[INFO] cloning repository https://github.com/arudhir/transdecoder-rust [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/arudhir/transdecoder-rust" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] b28e658d5c04de63c753d7d8b2a94f413557ecd7 [INFO] testing arudhir/transdecoder-rust against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Farudhir%2Ftransdecoder-rust" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/arudhir/transdecoder-rust [INFO] finished tweaking git repo https://github.com/arudhir/transdecoder-rust [INFO] tweaked toml for git repo https://github.com/arudhir/transdecoder-rust written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/arudhir/transdecoder-rust on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/arudhir/transdecoder-rust already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded wide v0.7.32 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d5e37a32294fe468c5ad22a8bc12d29d78097ce7dc09cbddbf1da2d62cd6c8fd [INFO] running `Command { std: "docker" "start" "-a" "d5e37a32294fe468c5ad22a8bc12d29d78097ce7dc09cbddbf1da2d62cd6c8fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d5e37a32294fe468c5ad22a8bc12d29d78097ce7dc09cbddbf1da2d62cd6c8fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d5e37a32294fe468c5ad22a8bc12d29d78097ce7dc09cbddbf1da2d62cd6c8fd", kill_on_drop: false }` [INFO] [stdout] d5e37a32294fe468c5ad22a8bc12d29d78097ce7dc09cbddbf1da2d62cd6c8fd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3bc1b8d3bb76781fd5dceaa0090218540f79a2dc528f75886acd4420b0cfcfe3 [INFO] running `Command { std: "docker" "start" "-a" "3bc1b8d3bb76781fd5dceaa0090218540f79a2dc528f75886acd4420b0cfcfe3", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling libc v0.2.171 [INFO] [stderr] Compiling zerocopy v0.8.24 [INFO] [stderr] Compiling bytemuck v1.22.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Compiling hashbrown v0.15.2 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling transdecoder-rust v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `seq` [INFO] [stdout] --> src/orf.rs:44:18 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_seq` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `strand` [INFO] [stdout] --> src/orf.rs:44:29 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_strand` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/orf.rs:45:9 [INFO] [stdout] | [INFO] [stdout] 45 | let mut orfs = Vec::new(); // A dynamic vector of ORFs as an accumulator, like orfs = [] in [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `orf` [INFO] [stdout] --> src/orf.rs:92:17 [INFO] [stdout] | [INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_orf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum `Strand` is never used [INFO] [stdout] --> src/types.rs:2:10 [INFO] [stdout] | [INFO] [stdout] 2 | pub enum Strand { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum `ORFType` is never used [INFO] [stdout] --> src/types.rs:9:10 [INFO] [stdout] | [INFO] [stdout] 9 | pub enum ORFType { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ORF` is never constructed [INFO] [stdout] --> src/types.rs:17:12 [INFO] [stdout] | [INFO] [stdout] 17 | pub struct ORF { [INFO] [stdout] | ^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `make_codon_table` is never used [INFO] [stdout] --> src/orf.rs:4:8 [INFO] [stdout] | [INFO] [stdout] 4 | pub fn make_codon_table() -> HashMap<&'static str, char> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `find_orfs` is never used [INFO] [stdout] --> src/orf.rs:44:8 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `is_start` is never used [INFO] [stdout] --> src/orf.rs:65:4 [INFO] [stdout] | [INFO] [stdout] 65 | fn is_start(seq: &str) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `is_stop` is never used [INFO] [stdout] --> src/orf.rs:70:4 [INFO] [stdout] | [INFO] [stdout] 70 | fn is_stop(seq: &str) -> bool { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `translate` is never used [INFO] [stdout] --> src/orf.rs:75:4 [INFO] [stdout] | [INFO] [stdout] 75 | fn translate(seq: &str) -> String { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `classify_orf` is never used [INFO] [stdout] --> src/orf.rs:92:4 [INFO] [stdout] | [INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `reverse_complement` is never used [INFO] [stdout] --> src/orf.rs:97:4 [INFO] [stdout] | [INFO] [stdout] 97 | fn reverse_complement(seq: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 46.38s [INFO] running `Command { std: "docker" "inspect" "3bc1b8d3bb76781fd5dceaa0090218540f79a2dc528f75886acd4420b0cfcfe3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3bc1b8d3bb76781fd5dceaa0090218540f79a2dc528f75886acd4420b0cfcfe3", kill_on_drop: false }` [INFO] [stdout] 3bc1b8d3bb76781fd5dceaa0090218540f79a2dc528f75886acd4420b0cfcfe3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9e9110b473b1a8aac3c8743bfc4de7bdaeb029917790dfc073be19b216c68731 [INFO] running `Command { std: "docker" "start" "-a" "9e9110b473b1a8aac3c8743bfc4de7bdaeb029917790dfc073be19b216c68731", kill_on_drop: false }` [INFO] [stderr] Compiling transdecoder-rust v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `seq` [INFO] [stdout] --> src/orf.rs:44:18 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_seq` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `strand` [INFO] [stdout] --> src/orf.rs:44:29 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_strand` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/orf.rs:45:9 [INFO] [stdout] | [INFO] [stdout] 45 | let mut orfs = Vec::new(); // A dynamic vector of ORFs as an accumulator, like orfs = [] in [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `orf` [INFO] [stdout] --> src/orf.rs:92:17 [INFO] [stdout] | [INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_orf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `find_orfs` is never used [INFO] [stdout] --> src/orf.rs:44:8 [INFO] [stdout] | [INFO] [stdout] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `classify_orf` is never used [INFO] [stdout] --> src/orf.rs:92:4 [INFO] [stdout] | [INFO] [stdout] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.57s [INFO] running `Command { std: "docker" "inspect" "9e9110b473b1a8aac3c8743bfc4de7bdaeb029917790dfc073be19b216c68731", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9e9110b473b1a8aac3c8743bfc4de7bdaeb029917790dfc073be19b216c68731", kill_on_drop: false }` [INFO] [stdout] 9e9110b473b1a8aac3c8743bfc4de7bdaeb029917790dfc073be19b216c68731 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 29ec8b2b2f7e2eda1c15cc7ffc8a74e32da1f8e1fd1fada298c95b9e73e1beb2 [INFO] running `Command { std: "docker" "start" "-a" "29ec8b2b2f7e2eda1c15cc7ffc8a74e32da1f8e1fd1fada298c95b9e73e1beb2", kill_on_drop: false }` [INFO] [stderr] warning: unused variable: `seq` [INFO] [stderr] --> src/orf.rs:44:18 [INFO] [stderr] | [INFO] [stderr] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_seq` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `strand` [INFO] [stderr] --> src/orf.rs:44:29 [INFO] [stderr] | [INFO] [stderr] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stderr] | ^^^^^^ help: if this is intentional, prefix it with an underscore: `_strand` [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/orf.rs:45:9 [INFO] [stderr] | [INFO] [stderr] 45 | let mut orfs = Vec::new(); // A dynamic vector of ORFs as an accumulator, like orfs = [] in [INFO] [stderr] | ----^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `orf` [INFO] [stderr] --> src/orf.rs:92:17 [INFO] [stderr] | [INFO] [stderr] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_orf` [INFO] [stderr] [INFO] [stderr] warning: function `find_orfs` is never used [INFO] [stderr] --> src/orf.rs:44:8 [INFO] [stderr] | [INFO] [stderr] 44 | pub fn find_orfs(seq: &str, strand: Strand) -> Vec { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: function `classify_orf` is never used [INFO] [stderr] --> src/orf.rs:92:4 [INFO] [stderr] | [INFO] [stderr] 92 | fn classify_orf(orf: &str) -> ORFType { [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `transdecoder-rust` (bin "transdecoder-rust" test) generated 6 warnings (run `cargo fix --bin "transdecoder-rust" --tests` to apply 1 suggestion) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/transdecoder_rust-324cc838cc7f4d6c) [INFO] [stdout] [INFO] [stdout] running 16 tests [INFO] [stdout] test orf::tests::test_is_start ... ok [INFO] [stdout] test orf::tests::test_is_stop ... ok [INFO] [stdout] test orf::tests::test_is_stop_false ... ok [INFO] [stdout] test orf::tests::test_reverse_complement ... ok [INFO] [stdout] test orf::tests::test_is_start_false ... ok [INFO] [stdout] test orf::tests::test_translate_non_multiple_3 ... ok [INFO] [stdout] test orf::tests::test_translate_intermediate ... ok [INFO] [stdout] test orf::tests::test_translate_basic ... ok [INFO] [stdout] test types::tests::test_orf_construction ... ok [INFO] [stdout] test types::tests::test_orftype_3prime_partial ... ok [INFO] [stdout] test types::tests::test_orftype_complete ... ok [INFO] [stdout] test types::tests::test_orftype_internal ... ok [INFO] [stdout] test types::tests::test_orftype_5prime_partial ... ok [INFO] [stdout] test types::tests::test_strand_minus ... ok [INFO] [stdout] test types::tests::test_strand_plus ... ok [INFO] [stdout] test types::tests::test_strand_unknown ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 16 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "29ec8b2b2f7e2eda1c15cc7ffc8a74e32da1f8e1fd1fada298c95b9e73e1beb2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "29ec8b2b2f7e2eda1c15cc7ffc8a74e32da1f8e1fd1fada298c95b9e73e1beb2", kill_on_drop: false }` [INFO] [stdout] 29ec8b2b2f7e2eda1c15cc7ffc8a74e32da1f8e1fd1fada298c95b9e73e1beb2