[INFO] cloning repository https://github.com/bipmed/brave-import
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bipmed/brave-import" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbipmed%2Fbrave-import", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbipmed%2Fbrave-import'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] a32fc195bd0e4e477cf52a2ed5510aff0e304cc9
[INFO] checking bipmed/brave-import against master#779e19d8baa3e3625bd4fc5c85cbb2ad47b43155 for pr-147589-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbipmed%2Fbrave-import" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/bipmed/brave-import
[INFO] finished tweaking git repo https://github.com/bipmed/brave-import
[INFO] tweaked toml for git repo https://github.com/bipmed/brave-import written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/bipmed/brave-import on toolchain 779e19d8baa3e3625bd4fc5c85cbb2ad47b43155
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+779e19d8baa3e3625bd4fc5c85cbb2ad47b43155" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/bipmed/brave-import already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+779e19d8baa3e3625bd4fc5c85cbb2ad47b43155" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded simba v0.5.1
[INFO] [stderr]   Downloaded num-rational v0.4.0
[INFO] [stderr]   Downloaded tinyvec v1.5.0
[INFO] [stderr]   Downloaded openssl-sys v0.9.70
[INFO] [stderr]   Downloaded clap_derive v3.1.18
[INFO] [stderr]   Downloaded os_str_bytes v6.1.0
[INFO] [stderr]   Downloaded libm v0.2.2
[INFO] [stderr]   Downloaded statrs v0.15.0
[INFO] [stderr]   Downloaded nalgebra v0.27.1
[INFO] [stderr]   Downloaded clap_lex v0.2.0
[INFO] [stderr]   Downloaded libc v0.2.106
[INFO] [stderr]   Downloaded rust-htslib v0.39.5
[INFO] [stderr]   Downloaded serde_json v1.0.69
[INFO] [stderr]   Downloaded cmake v0.1.46
[INFO] [stderr]   Downloaded clap v3.1.18
[INFO] [stderr]   Downloaded curl-sys v0.4.50+curl-7.79.1
[INFO] [stderr]   Downloaded hts-sys v2.0.2
[INFO] [stderr]   Downloaded bio-types v0.12.0
[INFO] [stderr]   Downloaded openssl-src v300.0.2+3.0.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+779e19d8baa3e3625bd4fc5c85cbb2ad47b43155" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] c436a5d2a1e4f6ac40bcbb4d5ef6d552eebfb9b5db7dcc05305b3161e257a4f2
[INFO] running `Command { std: "docker" "start" "-a" "c436a5d2a1e4f6ac40bcbb4d5ef6d552eebfb9b5db7dcc05305b3161e257a4f2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c436a5d2a1e4f6ac40bcbb4d5ef6d552eebfb9b5db7dcc05305b3161e257a4f2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c436a5d2a1e4f6ac40bcbb4d5ef6d552eebfb9b5db7dcc05305b3161e257a4f2", kill_on_drop: false }`
[INFO] [stdout] c436a5d2a1e4f6ac40bcbb4d5ef6d552eebfb9b5db7dcc05305b3161e257a4f2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+779e19d8baa3e3625bd4fc5c85cbb2ad47b43155" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 153363f514af0ebcf6a496ac5e9e6a89077956ff3903b642cf5908052c67c97d
[INFO] running `Command { std: "docker" "start" "-a" "153363f514af0ebcf6a496ac5e9e6a89077956ff3903b642cf5908052c67c97d", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.106
[INFO] [stderr]    Compiling pkg-config v0.3.22
[INFO] [stderr]    Compiling proc-macro2 v1.0.32
[INFO] [stderr]    Compiling syn v1.0.81
[INFO] [stderr]    Compiling libm v0.2.2
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]     Checking pin-project-lite v0.2.7
[INFO] [stderr]     Checking bytes v1.1.0
[INFO] [stderr]    Compiling futures-core v0.3.17
[INFO] [stderr]    Compiling tokio v1.14.0
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling futures-task v0.3.17
[INFO] [stderr]    Compiling futures-util v0.3.17
[INFO] [stderr]    Compiling serde_derive v1.0.130
[INFO] [stderr]     Checking matches v0.1.9
[INFO] [stderr]    Compiling openssl v0.10.38
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]     Checking tinyvec v1.5.0
[INFO] [stderr]     Checking tracing-core v0.1.21
