[INFO] fetching crate oarfish 0.9.0... [INFO] building oarfish-0.9.0 against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2 [INFO] extracting crate oarfish 0.9.0 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate oarfish 0.9.0 [INFO] finished tweaking crates.io crate oarfish 0.9.0 [INFO] tweaked toml for crates.io crate oarfish 0.9.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate oarfish 0.9.0 on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate oarfish 0.9.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded testing_table v0.3.0 [INFO] [stderr] Downloaded seqcol_rs v0.4.1 [INFO] [stderr] Downloaded tabled_derive v0.11.0 [INFO] [stderr] Downloaded parse-size v1.1.0 [INFO] [stderr] Downloaded hash_hasher v2.0.4 [INFO] [stderr] Downloaded noodles-core v0.17.0 [INFO] [stderr] Downloaded papergrid v0.17.0 [INFO] [stderr] Downloaded bzip2 v0.5.2 [INFO] [stderr] Downloaded atomic_float v1.1.0 [INFO] [stderr] Downloaded noisy_float v0.2.0 [INFO] [stderr] Downloaded planus v0.3.1 [INFO] [stderr] Downloaded arrow-format v0.8.1 [INFO] [stderr] Downloaded parquet-format-safe v0.2.4 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded minimap2 v0.1.27+minimap2.2.30 [INFO] [stderr] Downloaded noodles-bam v0.81.0 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded tabled v0.20.0 [INFO] [stderr] Downloaded foreign_vec v0.1.0 [INFO] [stderr] Downloaded zstd v0.12.4 [INFO] [stderr] Downloaded ndarray-stats v0.6.0 [INFO] [stderr] Downloaded bgzip v0.3.1 [INFO] [stderr] Downloaded noodles-bgzf v0.41.0 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded lz4_flex v0.10.0 [INFO] [stderr] Downloaded minimap2-sys v0.1.23+minimap2.2.30 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded zstd-safe v6.0.6 [INFO] [stderr] Downloaded kders v0.1.1 [INFO] [stderr] Downloaded sendable-swapvec v0.4.3 [INFO] [stderr] Downloaded noodles-csi v0.49.0 [INFO] [stderr] Downloaded path-tools v0.1.0 [INFO] [stderr] Downloaded sprs v0.11.3 [INFO] [stderr] Downloaded niffler v3.0.0 [INFO] [stderr] Downloaded alga v0.9.3 [INFO] [stderr] Downloaded arrow2 v0.18.0 [INFO] [stderr] Downloaded parquet2 v0.17.2 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] [stderr] Downloaded noodles-sam v0.77.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2454e4c4da87cba3b37ef47b5de6a8d0f4018f714516da2453a573883b39bed2 [INFO] running `Command { std: "docker" "start" "-a" "2454e4c4da87cba3b37ef47b5de6a8d0f4018f714516da2453a573883b39bed2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2454e4c4da87cba3b37ef47b5de6a8d0f4018f714516da2453a573883b39bed2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2454e4c4da87cba3b37ef47b5de6a8d0f4018f714516da2453a573883b39bed2", kill_on_drop: false }` [INFO] [stdout] 2454e4c4da87cba3b37ef47b5de6a8d0f4018f714516da2453a573883b39bed2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f87754cd6e9042b60344129e2295259b6c88908430aa3df406d79d4024438e4a [INFO] running `Command { std: "docker" "start" "-a" "f87754cd6e9042b60344129e2295259b6c88908430aa3df406d79d4024438e4a", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.104 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling hashbrown v0.15.4 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling slab v0.4.10 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling zstd-safe v6.0.6 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rustix v1.0.7 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling cc v1.2.27 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Compiling fallible-streaming-iterator v0.1.9 [INFO] [stderr] Compiling portable-atomic v1.11.1 [INFO] [stderr] Compiling array-init-cursor v0.2.1 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling streaming-decompression v0.1.2 [INFO] [stderr] Compiling planus v0.3.1 [INFO] [stderr] Compiling arrow2 v0.18.0 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling twox-hash v1.6.3 [INFO] [stderr] Compiling clap_builder v4.5.40 [INFO] [stderr] Compiling indexmap v2.10.0 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling noisy_float v0.2.0 [INFO] [stderr] Compiling lz4_flex v0.10.0 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling alga v0.9.3 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling chrono v0.4.41 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling papergrid v0.17.