[INFO] cloning repository https://github.com/sriram98v/ml-seqclass [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sriram98v/ml-seqclass" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 08e75cf67659c9258c03150c14af98126623e4a9 [INFO] checking sriram98v/ml-seqclass against master#4068bafedd8ba724e332a5221c06a6fa531a30d2 for pr-146978 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sriram98v/ml-seqclass [INFO] finished tweaking git repo https://github.com/sriram98v/ml-seqclass [INFO] tweaked toml for git repo https://github.com/sriram98v/ml-seqclass written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sriram98v/ml-seqclass on toolchain 4068bafedd8ba724e332a5221c06a6fa531a30d2 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4068bafedd8ba724e332a5221c06a6fa531a30d2" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sriram98v/ml-seqclass already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+4068bafedd8ba724e332a5221c06a6fa531a30d2" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded papergrid v0.17.0 [INFO] [stderr] Downloaded thiserror-impl v1.0.60 [INFO] [stderr] Downloaded shrust v0.0.7 [INFO] [stderr] Downloaded testing_table v0.3.0 [INFO] [stderr] Downloaded prettytable-rs v0.8.0 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded ordered-float v3.9.2 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded term v0.5.2 [INFO] [stderr] Downloaded bio-types v1.0.1 [INFO] [stderr] Downloaded statrs v0.16.0 [INFO] [stderr] Downloaded dirs v1.0.5 [INFO] [stderr] Downloaded wide v0.7.17 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded format_num v0.1.0 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded thiserror v1.0.60 [INFO] [stderr] Downloaded rustversion v1.0.16 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded libsufr v0.7.12 [INFO] [stderr] Downloaded noisy_float v0.2.0 [INFO] [stderr] Downloaded tabled_derive v0.11.0 [INFO] [stderr] Downloaded tabled v0.20.0 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded zip v2.4.1 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded ndarray-stats v0.6.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+4068bafedd8ba724e332a5221c06a6fa531a30d2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 03c6032b7f8d92ed6bdc42c1b03a7ffc72ff71538da1f457b76e969e1a842a2a [INFO] running `Command { std: "docker" "start" "-a" "03c6032b7f8d92ed6bdc42c1b03a7ffc72ff71538da1f457b76e969e1a842a2a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "03c6032b7f8d92ed6bdc42c1b03a7ffc72ff71538da1f457b76e969e1a842a2a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "03c6032b7f8d92ed6bdc42c1b03a7ffc72ff71538da1f457b76e969e1a842a2a", kill_on_drop: false }` [INFO] [stdout] 03c6032b7f8d92ed6bdc42c1b03a7ffc72ff71538da1f457b76e969e1a842a2a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+4068bafedd8ba724e332a5221c06a6fa531a30d2" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f0bc878ae69cf7d6b842ee83aaf7d51da2e1263e34849edf99875fc3e33d5e59 [INFO] running `Command { std: "docker" "start" "-a" "f0bc878ae69cf7d6b842ee83aaf7d51da2e1263e34849edf99875fc3e33d5e59", kill_on_drop: false }` [INFO] [stderr] Compiling once_cell v1.21.1 [INFO] [stderr] Checking either v1.11.0 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling libc v0.2.174 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Checking bytemuck v1.15.0 [INFO] [stderr] Checking log v0.4.26 [INFO] [stderr] Checking getrandom v0.3.3 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Checking anstyle-query v1.0.3 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Compiling rustversion v1.0.16 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking flate2 v1.1.2 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking unicode-width v0.1.12 [INFO] [stderr] Compiling thiserror v1.0.60 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling rustix v1.0.8 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Checking rand_core v0.9.3 [INFO] [stderr] Checking dirs v1.0.5 [INFO] [stderr] Checking lockfree-object-pool v0.1.6 [INFO] [stderr] Compiling zip v2.4.1 [INFO] [stderr] Checking bumpalo v3.17.0 [INFO] [stderr] Checking gimli v0.28.1 [INFO] [stderr] Checking bitflags v2.9.1 [INFO] [stderr] Checking simd-adler32 v0.3.7 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking indexmap v2.10.0 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking term v0.5.2 [INFO] [stderr] Checking regex-automata v0.4.9 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking buffer-redux v1.0.2 [INFO] [stderr] Checking object v0.32.2 [INFO] [stderr] Checking jiff v0.2.15 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling cc v1.0.97 [INFO] [stderr] Checking zopfli v0.8.1 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking num-bigint v0.4.6 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Checking wide v0.7.17 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking bit-vec v0.6.3 [INFO] [stderr] Compiling proc-macro-error-attr2 v2.0.0 [INFO] [stderr] Checking rustc-demangle v0.1.24 [INFO] [stderr] Compiling serde_json v1.0.117 [INFO] [stderr] Checking encode_unicode v0.3.6 [INFO] [stderr] Checking chrono v0.4.41 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Checking papergrid v0.17.0 [INFO] [stderr] Checking bit-set v0.5.3 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking tempfile v3.20.0 [INFO] [stderr] Checking rand v0.9.2 [INFO] [stderr] Checking addr2line v0.21.0 [INFO] [stderr] Checking noisy_float v0.2.0 [INFO] [stderr] Compiling zstd-sys v2.0.15+zstd.1.5.7 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling backtrace v0.3.71 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Checking console v0.15.8 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Checking testing_table v0.3.0 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking itertools v0.13.0 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking num_cpus v1.17.0 [INFO] [stderr] Checking thread_local v1.1.9 [INFO] [stderr] Checking env_filter v0.1.3 [INFO] [stderr] Checking format_num v0.1.0 [INFO] [stderr] Checking smawk v0.3.2 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking unicode-linebreak v0.1.5 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking textwrap v0.16.2 [INFO] [stderr] Checking indicatif v0.17.8 [INFO] [stderr] Checking itertools v0.12.1 [INFO] [stderr] Checking glob v0.3.1 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking env_logger v0.11.8 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking ndarray-stats v0.6.0 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling thiserror-impl v1.0.60 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Checking liblzma v0.3.6 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Compiling tabled_derive v0.11.0 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking tabled v0.20.0 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Checking pest v2.7.15 [INFO] [stderr] Checking bio-types v1.0.1 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Checking serde v1.0.219 [INFO] [stderr] Checking needletail v0.6.3 [INFO] [stderr] Compiling pest_meta v2.7.15 [INFO] [stderr] Compiling pest_generator v2.7.15 [INFO] [stderr] Compiling pest_derive v2.7.15 [INFO] [stderr] Checking py_literal v0.4.0 [INFO] [stderr] Checking ndarray-npy v0.9.1 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking bv v0.11.1 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking libsufr v0.7.12 [INFO] [stderr] Checking prettytable-rs v0.8.0 [INFO] [stderr] Checking shrust v0.0.7 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking seq_class v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.29s [INFO] running `Command { std: "docker" "inspect" "f0bc878ae69cf7d6b842ee83aaf7d51da2e1263e34849edf99875fc3e33d5e59", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f0bc878ae69cf7d6b842ee83aaf7d51da2e1263e34849edf99875fc3e33d5e59", kill_on_drop: false }` [INFO] [stdout] f0bc878ae69cf7d6b842ee83aaf7d51da2e1263e34849edf99875fc3e33d5e59