[INFO] cloning repository https://github.com/keithyin/asts
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/keithyin/asts" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Fasts", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Fasts'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 2a1c25b77e7dcc1761e57989b7e25a3687e6edf3
[INFO] checking keithyin/asts against master#ddaf12390d3ffb7d5ba74491a48f3cd528e5d777 for pr-146504
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Fasts" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/keithyin/asts
[INFO] finished tweaking git repo https://github.com/keithyin/asts
[INFO] tweaked toml for git repo https://github.com/keithyin/asts written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/keithyin/asts on toolchain ddaf12390d3ffb7d5ba74491a48f3cd528e5d777
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ddaf12390d3ffb7d5ba74491a48f3cd528e5d777" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/keithyin/asts already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ddaf12390d3ffb7d5ba74491a48f3cd528e5d777" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded cmake v0.1.52
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded gskits v0.15.15
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded objc2-core-foundation v0.3.0
[INFO] [stderr]   Downloaded minimap2 v0.1.23+minimap2.2.28
[INFO] [stderr]   Downloaded clap_derive v4.5.24
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded sysinfo v0.34.2
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded mm2 v0.23.1
[INFO] [stderr]   Downloaded bio v2.0.3
[INFO] [stderr]   Downloaded minimap2-sys v0.1.21+minimap2.2.28
[INFO] [stderr]   Downloaded needletail v0.6.1
[INFO] [stderr]   Downloaded libz-sys v1.1.21
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded gskits v0.13.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ddaf12390d3ffb7d5ba74491a48f3cd528e5d777" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3b2d2672cd2abcc2dc42e4a3abd76deebeab62fcf9e753d4689b229841f400b8
[INFO] running `Command { std: "docker" "start" "-a" "3b2d2672cd2abcc2dc42e4a3abd76deebeab62fcf9e753d4689b229841f400b8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3b2d2672cd2abcc2dc42e4a3abd76deebeab62fcf9e753d4689b229841f400b8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3b2d2672cd2abcc2dc42e4a3abd76deebeab62fcf9e753d4689b229841f400b8", kill_on_drop: false }`
[INFO] [stdout] 3b2d2672cd2abcc2dc42e4a3abd76deebeab62fcf9e753d4689b229841f400b8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ddaf12390d3ffb7d5ba74491a48f3cd528e5d777" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 98ab6bc1f07bb5927cfd5e5db81d5d25d42c40f69897e2b3636e895fcd0c0b9e
[INFO] running `Command { std: "docker" "start" "-a" "98ab6bc1f07bb5927cfd5e5db81d5d25d42c40f69897e2b3636e895fcd0c0b9e", kill_on_drop: false }`
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling cc v1.2.10
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]     Checking serde v1.0.217
[INFO] [stderr]     Checking zerocopy v0.7.35
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling libloading v0.8.6
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling bitflags v2.8.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking csv-core v0.1.11
[INFO] [stderr]    Compiling serde_json v1.0.137
[INFO] [stderr]     Checking bytecount v0.6.8
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking form_urlencoded v1.2.1
[INFO] [stderr]     Checking tracing v0.1.41
[INFO] [stderr]     Checking simba v0.8.1
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]     Checking console v0.15.10
[INFO] [stderr]     Checking simba v0.6.0
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking ordered-float v4.6.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.20
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking url v2.5.4
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]     Checking sha1_smol v1.0.1
[INFO] [stderr]     Checking tracing-log v0.2.0
[INFO] [stderr]     Checking indicatif v0.17.9
[INFO] [stderr]    Compiling cmake v0.1.52
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]    Compiling openssl-src v300.4.1+3.4.0
[INFO] [stderr]     Checking uuid v1.12.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking time v0.3.37
[INFO] [stderr]     Checking chrono v0.4.39
[INFO] [stderr]     Checking buffer-redux v1.0.2
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]     Checking clap_builder v4.5.27
[INFO] [stderr]     Checking ndarray v0.15.6
[INFO] [stderr]     Checking needletail v0.6.1
