[INFO] fetching crate nucleaze 1.4.0... [INFO] testing nucleaze-1.4.0 against try#a7ee93192a766fb0dafa23def7154fc03cfcfc3e for pr-146989 [INFO] extracting crate nucleaze 1.4.0 into /workspace/builds/worker-7-tc2/source [INFO] started tweaking crates.io crate nucleaze 1.4.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate nucleaze 1.4.0 [INFO] tweaked toml for crates.io crate nucleaze 1.4.0 written to /workspace/builds/worker-7-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate nucleaze 1.4.0 on toolchain a7ee93192a766fb0dafa23def7154fc03cfcfc3e [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate nucleaze 1.4.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 10ac73faf48c767ada793e6a02737aec80c306c8c698a0a16cd802b10867a508 [INFO] running `Command { std: "docker" "start" "-a" "10ac73faf48c767ada793e6a02737aec80c306c8c698a0a16cd802b10867a508", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "10ac73faf48c767ada793e6a02737aec80c306c8c698a0a16cd802b10867a508", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "10ac73faf48c767ada793e6a02737aec80c306c8c698a0a16cd802b10867a508", kill_on_drop: false }` [INFO] [stdout] 10ac73faf48c767ada793e6a02737aec80c306c8c698a0a16cd802b10867a508 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8a6829c18d3c2e1ff348d224ee6c165e0ea475d854a012716ea9b827623d903f [INFO] running `Command { std: "docker" "start" "-a" "8a6829c18d3c2e1ff348d224ee6c165e0ea475d854a012716ea9b827623d903f", kill_on_drop: false }` [INFO] [stderr] Compiling find-msvc-tools v0.1.3 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling anstyle v1.0.13 [INFO] [stderr] Compiling regex-syntax v0.8.6 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling predicates-core v1.0.9 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling rustix v1.1.3 [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling float-cmp v0.10.0 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling virtue v0.0.18 [INFO] [stderr] Compiling bitflags v2.9.4 [INFO] [stderr] Compiling difflib v0.4.0 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling rlimit v0.10.2 [INFO] [stderr] Compiling normalize-line-endings v0.3.0 [INFO] [stderr] Compiling assert_cmd v2.1.1 [INFO] [stderr] Compiling termtree v0.5.1 [INFO] [stderr] Compiling cc v1.2.40 [INFO] [stderr] Compiling crossbeam-queue v0.3.12 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling clap_builder v4.5.54 [INFO] [stderr] Compiling predicates-tree v1.0.12 [INFO] [stderr] Compiling wait-timeout v0.2.1 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling unty v0.0.4 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling bincode_derive v2.0.1 [INFO] [stderr] Compiling num_cpus v1.17.0 [INFO] [stderr] Compiling sysinfo v0.37.2 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling crossbeam v0.8.4 [INFO] [stderr] Compiling rand v0.9.2 [INFO] [stderr] Compiling bincode v2.0.1 [INFO] [stderr] Compiling regex-automata v0.4.11 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling tempfile v3.24.0 [INFO] [stderr] Compiling clap_derive v4.5.49 [INFO] [stderr] Compiling regex v1.11.3 [INFO] [stderr] Compiling bstr v1.12.1 [INFO] [stderr] Compiling predicates v3.1.3 [INFO] [stderr] Compiling clap v4.5.54 [INFO] [stderr] Compiling liblzma v0.3.6 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling needletail v0.6.3 [INFO] [stderr] Compiling nucleaze v1.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 21.20s [INFO] running `Command { std: "docker" "inspect" "8a6829c18d3c2e1ff348d224ee6c165e0ea475d854a012716ea9b827623d903f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8a6829c18d3c2e1ff348d224ee6c165e0ea475d854a012716ea9b827623d903f", kill_on_drop: false }` [INFO] [stdout] 8a6829c18d3c2e1ff348d224ee6c165e0ea475d854a012716ea9b827623d903f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f4e37bb9fcd654f4c894427211d14da641f06b354be30152c4d8a2fbb819ecef [INFO] running `Command { std: "docker" "start" "-a" "f4e37bb9fcd654f4c894427211d14da641f06b354be30152c4d8a2fbb819ecef", kill_on_drop: false }` [INFO] [stderr] Compiling nucleaze v1.4.