[INFO] cloning repository https://github.com/lorewar2/bio_exp
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/lorewar2/bio_exp" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Florewar2%2Fbio_exp", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Florewar2%2Fbio_exp'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 48bbb4f81b7c08244bcde288ad821f45a4cd1287
[INFO] checking lorewar2/bio_exp against master#9e293ae9f8abecb0be5105787d181518c9012a19 for pr-146440-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Florewar2%2Fbio_exp" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/lorewar2/bio_exp
[INFO] finished tweaking git repo https://github.com/lorewar2/bio_exp
[INFO] tweaked toml for git repo https://github.com/lorewar2/bio_exp written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/lorewar2/bio_exp on toolchain 9e293ae9f8abecb0be5105787d181518c9012a19
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9e293ae9f8abecb0be5105787d181518c9012a19" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/lorewar2/bio_exp already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9e293ae9f8abecb0be5105787d181518c9012a19" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 172 packages to latest compatible versions
[INFO] [stderr]       Adding aho-corasick v1.1.4
[INFO] [stderr]       Adding anyhow v1.0.102
[INFO] [stderr]       Adding approx v0.5.1
[INFO] [stderr]       Adding autocfg v1.5.1
[INFO] [stderr]       Adding bindgen v0.69.5
[INFO] [stderr]       Adding bio v3.0.0
[INFO] [stderr]       Adding bio-types v1.0.4
[INFO] [stderr]       Adding bit-set v0.8.0
[INFO] [stderr]       Adding bit-vec v0.8.0
[INFO] [stderr]       Adding bitflags v2.12.1
[INFO] [stderr]       Adding bv v0.11.1
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[INFO] [stderr]       Adding byteorder v1.5.0
[INFO] [stderr]       Adding bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]       Adding cc v1.2.63
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[INFO] [stderr]       Adding cfg-if v1.0.4
[INFO] [stderr]       Adding clang-sys v1.8.1
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[INFO] [stderr]       Adding csv v1.4.0
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[INFO] [stderr]       Adding curl-sys v0.4.88+curl-8.20.0
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[INFO] [stderr]       Adding getset v0.1.6
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[INFO] [stderr]       Adding hashbrown v0.15.5
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[INFO] [stderr]       Adding heck v0.5.0
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[INFO] [stderr]       Adding icu_collections v2.2.0
[INFO] [stderr]       Adding icu_locale_core v2.2.0
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[INFO] [stderr]       Adding ndarray v0.16.1
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[INFO] [stderr]       Adding num-rational v0.4.2
[INFO] [stderr]       Adding num-traits v0.2.19
[INFO] [stderr]       Adding openssl-src v300.6.0+3.6.2
[INFO] [stderr]       Adding openssl-sys v0.9.116
[INFO] [stderr]       Adding ordered-float v5.3.0
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[INFO] [stderr]       Adding potential_utf v0.1.5
[INFO] [stderr]       Adding ppv-lite86 v0.2.21
[INFO] [stderr]       Adding proc-macro-error-attr2 v2.0.0
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[INFO] [stderr]       Adding r-efi v5.3.0
[INFO] [stderr]       Adding rand v0.8.6 (available: v0.10.1)
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[INFO] [stderr]       Adding regex-automata v0.4.14
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[INFO] [stderr]       Adding rust-htslib v1.0.0
[INFO] [stderr]       Adding rustc-hash v1.1.0
[INFO] [stderr]       Adding rustc_version v0.1.7
[INFO] [stderr]       Adding rustversion v1.0.22
[INFO] [stderr]       Adding ryu v1.0.23
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[INFO] [stderr]       Adding semver v0.1.20
[INFO] [stderr]       Adding serde v1.0.228
[INFO] [stderr]       Adding serde_core v1.0.228
[INFO] [stderr]       Adding serde_derive v1.0.228
[INFO] [stderr]       Adding shlex v1.3.0
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[INFO] [stderr]       Adding stable_deref_trait v1.2.1
[INFO] [stderr]       Adding statrs v0.16.1 (available: v0.18.0)
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[INFO] [stderr]       Adding synstructure v0.13.2
[INFO] [stderr]       Adding thiserror v1.0.69
[INFO] [stderr]       Adding thiserror v2.0.18
[INFO] [stderr]       Adding thiserror-impl v1.0.69
[INFO] [stderr]       Adding thiserror-impl v2.0.18
[INFO] [stderr]       Adding tinystr v0.8.3
[INFO] [stderr]       Adding triple_accel v0.4.0
[INFO] [stderr]       Adding typenum v1.20.1
[INFO] [stderr]       Adding unicode-ident v1.0.24
[INFO] [stderr]       Adding unicode-xid v0.1.0
[INFO] [stderr]       Adding url v2.5.8
[INFO] [stderr]       Adding utf8_iter v1.0.4
[INFO] [stderr]       Adding vcpkg v0.2.15
[INFO] [stderr]       Adding vec_map v0.8.2
[INFO] [stderr]       Adding wasi v0.11.1+wasi-snapshot-preview1
[INFO] [stderr]       Adding wasip2 v1.0.3+wasi-0.2.9
[INFO] [stderr]       Adding wide v0.7.33
[INFO] [stderr]       Adding windows-link v0.2.1
[INFO] [stderr]       Adding windows-sys v0.61.2
[INFO] [stderr]       Adding wit-bindgen v0.57.1
[INFO] [stderr]       Adding writeable v0.6.3
[INFO] [stderr]       Adding yoke v0.8.2
[INFO] [stderr]       Adding yoke-derive v0.8.2
[INFO] [stderr]       Adding zerocopy v0.8.50
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[INFO] [stderr]       Adding zerofrom v0.1.8
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[INFO] [stderr]       Adding zerovec v0.11.6
