[INFO] fetching crate mscore 0.3.3... [INFO] testing mscore-0.3.3 against try#d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6 for pr-146237 [INFO] extracting crate mscore 0.3.3 into /workspace/builds/worker-5-tc2/source [INFO] started tweaking crates.io crate mscore 0.3.3 [INFO] finished tweaking crates.io crate mscore 0.3.3 [INFO] tweaked toml for crates.io crate mscore 0.3.3 written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate mscore 0.3.3 on toolchain d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate mscore 0.3.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 61a40ec890acebfce8921cf56e757ac457ece5b5134b55231eab689322b2cdcc [INFO] running `Command { std: "docker" "start" "-a" "61a40ec890acebfce8921cf56e757ac457ece5b5134b55231eab689322b2cdcc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "61a40ec890acebfce8921cf56e757ac457ece5b5134b55231eab689322b2cdcc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61a40ec890acebfce8921cf56e757ac457ece5b5134b55231eab689322b2cdcc", kill_on_drop: false }` [INFO] [stdout] 61a40ec890acebfce8921cf56e757ac457ece5b5134b55231eab689322b2cdcc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 12d402b21bb635054dfcac080009ec0b1407470bd6b2d25bb91e2fa12e0b6a3c [INFO] running `Command { std: "docker" "start" "-a" "12d402b21bb635054dfcac080009ec0b1407470bd6b2d25bb91e2fa12e0b6a3c", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling libc v0.2.172 [INFO] [stderr] Compiling bytemuck v1.23.0 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling virtue v0.0.18 [INFO] [stderr] Compiling unty v0.0.4 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling bincode_derive v2.0.1 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling bincode v2.0.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling ordered-float v4.6.0 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling simba v0.9.0 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling mscore v0.3.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 23.30s [INFO] running `Command { std: "docker" "inspect" "12d402b21bb635054dfcac080009ec0b1407470bd6b2d25bb91e2fa12e0b6a3c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "12d402b21bb635054dfcac080009ec0b1407470bd6b2d25bb91e2fa12e0b6a3c", kill_on_drop: false }` [INFO] [stdout] 12d402b21bb635054dfcac080009ec0b1407470bd6b2d25bb91e2fa12e0b6a3c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7a6c748125ded6954462fa4ddcce46e538a45c4593631e9ec099a61edcfeca20 [INFO] running `Command { std: "docker" "start" "-a" "7a6c748125ded6954462fa4ddcce46e538a45c4593631e9ec099a61edcfeca20", kill_on_drop: false }` [INFO] [stderr] Compiling mscore v0.3.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.39s [INFO] running `Command { std: "docker" "inspect" "7a6c748125ded6954462fa4ddcce46e538a45c4593631e9ec099a61edcfeca20", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7a6c748125ded6954462fa4ddcce46e538a45c4593631e9ec099a61edcfeca20", kill_on_drop: false }` [INFO] [stdout] 7a6c748125ded6954462fa4ddcce46e538a45c4593631e9ec099a61edcfeca20 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 580df56d65a8af1d4183ff364eaca1477d0b16af213f25653686f80f32b82bae [INFO] running `Command { std: "docker" "start" "-a" "580df56d65a8af1d4183ff364eaca1477d0b16af213f25653686f80f32b82bae", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mscore-162e453895c28584) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test algorithm::utility::tests::test_calculate_frame_abundance_gaussian ... ok [INFO] [stdout] test algorithm::utility::tests::test_calculate_frame_occurrence_gaussian ... ok [INFO] [stdout] test algorithm::utility::tests::test_calculate_bounds_gaussian ... ok [INFO] [stdout] test algorithm::utility::tests::test_parallel_functions ... ok [INFO] [stdout] test algorithm::utility::tests::test_normal_cdf_range ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/mscore-9fc6b3d8f9f67730) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests mscore [INFO] [stdout] [INFO] [stdout] running 52 tests [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::convolve (line 30) ... ok [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::get_num_protonizable_sites (line 311) ... FAILED [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::calculate_product_ion_mz (line 138) ... FAILED [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::calculate_peptide_mono_isotopic_mass (line 27) ... FAILED [INFO] [stdout] test src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acid_composition (line 104) ... FAILED [INFO] [stdout] test src/chemistry/elements.rs - chemistry::elements::atomic_weights_mono_isotopic (line 15) ... ok [INFO] [stdout] test src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acids (line 15) ... FAILED [INFO] [stdout] test src/chemistry/elements.rs - chemistry::elements::atoms_isotopic_weights (line 157) ... ok [INFO] [stdout] test src/chemistry/elements.rs - chemistry::elements::isotopic_abundance (line 215) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::lam (line 323) ... ok [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::simulate_charge_state_for_sequence (line 343) ... ok [INFO] [stdout] test src/chemistry/formulas.rs - chemistry::formulas::calculate_mz (line 90) ... ok [INFO] [stdout] test src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acid_masses (line 60) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::generate_isotope_pattern (line 404) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::normal_pdf (line 256) ... ok [INFO] [stdout] test src/algorithm/utility.rs - algorithm::utility::calculate_scan_occurrence_gaussian (line 317) ... ok [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::calculate_peptide_product_ion_mono_isotopic_mass (line 85) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::generate_averagine_spectrum (line 450) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::factorial (line 279) ... ok [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::simulate_charge_states_for_sequences (line 381) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::generate_isotope_distribution (line 148) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::convolve_pow (line 96) ... ok [INFO] [stdout] test src/algorithm/peptide.rs - algorithm::peptide::calculate_amino_acid_composition (line 163) ... ok [INFO] [stdout] test src/algorithm/isotope.rs - algorithm::isotope::generate_averagine_spectra (line 514) ... ok [INFO] [stdout] test src/chemistry/formulas.rs - chemistry::formulas::one_over_reduced_mobility_to_ccs (line 20) ... ok [INFO] [stdout] test src/chemistry/unimod.rs - chemistry::unimod::unimod_modifications_mass (line 57) ... ok [INFO] [stdout] test src/chemistry/formulas.rs - chemistry::formulas::ccs_to_one_over_reduced_mobility (line 58) ... ok [INFO] [stdout] test src/chemistry/unimod.rs - chemistry::unimod::unimod_modifications_mass_numerical (line 1108) ... ok [INFO] [stdout] test src/chemistry/unimod.rs - chemistry::unimod::modification_atomic_composition (line 15) ... ok [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::MzSpectrum::new (line 103) ... FAILED [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::MzSpectrum::to_resolution (line 313) ... FAILED [INFO] [stdout] test src/chemistry/utility.rs - chemistry::utility::unimod_sequence_to_tokens (line 17) ... FAILED [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::IndexedMzSpectrum::to_resolution (line 508) ... FAILED [INFO] [stdout] test src/timstof/quadrupole.rs - timstof::quadrupole::ion_transition_function_midpoint (line 82) ... FAILED [INFO] [stdout] test src/timstof/quadrupole.rs - timstof::quadrupole::smooth_step (line 24) ... ok [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::IndexedMzSpectrum::vectorized (line 551) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::TimsFrame (line 710) ... ok [INFO] [stdout] test src/timstof/quadrupole.rs - timstof::quadrupole::smooth_step_up_down (line 54) ... ok [INFO] [stdout] test src/timstof/slice.rs - timstof::slice::TimsSlice::new (line 31) ... ok [INFO] [stdout] test src/timstof/slice.rs - timstof::slice::TimsSlice::filter_ranged (line 58) ... ok [INFO] [stdout] test src/timstof/spectrum.rs - timstof::spectrum::TimsSpectrum::new (line 39) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::TimsFrame::filter_ranged (line 223) ... ok [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::MzSpectrum::add (line 383) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::TimsFrame::to_tims_spectra (line 173) ... ok [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::IndexedMzSpectrum::new (line 490) ... ok [INFO] [stdout] test src/timstof/quadrupole.rs - timstof::quadrupole::apply_transmission (line 120) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::TimsFrame::new (line 143) ... ok [INFO] [stdout] test src/chemistry/utility.rs - chemistry::utility::find_unimod_patterns (line 83) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::TimsFrame::get_ims_frame (line 159) ... ok [INFO] [stdout] test src/chemistry/utility.rs - chemistry::utility::reshape_prosit_array (line 154) ... ok [INFO] [stdout] test src/data/spectrum.rs - data::spectrum::MzSpectrum::to_windows (line 150) ... ok [INFO] [stdout] test src/timstof/frame.rs - timstof::frame::ImsFrame::new (line 81) ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/algorithm/peptide.rs - algorithm::peptide::get_num_protonizable_sites (line 311) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcTYyi6s/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcTYyi6s/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestekRHDw/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/algorithm/peptide.rs - algorithm::peptide::calculate_product_ion_mz (line 138) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcx4fCb0/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcx4fCb0/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctesth0Zh53/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/algorithm/peptide.rs - algorithm::peptide::calculate_peptide_mono_isotopic_mass (line 27) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcR9GaJO/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcR9GaJO/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestggsOiF/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acid_composition (line 104) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcQtpSqn/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcQtpSqn/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestZ7TOSX/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acids (line 15) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcJXZJ03/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcJXZJ03/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest2v09XD/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/data/spectrum.rs - data::spectrum::MzSpectrum::new (line 103) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcYFBF52/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcYFBF52/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestWXoWXM/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/data/spectrum.rs - data::spectrum::MzSpectrum::to_resolution (line 313) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcZPJ9Jl/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcZPJ9Jl/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestRQLM2I/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/chemistry/utility.rs - chemistry::utility::unimod_sequence_to_tokens (line 17) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcwlt75p/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcwlt75p/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestzTCtNT/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/data/spectrum.rs - data::spectrum::IndexedMzSpectrum::to_resolution (line 508) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcBrR6hd/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcBrR6hd/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest234erJ/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/timstof/quadrupole.rs - timstof::quadrupole::ion_transition_function_midpoint (line 82) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcwOj3m2/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libmscore-88ebfc6238483708,libordered_float-5714a82c156b4ba7,librayon-8c9c043f71b8b9db,librayon_core-eae9644c310958e7,libcrossbeam_deque-ce08bd9aba37d973,libcrossbeam_epoch-0e344cb0f6dc787c,libcrossbeam_utils-57acb8582d3ed5fe,libregex-ed00a127b8e728c6,libregex_automata-33e717a2ce96fbe4,libaho_corasick-50150a17a2667fa6,libmemchr-4f0714dc45d95749,libregex_syntax-13fc688ae7f36982,libitertools-3db4797dc23645d3,libeither-ef22a4c75605e12f,libserde-fb2c1ea06f6febc7,libbincode-eaa6e1479e74a378,libunty-4b879f2d92d382d8,libstatrs-3c0ec3d9e9b9e05b,libnalgebra-5cee60dff9ce9b06,librand_distr-828bce562021dc0e,libmatrixmultiply-08319ad34dda5eb2,librawpointer-a726d041f28ef5ec,libnum_rational-3cff920f2c992de1,libnum_integer-07a98833ae263426,libtypenum-b636c2b461885073,libsimba-cb37391e34d2126a,libwide-0146ca295d030193,libsafe_arch-65312329a6e10ff5,libbytemuck-dc2992fa724ecebd,libnum_complex-95a2925e76cb71dc,libapprox-0be49c1c43329a4f,libnum_traits-3e9a3b85b0f00cdd,librand-981fc25e59e6dde0,librand_chacha-9c6269f8da63cc8e,libppv_lite86-f1e37e57ffef6e8c,libzerocopy-11ad661e9e1ff602,librand_core-99913eebf42179ce,libgetrandom-fde0f96e19ac7f15,liblibc-9098e8a05e8dc2a2,libcfg_if-33ef6c02a07f9fec}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lc" "-lm" "-lrt" "-lpthread" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/tmp/rustcwOj3m2/raw-dylibs" "-B/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest8tJf2q/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/algorithm/peptide.rs - algorithm::peptide::calculate_peptide_mono_isotopic_mass (line 27) [INFO] [stdout] src/algorithm/peptide.rs - algorithm::peptide::calculate_product_ion_mz (line 138) [INFO] [stdout] src/algorithm/peptide.rs - algorithm::peptide::get_num_protonizable_sites (line 311) [INFO] [stdout] src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acid_composition (line 104) [INFO] [stdout] src/chemistry/amino_acid.rs - chemistry::amino_acid::amino_acids (line 15) [INFO] [stdout] src/chemistry/utility.rs - chemistry::utility::unimod_sequence_to_tokens (line 17) [INFO] [stdout] src/data/spectrum.rs - data::spectrum::IndexedMzSpectrum::to_resolution (line 508) [INFO] [stdout] src/data/spectrum.rs - data::spectrum::MzSpectrum::new (line 103) [INFO] [stdout] src/data/spectrum.rs - data::spectrum::MzSpectrum::to_resolution (line 313) [INFO] [stdout] src/timstof/quadrupole.rs - timstof::quadrupole::ion_transition_function_midpoint (line 82) [INFO] [stdout] [INFO] [stdout] test result: FAILED. 42 passed; 10 failed; 0 ignored; 0 measured; 0 filtered out; finished in 23.46s [INFO] [stdout] [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] running `Command { std: "docker" "inspect" "580df56d65a8af1d4183ff364eaca1477d0b16af213f25653686f80f32b82bae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "580df56d65a8af1d4183ff364eaca1477d0b16af213f25653686f80f32b82bae", kill_on_drop: false }` [INFO] [stdout] 580df56d65a8af1d4183ff364eaca1477d0b16af213f25653686f80f32b82bae