[INFO] cloning repository https://github.com/anderspitman/samslice-htslib [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/anderspitman/samslice-htslib" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanderspitman%2Fsamslice-htslib", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanderspitman%2Fsamslice-htslib'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 53cf0c4dddfd1555c724bb58bb75c747e73e67d1 [INFO] testing anderspitman/samslice-htslib against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fanderspitman%2Fsamslice-htslib" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/anderspitman/samslice-htslib [INFO] finished tweaking git repo https://github.com/anderspitman/samslice-htslib [INFO] tweaked toml for git repo https://github.com/anderspitman/samslice-htslib written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/anderspitman/samslice-htslib on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/anderspitman/samslice-htslib already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded tinyvec v1.8.0 [INFO] [stderr] Downloaded proc-macro2 v1.0.86 [INFO] [stderr] Downloaded thiserror-impl v1.0.62 [INFO] [stderr] Downloaded thiserror v1.0.62 [INFO] [stderr] Downloaded rustversion v1.0.17 [INFO] [stderr] Downloaded derive-new v0.5.9 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded clang-sys v1.8.1 [INFO] [stderr] Downloaded libloading v0.8.4 [INFO] [stderr] Downloaded bitflags v2.6.0 [INFO] [stderr] Downloaded cc v1.1.1 [INFO] [stderr] Downloaded openssl-sys v0.9.102 [INFO] [stderr] Downloaded rust-htslib v0.47.0 [INFO] [stderr] Downloaded jobserver v0.1.31 [INFO] [stderr] Downloaded libdeflate-sys v0.7.5 [INFO] [stderr] Downloaded regex v1.10.5 [INFO] [stderr] Downloaded syn v2.0.71 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded bindgen v0.69.4 [INFO] [stderr] Downloaded regex-syntax v0.8.4 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded cexpr v0.6.0 [INFO] [stderr] Downloaded cmake v0.1.50 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded url v2.5.2 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded regex-automata v0.4.7 [INFO] [stderr] Downloaded bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Downloaded libz-sys v1.1.18 [INFO] [stderr] Downloaded lzma-sys v0.1.20 [INFO] [stderr] Downloaded libc v0.2.155 [INFO] [stderr] Downloaded curl-sys v0.4.73+curl-8.8.0 [INFO] [stderr] Downloaded hts-sys v2.1.4 [INFO] [stderr] Downloaded bio-types v1.0.2 [INFO] [stderr] Downloaded openssl-src v300.3.1+3.3.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1be19c820a4562c6ae3a03039de0f15de05000466691b33c18a79382b6733e76 [INFO] running `Command { std: "docker" "start" "-a" "1be19c820a4562c6ae3a03039de0f15de05000466691b33c18a79382b6733e76", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1be19c820a4562c6ae3a03039de0f15de05000466691b33c18a79382b6733e76", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1be19c820a4562c6ae3a03039de0f15de05000466691b33c18a79382b6733e76", kill_on_drop: false }` [INFO] [stdout] 1be19c820a4562c6ae3a03039de0f15de05000466691b33c18a79382b6733e76 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 388af1eec1ec8a74431d989e304823fcdf6369aad2fe55dc71fa0a80f20552fa [INFO] running `Command { std: "docker" "start" "-a" "388af1eec1ec8a74431d989e304823fcdf6369aad2fe55dc71fa0a80f20552fa", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling pkg-config v0.3.30 [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling bindgen v0.69.4 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling libloading v0.8.4 [INFO] [stderr] Compiling tinyvec_macros v0.1.1 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling tinyvec v1.8.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.62 [INFO] [stderr] Compiling percent-encoding v2.3.1 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling unicode-bidi v0.3.15 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling form_urlencoded v1.2.1 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling syn v2.0.71 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling unicode-normalization v0.1.23 [INFO] [stderr] Compiling jobserver v0.1.31 [INFO] [stderr] Compiling cc v1.1.1 [INFO] [stderr] Compiling idna v0.5.0 [INFO] [stderr] Compiling url v2.5.2 [INFO] [stderr] Compiling openssl-src v300.3.1+3.3.1 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling openssl-sys v0.9.102 [INFO] [stderr] Compiling libz-sys v1.1.18 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling libdeflate-sys v0.7.5 [INFO] [stderr] Compiling curl-sys v0.4.73+curl-8.8.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling regex v1.10.5 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling thiserror-impl v1.0.62 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling bio-types v1.0.2 [INFO] [stderr] Compiling hts-sys v2.1.4 [INFO] [stderr] Compiling rust-htslib v0.47.0 [INFO] [stderr] Compiling samslice-htslib v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 24s [INFO] running `Command { std: "docker" "inspect" "388af1eec1ec8a74431d989e304823fcdf6369aad2fe55dc71fa0a80f20552fa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "388af1eec1ec8a74431d989e304823fcdf6369aad2fe55dc71fa0a80f20552fa", kill_on_drop: false }` [INFO] [stdout] 388af1eec1ec8a74431d989e304823fcdf6369aad2fe55dc71fa0a80f20552fa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 43ea501963e8305ba707757999df14955d1e70268e206d4fcb09a26f6f6dbec2 [INFO] running `Command { std: "docker" "start" "-a" "43ea501963e8305ba707757999df14955d1e70268e206d4fcb09a26f6f6dbec2", kill_on_drop: false }` [INFO] [stderr] Compiling samslice-htslib v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.68s [INFO] running `Command { std: "docker" "inspect" "43ea501963e8305ba707757999df14955d1e70268e206d4fcb09a26f6f6dbec2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "43ea501963e8305ba707757999df14955d1e70268e206d4fcb09a26f6f6dbec2", kill_on_drop: false }` [INFO] [stdout] 43ea501963e8305ba707757999df14955d1e70268e206d4fcb09a26f6f6dbec2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e467418d724d052cd55a1f020d89a662dc4c23e429beea942012cc56df6dccb1 [INFO] running `Command { std: "docker" "start" "-a" "e467418d724d052cd55a1f020d89a662dc4c23e429beea942012cc56df6dccb1", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/samslice_htslib-044b55648ede5095) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e467418d724d052cd55a1f020d89a662dc4c23e429beea942012cc56df6dccb1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e467418d724d052cd55a1f020d89a662dc4c23e429beea942012cc56df6dccb1", kill_on_drop: false }` [INFO] [stdout] e467418d724d052cd55a1f020d89a662dc4c23e429beea942012cc56df6dccb1