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.12s [INFO] running `Command { std: "docker" "inspect" "f4e37bb9fcd654f4c894427211d14da641f06b354be30152c4d8a2fbb819ecef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f4e37bb9fcd654f4c894427211d14da641f06b354be30152c4d8a2fbb819ecef", kill_on_drop: false }` [INFO] [stdout] f4e37bb9fcd654f4c894427211d14da641f06b354be30152c4d8a2fbb819ecef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+a7ee93192a766fb0dafa23def7154fc03cfcfc3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 4f0cc4e52f87dba281670235cb0c4f6a4f15dff74ce94ae3319ea52d58ef22a8 [INFO] running `Command { std: "docker" "start" "-a" "4f0cc4e52f87dba281670235cb0c4f6a4f15dff74ce94ae3319ea52d58ef22a8", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.19s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/nucleaze-7ba38f85758ef123) [INFO] [stdout] [INFO] [stdout] running 33 tests [INFO] [stdout] test kmer_ops::tests::test_canonical_encoding_behavior ... ok [INFO] [stdout] test kmer_ops::tests::test_encoding_bit_length ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_longer_sequence ... ok [INFO] [stdout] test kmer_ops::tests::test_empty_reference_set ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_multiple_bases ... ok [INFO] [stdout] test kmer_ops::tests::test_palindromic_sequences ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_processor_diff_vars ... ok [INFO] [stdout] test kmer_ops::tests::test_bit_cap_calculation ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_single_base ... ok [INFO] [stdout] test kmer_ops::tests::test_encoding_consistency ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_too_short ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_partial_match_below_threshold ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_processor_normal_vars ... ok [INFO] [stdout] test kmer_ops::tests::test_repeated_bases ... ok [INFO] [stdout] test kmer_ops::tests::test_canonical ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_length_k ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_rolling_hash ... ok [INFO] [stdout] test kmer_ops::tests::test_threshold_one ... ok [INFO] [stdout] test kmer_ops::tests::test_minimum_k_value ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_no_match ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_exactly_k_length ... ok [INFO] [stdout] test kmer_ops::tests::test_threshold_higher ... ok [INFO] [stdout] test kmer_ops::tests::test_rc_refs ... ok [INFO] [stdout] test kmer_ops::tests::test_single_sequence ... ok [INFO] [stdout] test kmer_ops::tests::test_duplicate_kmers ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_exact_match ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_length_k_plus_one ... ok [INFO] [stdout] test kmer_ops::tests::test_large_reference_set ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_meets_threshold ... ok [INFO] [stdout] test kmer_ops::tests::test_long_sequence_processing ... ok [INFO] [stdout] test kmer_ops::tests::test_process_multiple ... ok [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/nucleaze-43392299e77e9659) [INFO] [stdout] test kmer_ops::tests::test_multiple_k ... ok [INFO] [stdout] test kmer_ops::tests::test_various_thresholds ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 33 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.18s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 33 tests [INFO] [stdout] test kmer_ops::tests::test_bit_cap_calculation ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_longer_sequence ... ok [INFO] [stdout] test kmer_ops::tests::test_empty_reference_set ... ok [INFO] [stdout] test kmer_ops::tests::test_canonical_encoding_behavior ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_multiple_bases ... ok [INFO] [stdout] test kmer_ops::tests::test_encoding_consistency ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_processor_diff_vars ... ok [INFO] [stdout] test kmer_ops::tests::test_encode_single_base ... ok [INFO] [stdout] test kmer_ops::tests::test_encoding_bit_length ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_processor_normal_vars ... ok [INFO] [stdout] test kmer_ops::tests::test_palindromic_sequences ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_exactly_k_length ... ok [INFO] [stdout] test kmer_ops::tests::test_large_reference_set ... ok [INFO] [stdout] test