[INFO] [stderr]       Adding zerovec-derive v0.11.3
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded derefable v0.1.0
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded logaddexp v0.1.4
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded getset v0.1.6
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded rust-htslib v1.0.0
[INFO] [stderr]   Downloaded libm v0.1.4
[INFO] [stderr]   Downloaded bio v3.0.0
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded nalgebra v0.33.3
[INFO] [stderr]   Downloaded libz-sys v1.1.29
[INFO] [stderr]   Downloaded curl-sys v0.4.88+curl-8.20.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.6.0+3.6.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+9e293ae9f8abecb0be5105787d181518c9012a19" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e7cf39f9be8c9539456507e74fa9d73ab42e63f60758a359f1b9ac5abc899275
[INFO] running `Command { std: "docker" "start" "-a" "e7cf39f9be8c9539456507e74fa9d73ab42e63f60758a359f1b9ac5abc899275", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e7cf39f9be8c9539456507e74fa9d73ab42e63f60758a359f1b9ac5abc899275", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e7cf39f9be8c9539456507e74fa9d73ab42e63f60758a359f1b9ac5abc899275", kill_on_drop: false }`
[INFO] [stdout] e7cf39f9be8c9539456507e74fa9d73ab42e63f60758a359f1b9ac5abc899275
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+9e293ae9f8abecb0be5105787d181518c9012a19" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cb9ed70d980748ea608a7fcf6fdb7d0657806781b49b3fdeafce1162d1b67ac3
[INFO] running `Command { std: "docker" "start" "-a" "cb9ed70d980748ea608a7fcf6fdb7d0657806781b49b3fdeafce1162d1b67ac3", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]    Compiling autocfg v1.5.1
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.106
[INFO] [stderr]    Compiling quote v1.0.45
[INFO] [stderr]    Compiling pkg-config v0.3.33
[INFO] [stderr]    Compiling zerocopy v0.8.50
[INFO] [stderr]     Checking bytemuck v1.25.0
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[INFO] [stderr]    Compiling clang-sys v1.8.1
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[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
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[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]     Checking wide v0.7.33
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[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
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[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]     Checking getrandom v0.2.17
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[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]     Checking num-complex v0.4.6
[INFO] [stderr]     Checking approx v0.5.1
[INFO] [stderr]     Checking num-integer v0.1.46
[INFO] [stderr]    Compiling nom v7.1.3
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[INFO] [stderr]    Compiling cmake v0.1.58
[INFO] [stderr]    Compiling openssl-src v300.6.0+3.6.2
[INFO] [stderr]    Compiling either v1.16.0
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling semver v0.1.20
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[INFO] [stderr]    Compiling libz-sys v1.1.29
[INFO] [stderr]    Compiling openssl-sys v0.9.116
[INFO] [stderr]    Compiling curl-sys v0.4.88+curl-8.20.0
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[INFO] [stderr]     Checking rand_chacha v0.3.1
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[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]     Checking rand_distr v0.4.3
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]     Checking num-rational v0.4.2
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]    Compiling quick-error v1.2.3
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[INFO] [stderr]     Checking typenum v1.20.1
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[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
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[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking hashbrown v0.17.1
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[INFO] [stderr]    Compiling yoke-derive v0.8.2
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[INFO] [stderr]    Compiling displaydoc v0.2.6
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]     Checking zerofrom v0.1.8
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[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking zerovec v0.11.6
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[INFO] [stderr]     Checking icu_provider v2.2.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]     Checking icu_normalizer v2.2.0
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[INFO] [stderr]    Compiling strum_macros v0.26.4
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[INFO] [stderr]     Checking thiserror v2.0.18
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[INFO] [stderr]     Checking bio-types v1.0.4
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[INFO] [stderr]    Compiling libm v0.1.4
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking csv v1.4.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking petgraph v0.8.3
[INFO] [stderr]     Checking itertools v0.14.0
[INFO] [stderr]    Compiling derefable v0.1.0
[INFO] [stderr]     Checking bit-set v0.8.0
[INFO] [stderr]     Checking enum-map v2.7.3
[INFO] [stderr]    Compiling getset v0.1.6
[INFO] [stderr]     Checking nalgebra v0.33.3
[INFO] [stderr]     Checking url v2.5.8
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking vec_map v0.8.2
[INFO] [stderr]     Checking multimap v0.10.1
