[INFO] fetching crate vdj_ann 0.4.4... [INFO] building vdj_ann-0.4.4 against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2 [INFO] extracting crate vdj_ann 0.4.4 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate vdj_ann 0.4.4 [INFO] finished tweaking crates.io crate vdj_ann 0.4.4 [INFO] tweaked toml for crates.io crate vdj_ann 0.4.4 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate vdj_ann 0.4.4 on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 75 packages to latest compatible versions [INFO] [stderr] Adding itertools v0.11.0 (available: v0.14.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded superslice v1.0.0 [INFO] [stderr] Downloaded vector_utils v0.1.5 [INFO] [stderr] Downloaded string_utils v0.1.4 [INFO] [stderr] Downloaded permutation v0.2.5 [INFO] [stderr] Downloaded debruijn v0.3.4 [INFO] [stderr] Downloaded boomphf v0.5.9 [INFO] [stderr] Downloaded amino v0.1.7 [INFO] [stderr] Downloaded align_tools v0.1.12 [INFO] [stderr] Downloaded bio-types v0.12.1 [INFO] [stderr] Downloaded io_utils v0.3.2 [INFO] [stderr] Downloaded strum_macros v0.23.1 [INFO] [stderr] Downloaded wyhash v0.5.0 [INFO] [stderr] Downloaded stats_utils v0.1.3 [INFO] [stderr] Downloaded vdj_types v0.2.0 [INFO] [stderr] Downloaded kmer_lookup v0.1.5 [INFO] [stderr] Downloaded equiv v0.1.3 [INFO] [stderr] Downloaded graph_simple v0.1.5 [INFO] [stderr] Downloaded bio_edit v0.1.1 [INFO] [stderr] Downloaded hyperbase v0.1.8 [INFO] [stderr] Downloaded fasta_tools v0.1.8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 04007d1555a4263cf9a114c2eba29e31188b55ba938e017113082823fffa4fa4 [INFO] running `Command { std: "docker" "start" "-a" "04007d1555a4263cf9a114c2eba29e31188b55ba938e017113082823fffa4fa4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "04007d1555a4263cf9a114c2eba29e31188b55ba938e017113082823fffa4fa4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "04007d1555a4263cf9a114c2eba29e31188b55ba938e017113082823fffa4fa4", kill_on_drop: false }` [INFO] [stdout] 04007d1555a4263cf9a114c2eba29e31188b55ba938e017113082823fffa4fa4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8146f6d5c07ffc0505eea0a3870fbf6c12cecaa78ec81ef14e736f75ff7ba945 [INFO] running `Command { std: "docker" "start" "-a" "8146f6d5c07ffc0505eea0a3870fbf6c12cecaa78ec81ef14e736f75ff7ba945", kill_on_drop: false }` [INFO] [stderr] Compiling permutation v0.2.5 [INFO] [stderr] Compiling superslice v1.0.0 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling lz4-sys v1.11.1+lz4-1.10.0 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling strum_macros v0.23.1 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling equiv v0.1.3 [INFO] [stderr] Compiling stats_utils v0.1.3 [INFO] [stderr] Compiling vector_utils v0.1.5 [INFO] [stderr] Compiling wyhash v0.5.0 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling string_utils v0.1.4 [INFO] [stderr] Compiling graph_simple v0.1.5 [INFO] [stderr] Compiling bio-types v0.12.1 [INFO] [stderr] Compiling bio_edit v0.1.1 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling boomphf v0.5.9 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling vdj_types v0.2.0 [INFO] [stderr] Compiling debruijn v0.3.4 [INFO] [stderr] Compiling kmer_lookup v0.1.5 [INFO] [stderr] Compiling align_tools v0.1.12 [INFO] [stderr] Compiling amino v0.1.7 [INFO] [stderr] Compiling hyperbase v0.1.8 [INFO] [stderr] Compiling lz4 v1.28.1 [INFO] [stderr] Compiling io_utils v0.3.2 [INFO] [stderr] Compiling fasta_tools v0.1.8 [INFO] [stderr] Compiling vdj_ann v0.4.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 21.51s [INFO] running `Command { std: "docker" "inspect" "8146f6d5c07ffc0505eea0a3870fbf6c12cecaa78ec81ef14e736f75ff7ba945", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8146f6d5c07ffc0505eea0a3870fbf6c12cecaa78ec81ef14e736f75ff7ba945", kill_on_drop: false }` [INFO] [stdout] 8146f6d5c07ffc0505eea0a3870fbf6c12cecaa78ec81ef14e736f75ff7ba945 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 81d0b9467bc594b5f0229e6f045bfe06f911160a6f328184203d5b4e386d21fe [INFO] running `Command { std: "docker" "start" "-a" "81d0b9467bc594b5f0229e6f045bfe06f911160a6f328184203d5b4e386d21fe", kill_on_drop: false }` [INFO] [stderr] Compiling vdj_ann v0.4.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.35s [INFO] running `Command { std: "docker" "inspect" "81d0b9467bc594b5f0229e6f045bfe06f911160a6f328184203d5b4e386d21fe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "81d0b9467bc594b5f0229e6f045bfe06f911160a6f328184203d5b4e386d21fe", kill_on_drop: false }` [INFO] [stdout] 81d0b9467bc594b5f0229e6f045bfe06f911160a6f328184203d5b4e386d21fe