f995cbdafa44070a441a2ede0e39bbd91
[INFO] checking YourePrettyGood/dedup_merged_BAMs against master#642c19bfc3a5c1de985bf5d0cc8207ac9d22708a for pr-148577
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FYourePrettyGood%2Fdedup_merged_BAMs" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/YourePrettyGood/dedup_merged_BAMs
[INFO] finished tweaking git repo https://github.com/YourePrettyGood/dedup_merged_BAMs
[INFO] tweaked toml for git repo https://github.com/YourePrettyGood/dedup_merged_BAMs written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/YourePrettyGood/dedup_merged_BAMs on toolchain 642c19bfc3a5c1de985bf5d0cc8207ac9d22708a
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/YourePrettyGood/dedup_merged_BAMs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded proc-macro2 v1.0.38
[INFO] [stderr]   Downloaded openssl-sys v0.9.73
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded clap_lex v0.2.0
[INFO] [stderr]   Downloaded strum_macros v0.23.1
[INFO] [stderr]   Downloaded clap_derive v3.1.7
[INFO] [stderr]   Downloaded bio-types v0.12.1
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded rust-htslib v0.38.2
[INFO] [stderr]   Downloaded clap v3.1.17
[INFO] [stderr]   Downloaded lzma-sys v0.1.17
[INFO] [stderr]   Downloaded libz-sys v1.1.6
[INFO] [stderr]   Downloaded curl-sys v0.4.54+curl-7.83.0
[INFO] [stderr]   Downloaded hts-sys v2.0.2
[INFO] [stderr]   Downloaded openssl-src v111.18.0+1.1.1n
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] fbead3c160b6a734cd88683172084f0c7b638dc4e8ed87caa3abf44396b14fc4
[INFO] running `Command { std: "docker" "start" "-a" "fbead3c160b6a734cd88683172084f0c7b638dc4e8ed87caa3abf44396b14fc4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fbead3c160b6a734cd88683172084f0c7b638dc4e8ed87caa3abf44396b14fc4", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fbead3c160b6a734cd88683172084f0c7b638dc4e8ed87caa3abf44396b14fc4", kill_on_drop: false }`
[INFO] [stdout] fbead3c160b6a734cd88683172084f0c7b638dc4e8ed87caa3abf44396b14fc4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+642c19bfc3a5c1de985bf5d0cc8207ac9d22708a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 91b7203657413ecdeeaf2fb15f810f056dd9d3ea4a9755f58b004ab88601a4ca
[INFO] running `Command { std: "docker" "start" "-a" "91b7203657413ecdeeaf2fb15f810f056dd9d3ea4a9755f58b004ab88601a4ca", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.125
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling proc-macro2 v1.0.38
[INFO] [stderr]    Compiling unicode-xid v0.2.3
[INFO] [stderr]    Compiling syn v1.0.92
[INFO] [stderr]    Compiling rustversion v1.0.6
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]     Checking tinyvec_macros v0.1.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking tinyvec v1.6.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking matches v0.1.9
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]     Checking aho-corasick v0.7.18
[INFO] [stderr]    Compiling indexmap v1.8.1
[INFO] [stderr]     Checking unicode-bidi v0.3.8
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking form_urlencoded v1.0.1
[INFO] [stderr]    Compiling jobserver v0.1.24
[INFO] [stderr]     Checking regex v1.5.5
[INFO] [stderr]    Compiling anyhow v1.0.57
[INFO] [stderr]    Compiling heck v0.4.0
[INFO] [stderr]     Checking os_str_bytes v6.0.0
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking unicode-normalization v0.1.19
[INFO] [stderr]     Checking clap_lex v0.2.0
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking termcolor v1.1.3
[INFO] [stderr]     Checking textwrap v0.15.0
[INFO] [stderr]    Compiling cmake v0.1.48
[INFO] [stderr]    Compiling openssl-src v111.18.0+1.1.1n
[INFO] [stderr]    Compiling libz-sys v1.1.6
[INFO] [stderr]    Compiling openssl-sys v0.9.73
[INFO] [stderr]    Compiling curl-sys v0.4.54+curl-7.83.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling hts-sys v2.0.2
[INFO] [stderr]     Checking idna v0.2.3
[INFO] [stderr]     Checking url v2.2.2
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.31
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.23.1
[INFO] [stderr]    Compiling clap_derive v3.1.7
[INFO] [stderr]     Checking thiserror v1.0.31
[INFO] [stderr]     Checking bio-types v0.12.1
[INFO] [stderr]     Checking clap v3.1.17
[INFO] [stderr]     Checking rust-htslib v0.38.2
[INFO] [stderr]     Checking dedup_merged_bams v0.1.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 05s
[INFO] running `Command { std: "docker" "inspect" "91b7203657413ecdeeaf2fb15f810f056dd9d3ea4a9755f58b004ab88601a4ca", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "91b7203657413ecdeeaf2fb15f810f056dd9d3ea4a9755f58b004ab88601a4ca", kill_on_drop: false }`
[INFO] [stdout] 91b7203657413ecdeeaf2fb15f810f056dd9d3ea4a9755f58b004ab88601a4ca