kmer_ops::tests::test_process_multiple ... ok [INFO] [stdout] test kmer_ops::tests::test_single_sequence ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_length_k ... ok [INFO] [stdout] test kmer_ops::tests::test_sequence_length_k_plus_one ... ok [INFO] [stdout] test kmer_ops::tests::test_threshold_one ... ok [INFO] [stdout] test kmer_ops::tests::test_minimum_k_value ... ok [INFO] [stdout] test kmer_ops::tests::test_threshold_higher ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_partial_match_below_threshold ... ok [INFO] [stdout] test kmer_ops::tests::test_rc_refs ... ok [INFO] [stdout] test kmer_ops::tests::test_long_sequence_processing ... ok [INFO] [stdout] test kmer_ops::tests::test_repeated_bases ... ok [INFO] [stdout] test kmer_ops::tests::test_kmer_rolling_hash ... ok [INFO] [stdout] test kmer_ops::tests::test_various_thresholds ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_no_match ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_too_short ... ok [INFO] [stdout] test kmer_ops::tests::test_canonical ... ok [INFO] [stdout] test kmer_ops::tests::test_duplicate_kmers ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_exact_match ... ok [INFO] [stdout] test kmer_ops::tests::test_process_read_meets_threshold ... ok [INFO] [stdout] test kmer_ops::tests::test_multiple_k ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 33 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Running tests/integrations.rs (/opt/rustwide/target/debug/deps/integrations-8733c9f925a3f869) [INFO] [stdout] running 22 tests [INFO] [stdout] test test_duplicate_file_args_error ... ok [INFO] [stdout] test test_duplicate_read_files ... ok [INFO] [stdout] test test_filtering_ambiguous_sequences ... ok [INFO] [stdout] test test_basic_filtering_unpaired ... ok [INFO] [stdout] test test_paired_in_inter_out ... ok [INFO] [stdout] test test_inter_in_paired_out ... ok [INFO] [stdout] test test_missing_required_args ... ok [INFO] [stdout] test test_fasta_output_format ... ok [INFO] [stdout] test test_paired_input_files ... ok [INFO] [stdout] test test_interleaved_input_separate_output ... ok [INFO] [stdout] test test_interleaved ... ok [INFO] [stdout] test test_missing_interleaved_flag_failure ... ok [INFO] [stdout] test test_ref_with_short_seqs_errors ... ok [INFO] [stdout] test test_threads_argument ... ok [INFO] [stdout] test test_serialized_reference_persistence ... ok [INFO] [stdout] test test_serialized_reference ... ok [INFO] [stdout] test test_canonical_kmers ... ok [INFO] [stdout] test test_different_k_values ... ok [INFO] [stdout] test test_minhits_threshold ... ok [INFO] [stdout] test test_inter_in_paired_out_no_flag ... ok [INFO] [stdout] test test_metadata_kmer_functional ... ok [INFO] [stdout] test test_memory_allocation_limits ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- test_memory_allocation_limits stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'test_memory_allocation_limits' (210) panicked at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/ops/function.rs:250:5: [INFO] [stdout] Unexpected failure. [INFO] [stdout] code=101 [INFO] [stdout] stderr=```<8436 bytes total> [INFO] [stdout] ``` [INFO] [stdout] [INFO] [stdout] thread \'main\' (394) panicked at src/core.rs:54:10: [INFO] [stdout] Could not build Rayon Pool with specified thread amount: ThreadPoolBuildError { kind: IOError(Os { code: 11, kind: WouldBlock, message: \"Resource temporarily unavailable\" }) } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x62e3234e2452 - std[b14e17aa63033746]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x62e3234e2452 - std[b14e17aa63033746]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x62e3234e2452 - std[b14e17aa63033746]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x62e3234e2452 - <::print::DisplayBacktrace as core[7ebf52c056bd56a4]::fmt::Display>::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x62e3234f8c3a - ::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x62e3234f8c3a - core[7ebf52c056bd56a4]::fmt::write [INFO] [stdout] 6: 0x62e3234e8be6 - std[b14e17aa63033746]::io::default_write_fmt:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x62e3234e8be6 - ::write_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x62e3234c7bbf - [INFO] [stdout] ``` [INFO] [stdout] 7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 26: 0x62e3234da186 - std[b14e17aa63033746]::panic::catch_unwind::<&dyn core[7ebf52c056bd56a4]::ops::function::Fn<(), Output = i32> + core[7ebf52c056bd56a4]::panic::unwind_safe::RefUnwindSafe + core[7ebf52c056bd56a4]::marker::Sync, i32> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x62e3234da186 - std[b14e17aa63033746]::rt::lang_start_internal::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x62e3234da186 - std[b14e17aa63033746]::panicking::catch_unwind::do_call:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:581:40 [INFO] [stdout] 29: 0x62e3234da186 - std[b14e17aa63033746]::panicking::catch_unwind:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 30: 0x62e3234da186 - std[b14e17aa63033746]::panic::catch_unwind:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x62e3234da186 - std[b14e17aa63033746]::rt::lang_start_internal [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x62e323259e87 - std[b14e17aa63033746]::rt::lang_start::> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:205:5 [INFO] [stdout] 33: 0x62e32327b9ee - main [INFO] [stdout] 34: 0x7a33b1b831ca - [INFO] [stdout] 35: 0x7a33b1b8328b - __libc_start_main [INFO] [stdout] 36: 0x62e323223765 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] ``` [INFO] [stdout] ``` [INFO] [stdout] command=`"/opt/rustwide/target/debug/nucleaze" "--in" "/tmp/.tmpnEY7FW/reads.fq" "--ref" "/tmp/.tmpnEY7FW/ref.fa" "--k" "4" "--maxmem" "1G"` [INFO] [stdout] code=101 [INFO] [stdout] stdout=``` [INFO] [stdout] Nucleaze 1.4.0 [--in /tmp/.tmpnEY7FW/reads.fq --ref /tmp/.tmpnEY7FW/ref.fa --k 4 --maxmem 1G] [INFO] [stdout] Setting memory limit to 1073741824 bytes [INFO] [stdout] ``` [INFO] [stdout] [INFO] [stdout] stderr=<8436 bytes total> [INFO] [stdout] ``` [INFO] [stdout] [INFO] [stdout] thread \'main\' (394) panicked at src/core.rs:54:10: [INFO] [stdout] Could not build Rayon Pool with specified thread amount: ThreadPoolBuildError { kind: IOError(Os { code: 11, kind: WouldBlock, message: \"Resource temporarily unavailable\" }) } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x62e3234e2452 - std[b14e17aa63033746]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x62e3234e2452 - std[b14e17aa63033746]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x62e3234e2452 - std[b14e17aa63033746]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x62e3234e2452 - <::print::DisplayBacktrace as core[7ebf52c056bd56a4]::fmt::Display>::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x62e3234f8c3a - ::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x62e3234f8c3a - core[7ebf52c056bd56a4]::fmt::write [INFO] [stdout] 6: 0x62e3234e8be6 - std[b14e17aa63033746]::io::default_write_fmt:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x62e3234e8be6 - ::write_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x62e3234c7bbf - [INFO] [stdout] ``` [INFO] [stdout] 7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 26: 0x62e3234da186 - std[b14e17aa63033746]::panic::catch_unwind::<&dyn core[7ebf52c056bd56a4]::ops::function::Fn<(), Output = i32> + core[7ebf52c056bd56a4]::panic::unwind_safe::RefUnwindSafe + core[7ebf52c056bd56a4]::marker::Sync, i32> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x62e3234da186 - std[b14e17aa63033746]::rt::lang_start_internal::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x62e3234da186 - std[b14e17aa63033746]::panicking::catch_unwind::do_call:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:581:40 [INFO] [stdout] 29: 0x62e3234da186 - std[b14e17aa63033746]::panicking::catch_unwind:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 30: 0x62e3234da186 - std[b14e17aa63033746]::panic::catch_unwind:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x62e3234da186 - std[b14e17aa63033746]::rt::lang_start_internal [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x62e323259e87 - std[b14e17aa63033746]::rt::lang_start::> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/rt.rs:205:5 [INFO] [stdout] 33: 0x62e32327b9ee - main [INFO] [stdout] 34: 0x7a33b1b831ca - [INFO] [stdout] 35: 0x7a33b1b8328b - __libc_start_main [INFO] [stdout] 36: 0x62e323223765 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] ``` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5f4109613b82 - std[b14e17aa63033746]::backtrace_rs::backtrace::libunwind::trace [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5f4109613b82 - std[b14e17aa63033746]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5f4109613b82 - std[b14e17aa63033746]::sys::backtrace::_print_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:74:9 [INFO] [stdout] 3: 0x5f4109613b82 - <::print::DisplayBacktrace as core[7ebf52c056bd56a4]::fmt::Display>::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:44:26 [INFO] [stdout] 4: 0x5f410962a50a - ::fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/fmt/rt.rs:152:76 [INFO] [stdout] 5: 0x5f410962a50a - core[7ebf52c056bd56a4]::fmt::write [INFO] [stdout] 6: 0x5f4109619ea6 - std[b14e17aa63033746]::io::default_write_fmt::> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5f4109619ea6 - as std[b14e17aa63033746]::io::Write>::write_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/io/mod.rs:1994:13 [INFO] [stdout] 8: 0x5f41095f043f - ::print [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:47:9 [INFO] [stdout] 9: 0x5f41095f043f - std[b14e17aa63033746]::panicking::default_hook::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:292:27 [INFO] [stdout] 10: 0x5f410960b369 - std[b14e17aa63033746]::panicking::default_hook [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:316:9 [INFO] [stdout] 11: 0x5f410955ab7e - core[7ebf52c056bd56a4]::ops::function::Fn<(&'a std[b14e17aa63033746]::panic::PanicHookInfo<'b>,), Output = ()> + core[7ebf52c056bd56a4]::marker::Send + core[7ebf52c056bd56a4]::marker::Sync> as core[7ebf52c056bd56a4]::ops::function::Fn<(&std[b14e17aa63033746]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/alloc/src/boxed.rs:2220:9 [INFO] [stdout] 12: 0x5f410955ab7e - test[3318909d72adbd73]::test_main_with_exit_callback::::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5f410960b522 - core[7ebf52c056bd56a4]::ops::function::Fn<(&'a std[b14e17aa63033746]::panic::PanicHookInfo<'b>,), Output = ()> + core[7ebf52c056bd56a4]::marker::Send + core[7ebf52c056bd56a4]::marker::Sync> as core[7ebf52c056bd56a4]::ops::function::Fn<(&std[b14e17aa63033746]::panic::PanicHookInfo,)>>::call [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/alloc/src/boxed.rs:2220:9 [INFO] [stdout] 14: 0x5f410960b522 - std[b14e17aa63033746]::panicking::panic_with_hook [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:833:13 [INFO] [stdout] 15: 0x5f41095f04f8 - std[b14e17aa63033746]::panicking::panic_handler::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:698:13 [INFO] [stdout] 16: 0x5f41095e7d79 - std[b14e17aa63033746]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:182:18 [INFO] [stdout] 17: 0x5f41095f134d - __rustc[f8abce35e9738d16]::rust_begin_unwind [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:689:5 [INFO] [stdout] 18: 0x5f410962ac9c - core[7ebf52c056bd56a4]::panicking::panic_fmt [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5f41095a93c8 - core[7ebf52c056bd56a4]::panicking::panic_display:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/panicking.rs:259:5 [INFO] [stdout] 20: 0x5f41095a4ea7 - ::panic:: [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/assert_cmd-2.1.1/src/assert.rs:1033:9 [INFO] [stdout] 21: 0x5f41095a9077 - <::panic as core[7ebf52c056bd56a4]::ops::function::FnOnce<(assert_cmd[7babeb43a4aaae2c]::assert::AssertError,)>>::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 22: 0x5f410959abc4 - >::unwrap_or_else::<::panic> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/result.rs:1622:23 [INFO] [stdout] 23: 0x5f41095a7430 - ::success [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/assert_cmd-2.1.1/src/assert.rs:158:28 [INFO] [stdout] 24: 0x5f4109549dc1 - integrations[e4f17f22a0f73284]::test_memory_allocation_limits [INFO] [stdout] at /opt/rustwide/workdir/tests/integrations.rs:414:10 [INFO] [stdout] 25: 0x5f410953e037 - integrations[e4f17f22a0f73284]::test_memory_allocation_limits::{closure#0} [INFO] [stdout] at /opt/rustwide/workdir/tests/integrations.rs:382:35 [INFO] [stdout] 26: 0x5f4109539fc6 - >::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 27: 0x5f410954ef2b - core[7ebf52c056bd56a4]::result::Result<(), alloc[ed4a2d6a5f8966cc]::string::String> as core[7ebf52c056bd56a4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 28: 0x5f410954ef2b - test[3318909d72adbd73]::__rust_begin_short_backtrace::, fn() -> core[7ebf52c056bd56a4]::result::Result<(), alloc[ed4a2d6a5f8966cc]::string::String>> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:663:18 [INFO] [stdout] 29: 0x5f410955b78a - test[3318909d72adbd73]::run_test_in_process::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:686:74 [INFO] [stdout] 30: 0x5f410955b78a - as core[7ebf52c056bd56a4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 31: 0x5f410955b78a - std[b14e17aa63033746]::panicking::catch_unwind::do_call::, core[7ebf52c056bd56a4]::result::Result<(), alloc[ed4a2d6a5f8966cc]::string::String>> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:581:40 [INFO] [stdout] 32: 0x5f410955b78a - std[b14e17aa63033746]::panicking::catch_unwind::, core[7ebf52c056bd56a4]::panic::unwind_safe::AssertUnwindSafe> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 33: 0x5f410955b78a - std[b14e17aa63033746]::panic::catch_unwind::, core[7ebf52c056bd56a4]::result::Result<(), alloc[ed4a2d6a5f8966cc]::string::String>> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 34: 0x5f410955b78a - test[3318909d72adbd73]::run_test_in_process [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:686:27 [INFO] [stdout] 35: 0x5f410955b78a - test[3318909d72adbd73]::run_test::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:607:43 [INFO] [stdout] 36: 0x5f4109556d34 - test[3318909d72adbd73]::run_test::{closure#1} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/test/src/lib.rs:637:41 [INFO] [stdout] 37: 0x5f4109556d34 - std[b14e17aa63033746]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/backtrace.rs:166:18 [INFO] [stdout] 38: 0x5f410955e282 - std[b14e17aa63033746]::thread::lifecycle::spawn_unchecked::::{closure#1}::{closure#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/thread/lifecycle.rs:91:13 [INFO] [stdout] 39: 0x5f410955e282 - ::{closure#1}::{closure#0}> as core[7ebf52c056bd56a4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 40: 0x5f410955e282 - std[b14e17aa63033746]::panicking::catch_unwind::do_call::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:581:40 [INFO] [stdout] 41: 0x5f410955e282 - std[b14e17aa63033746]::panicking::catch_unwind::<(), core[7ebf52c056bd56a4]::panic::unwind_safe::AssertUnwindSafe::{closure#1}::{closure#0}>> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panicking.rs:544:19 [INFO] [stdout] 42: 0x5f410955e282 - std[b14e17aa63033746]::panic::catch_unwind::::{closure#1}::{closure#0}>, ()> [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/panic.rs:359:14 [INFO] [stdout] 43: 0x5f410955e282 - std[b14e17aa63033746]::thread::lifecycle::spawn_unchecked::::{closure#1} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/thread/lifecycle.rs:89:26 [INFO] [stdout] 44: 0x5f410955e282 - ::{closure#1} as core[7ebf52c056bd56a4]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 45: 0x5f410961300f - + core[7ebf52c056bd56a4]::marker::Send> as core[7ebf52c056bd56a4]::ops::function::FnOnce<()>>::call_once [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/alloc/src/boxed.rs:2206:9 [INFO] [stdout] 46: 0x5f410961300f - ::new::thread_start [INFO] [stdout] at /rustc/a7ee93192a766fb0dafa23def7154fc03cfcfc3e/library/std/src/sys/thread/unix.rs:127:17 [INFO] [stdout] 47: 0x7a82ed577aa4 - [INFO] [stdout] 48: 0x7a82ed604a64 - clone [INFO] [stdout] 49: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] test_memory_allocation_limits [INFO] [stdout] [INFO] [stdout] test result: FAILED. 21 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.27s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--test integrations` [INFO] running `Command { std: "docker" "inspect" "4f0cc4e52f87dba281670235cb0c4f6a4f15dff74ce94ae3319ea52d58ef22a8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4f0cc4e52f87dba281670235cb0c4f6a4f15dff74ce94ae3319ea52d58ef22a8", kill_on_drop: false }` [INFO] [stdout] 4f0cc4e52f87dba281670235cb0c4f6a4f15dff74ce94ae3319ea52d58ef22a8