[INFO] [stderr]     Checking crossbeam-queue v0.3.12
[INFO] [stderr]     Checking ordered-float v3.9.2
[INFO] [stderr]    Compiling clap_derive v4.5.24
[INFO] [stderr]     Checking itertools v0.11.0
[INFO] [stderr]    Compiling libz-sys v1.1.21
[INFO] [stderr]    Compiling openssl-sys v0.9.104
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]     Checking csv v1.3.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking multimap v0.10.0
[INFO] [stderr]    Compiling minimap2-sys v0.1.21+minimap2.2.28
[INFO] [stderr]     Checking tracing-serde v0.2.0
[INFO] [stderr]     Checking multimap v0.9.1
[INFO] [stderr]     Checking strum v0.25.0
[INFO] [stderr]     Checking crossbeam v0.8.4
[INFO] [stderr]     Checking sysinfo v0.34.2
[INFO] [stderr]     Checking half v1.8.3
[INFO] [stderr]     Checking tracing-subscriber v0.3.19
[INFO] [stderr]     Checking tinytemplate v1.2.1
[INFO] [stderr]     Checking criterion-plot v0.4.5
[INFO] [stderr]     Checking clap v4.5.27
[INFO] [stderr]     Checking serde_cbor v0.11.2
[INFO] [stderr]     Checking clap v2.34.0
[INFO] [stderr]     Checking plotters v0.3.7
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking oorandom v11.1.4
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]     Checking nalgebra v0.32.6
[INFO] [stderr]     Checking criterion v0.3.6
[INFO] [stderr]     Checking tracing-appender v0.2.3
[INFO] [stderr]     Checking minimap2 v0.1.23+minimap2.2.28
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking statrs v0.17.1
[INFO] [stderr]     Checking bio v2.0.3
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v1.6.0
[INFO] [stderr]     Checking rust-htslib v0.49.0
[INFO] [stderr]     Checking gskits v0.13.0
[INFO] [stderr]     Checking gskits v0.15.15
[INFO] [stderr]     Checking mm2 v0.23.1
[INFO] [stderr]     Checking asts v0.15.6 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `bam_header_ext::BamHeaderExt`
[INFO] [stdout]  --> src/lib.rs:9:23
[INFO] [stdout]   |
[INFO] [stdout] 9 | use ::gskits::gsbam::{bam_header_ext::BamHeaderExt, bam_record_ext::BamRecordExt};
[INFO] [stdout]   |                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `bam_header_ext::BamHeaderExt`
[INFO] [stdout]  --> src/lib.rs:9:23
[INFO] [stdout]   |
[INFO] [stdout] 9 | use ::gskits::gsbam::{bam_header_ext::BamHeaderExt, bam_record_ext::BamRecordExt};
[INFO] [stdout]   |                       ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `mm`, `ins`, `homo_ins`, `del`, and `homo_del` are never read
[INFO] [stdout]   --> src/sbr_and_ref_to_cs.rs:27:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | struct Cs2RefAlnRes {
[INFO] [stdout]    |        ------------ fields in this struct
[INFO] [stdout] 26 |     identity: f32,
[INFO] [stdout] 27 |     mm: u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout] 28 |     ins: u32,
[INFO] [stdout]    |     ^^^
[INFO] [stdout] 29 |     homo_ins: u32,
[INFO] [stdout]    |     ^^^^^^^^
[INFO] [stdout] 30 |     del: u32,
[INFO] [stdout]    |     ^^^
[INFO] [stdout] 31 |     homo_del: u32,
[INFO] [stdout]    |     ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Cs2RefAlnRes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: fields `mm`, `ins`, `homo_ins`, `del`, and `homo_del` are never read
[INFO] [stdout]   --> src/sbr_and_ref_to_cs.rs:27:5
[INFO] [stdout]    |
[INFO] [stdout] 25 | struct Cs2RefAlnRes {
[INFO] [stdout]    |        ------------ fields in this struct
[INFO] [stdout] 26 |     identity: f32,
[INFO] [stdout] 27 |     mm: u32,
[INFO] [stdout]    |     ^^
[INFO] [stdout] 28 |     ins: u32,
[INFO] [stdout]    |     ^^^
[INFO] [stdout] 29 |     homo_ins: u32,
[INFO] [stdout]    |     ^^^^^^^^
[INFO] [stdout] 30 |     del: u32,
[INFO] [stdout]    |     ^^^
[INFO] [stdout] 31 |     homo_del: u32,
[INFO] [stdout]    |     ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Cs2RefAlnRes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `recv`
[INFO] [stdout]   --> benches/benchmark.rs:18:17
[INFO] [stdout]    |
[INFO] [stdout] 18 |             let recv = black_box(recv);
[INFO] [stdout]    |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_recv`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 19s
[INFO] running `Command { std: "docker" "inspect" "98ab6bc1f07bb5927cfd5e5db81d5d25d42c40f69897e2b3636e895fcd0c0b9e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "98ab6bc1f07bb5927cfd5e5db81d5d25d42c40f69897e2b3636e895fcd0c0b9e", kill_on_drop: false }`
[INFO] [stdout] 98ab6bc1f07bb5927cfd5e5db81d5d25d42c40f69897e2b3636e895fcd0c0b9e