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]     Checking ndarray v0.16.1
[INFO] [stderr]     Checking ordered-float v5.3.0
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking fixedbitset v0.4.2
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking bytecount v0.6.9
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]     Checking editdistancek v1.0.2
[INFO] [stderr]     Checking triple_accel v0.4.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking petgraph v0.6.5
[INFO] [stderr]     Checking logaddexp v0.1.4
[INFO] [stderr]     Checking nalgebra v0.29.0
[INFO] [stderr]     Checking statrs v0.18.0
[INFO] [stderr]     Checking statrs v0.16.1
[INFO] [stderr]     Checking bio v3.0.0
[INFO] [stderr]     Checking rust-htslib v1.0.0
[INFO] [stderr]     Checking bio_exp v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/main.rs:50:17
[INFO] [stdout]    |
[INFO] [stdout] 50 |             let mut hets = 0;
[INFO] [stdout]    |                 ----^^^^
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `total` is assigned to, but never used
[INFO] [stdout]   --> src/main.rs:49:17
[INFO] [stdout]    |
[INFO] [stdout] 49 |             let mut total = 0;
[INFO] [stdout]    |                 ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_total` instead
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `hets`
[INFO] [stdout]   --> src/main.rs:50:17
[INFO] [stdout]    |
[INFO] [stdout] 50 |             let mut hets = 0;
[INFO] [stdout]    |                 ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_hets`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/main.rs:51:18
[INFO] [stdout]    |
[INFO] [stdout] 51 |             for (i, _rec) in vcf_reader.records().enumerate() {
[INFO] [stdout]    |                  ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `pos`
[INFO] [stdout]   --> src/main.rs:54:21
[INFO] [stdout]    |
[INFO] [stdout] 54 |                 let pos = rec.pos();
[INFO] [stdout]    |                     ^^^ help: if this is intentional, prefix it with an underscore: `_pos`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `rec_chrom`
[INFO] [stdout]   --> src/main.rs:61:21
[INFO] [stdout]    |
[INFO] [stdout] 61 |                 let rec_chrom = rec.rid().expect("could not unwrap vcf record id");
[INFO] [stdout]    |                     ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_rec_chrom`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `genotype`
[INFO] [stdout]   --> src/main.rs:63:21
[INFO] [stdout]    |
[INFO] [stdout] 63 |                 let genotype = genotypes.get(0); // assume only 1 and get the first one
[INFO] [stdout]    |                     ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_genotype`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `total` is never read
[INFO] [stdout]   --> src/main.rs:52:17
[INFO] [stdout]    |
[INFO] [stdout] 52 |                 total += 1;
[INFO] [stdout]    |                 ^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/main.rs:50:17
[INFO] [stdout]    |
[INFO] [stdout] 50 |             let mut hets = 0;
[INFO] [stdout]    |                 ----^^^^
[INFO] [stdout]    |                 |
[INFO] [stdout]    |                 help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `total` is assigned to, but never used
[INFO] [stdout]   --> src/main.rs:49:17
[INFO] [stdout]    |
[INFO] [stdout] 49 |             let mut total = 0;
[INFO] [stdout]    |                 ^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_total` instead
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `hets`
[INFO] [stdout]   --> src/main.rs:50:17
[INFO] [stdout]    |
[INFO] [stdout] 50 |             let mut hets = 0;
[INFO] [stdout]    |                 ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_hets`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/main.rs:51:18
[INFO] [stdout]    |
[INFO] [stdout] 51 |             for (i, _rec) in vcf_reader.records().enumerate() {
[INFO] [stdout]    |                  ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `pos`
[INFO] [stdout]   --> src/main.rs:54:21
[INFO] [stdout]    |
[INFO] [stdout] 54 |                 let pos = rec.pos();
[INFO] [stdout]    |                     ^^^ help: if this is intentional, prefix it with an underscore: `_pos`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `rec_chrom`
[INFO] [stdout]   --> src/main.rs:61:21
[INFO] [stdout]    |
[INFO] [stdout] 61 |                 let rec_chrom = rec.rid().expect("could not unwrap vcf record id");
[INFO] [stdout]    |                     ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_rec_chrom`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `genotype`
[INFO] [stdout]   --> src/main.rs:63:21
[INFO] [stdout]    |
[INFO] [stdout] 63 |                 let genotype = genotypes.get(0); // assume only 1 and get the first one
[INFO] [stdout]    |                     ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_genotype`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `total` is never read
[INFO] [stdout]   --> src/main.rs:52:17
[INFO] [stdout]    |
[INFO] [stdout] 52 |                 total += 1;
[INFO] [stdout]    |                 ^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 57s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: proc-macro-error2 v2.0.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] running `Command { std: "docker" "inspect" "cb9ed70d980748ea608a7fcf6fdb7d0657806781b49b3fdeafce1162d1b67ac3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cb9ed70d980748ea608a7fcf6fdb7d0657806781b49b3fdeafce1162d1b67ac3", kill_on_drop: false }`
[INFO] [stdout] cb9ed70d980748ea608a7fcf6fdb7d0657806781b49b3fdeafce1162d1b67ac3