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling serde v1.0.130
[INFO] [stderr]    Compiling httparse v1.5.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking ppv-lite86 v0.2.15
[INFO] [stderr]     Checking slab v0.4.5
[INFO] [stderr]     Checking http v0.2.5
[INFO] [stderr]     Checking futures-io v0.3.17
[INFO] [stderr]     Checking once_cell v1.8.0
[INFO] [stderr]    Compiling native-tls v0.2.8
[INFO] [stderr]    Compiling futures-channel v0.3.17
[INFO] [stderr]     Checking futures-sink v0.3.17
[INFO] [stderr]     Checking tracing v0.1.29
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking form_urlencoded v1.0.1
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling num-rational v0.4.0
[INFO] [stderr]     Checking openssl-probe v0.1.4
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking unicode-bidi v0.3.7
[INFO] [stderr]     Checking unicode-normalization v0.1.19
[INFO] [stderr]    Compiling typenum v1.15.0
[INFO] [stderr]     Checking want v0.3.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling quote v1.0.10
[INFO] [stderr]     Checking tower-service v0.3.1
[INFO] [stderr]    Compiling paste v1.0.7
[INFO] [stderr]    Compiling encoding_rs v0.8.29
[INFO] [stderr]     Checking httpdate v1.0.2
[INFO] [stderr]    Compiling serde_json v1.0.69
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking matrixmultiply v0.3.2
[INFO] [stderr]    Compiling jobserver v0.1.24
[INFO] [stderr]     Checking idna v0.2.3
[INFO] [stderr]     Checking regex v1.5.4
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling heck v0.4.0
[INFO] [stderr]     Checking os_str_bytes v6.1.0
[INFO] [stderr]     Checking clap_lex v0.2.0
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]     Checking mio v0.7.14
[INFO] [stderr]     Checking getrandom v0.2.3
[INFO] [stderr]    Compiling cc v1.0.71
[INFO] [stderr]     Checking socket2 v0.4.2
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-complex v0.4.2
[INFO] [stderr]     Checking url v2.2.2
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking textwrap v0.15.0
[INFO] [stderr]     Checking ipnet v2.3.1
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking termcolor v1.1.2
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand v0.8.4
[INFO] [stderr]     Checking simba v0.5.1
[INFO] [stderr]    Compiling openssl-src v300.0.2+3.0.0
[INFO] [stderr]    Compiling cmake v0.1.46
[INFO] [stderr]    Compiling openssl-sys v0.9.70
[INFO] [stderr]    Compiling libz-sys v1.1.3
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling curl-sys v0.4.50+curl-7.79.1
[INFO] [stderr]    Compiling hts-sys v2.0.2
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]     Checking http-body v0.4.4
[INFO] [stderr]     Checking tokio-util v0.6.9
[INFO] [stderr]     Checking h2 v0.3.7
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.30
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.20.1
[INFO] [stderr]    Compiling clap_derive v3.1.18
[INFO] [stderr]     Checking thiserror v1.0.30
[INFO] [stderr]     Checking bio-types v0.12.0
[INFO] [stderr]     Checking clap v3.1.18
[INFO] [stderr]     Checking hyper v0.14.15
[INFO] [stderr]     Checking nalgebra v0.27.1
[INFO] [stderr]     Checking serde_urlencoded v0.7.0
[INFO] [stderr]     Checking statrs v0.15.0
[INFO] [stderr]     Checking tokio-native-tls v0.3.0
[INFO] [stderr]     Checking hyper-tls v0.5.0
[INFO] [stderr]     Checking reqwest v0.11.6
[INFO] [stderr]     Checking rust-htslib v0.39.5
[INFO] [stderr]     Checking brave-import v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 26s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nalgebra v0.27.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] running `Command { std: "docker" "inspect" "153363f514af0ebcf6a496ac5e9e6a89077956ff3903b642cf5908052c67c97d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "153363f514af0ebcf6a496ac5e9e6a89077956ff3903b642cf5908052c67c97d", kill_on_drop: false }`
[INFO] [stdout] 153363f514af0ebcf6a496ac5e9e6a89077956ff3903b642cf5908052c67c97d