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling testing_table v0.3.0 [INFO] [stderr] Compiling zstd-sys v2.0.15+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling sha2-asm v0.6.4 [INFO] [stderr] Compiling lz4-sys v1.11.1+lz4-1.10.0 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling minimap2-sys v0.1.23+minimap2.2.30 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-core v0.17.0 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling bzip2 v0.5.2 [INFO] [stderr] Compiling sha2 v0.10.9 [INFO] [stderr] Compiling tempfile v3.20.0 [INFO] [stderr] Compiling noodles-bgzf v0.41.0 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling crossbeam-queue v0.3.12 [INFO] [stderr] Compiling num_cpus v1.17.0 [INFO] [stderr] Compiling dyn-clone v1.0.19 [INFO] [stderr] Compiling streaming-iterator v0.1.9 [INFO] [stderr] Compiling ethnum v1.5.2 [INFO] [stderr] Compiling noodles-csi v0.49.0 [INFO] [stderr] Compiling simdutf8 v0.1.5 [INFO] [stderr] Compiling hash_hasher v2.0.4 [INFO] [stderr] Compiling foreign_vec v0.1.0 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling num-format v0.4.4 [INFO] [stderr] Compiling crossbeam v0.8.4 [INFO] [stderr] Compiling noodles-sam v0.77.0 [INFO] [stderr] Compiling rand v0.9.1 [INFO] [stderr] Compiling proc-macro-error2 v2.0.1 [INFO] [stderr] Compiling ndarray-stats v0.6.0 [INFO] [stderr] Compiling sprs v0.11.3 [INFO] [stderr] Compiling atomic_float v1.1.0 [INFO] [stderr] Compiling parse-size v1.1.0 [INFO] [stderr] Compiling path-tools v0.1.0 [INFO] [stderr] Compiling rustc-hash v2.1.1 [INFO] [stderr] Compiling kders v0.1.1 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling bytemuck_derive v1.9.3 [INFO] [stderr] Compiling futures-macro v0.3.31 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling async-stream-impl v0.3.6 [INFO] [stderr] Compiling tracing-attributes v0.1.30 [INFO] [stderr] Compiling async-trait v0.1.88 [INFO] [stderr] Compiling async-stream v0.3.6 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling futures-util v0.3.31 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling tabled_derive v0.11.0 [INFO] [stderr] Compiling typed-builder-macro v0.21.0 [INFO] [stderr] Compiling bytemuck v1.23.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling clap_derive v4.5.40 [INFO] [stderr] Compiling tracing v0.1.41 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling tracing-subscriber v0.3.19 [INFO] [stderr] Compiling bgzip v0.3.1 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling noodles-bam v0.81.0 [INFO] [stderr] Compiling liblzma v0.3.6 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling tabled v0.20.0 [INFO] [stderr] Compiling typed-builder v0.21.0 [INFO] [stderr] Compiling clap v4.5.40 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling simba v0.9.0 [INFO] [stderr] Compiling futures-executor v0.3.31 [INFO] [stderr] Compiling futures v0.3.31 [INFO] [stderr] Compiling parquet-format-safe v0.2.4 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling zstd v0.12.4 [INFO] [stderr] Compiling niffler v3.0.0 [INFO] [stderr] Compiling needletail v0.6.3 [INFO] [stderr] Compiling minimap2 v0.1.27+minimap2.2.30 [INFO] [stderr] Compiling arrow-format v0.8.1 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling sendable-swapvec v0.4.3 [INFO] [stderr] Compiling seqcol_rs v0.4.1 [INFO] [stderr] Compiling parquet2 v0.17.2 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling lz4 v1.28.1 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling oarfish v0.9.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/util/oarfish_types.rs:135:17 [INFO] [stdout] | [INFO] [stdout] 135 | pub fn iter(&self) -> ReadChunkIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 135 | pub fn iter(&self) -> ReadChunkIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/util/oarfish_types.rs:705:17 [INFO] [stdout] | [INFO] [stdout] 705 | pub fn iter(&self) -> InMemoryAlignmentStoreIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | | [INFO] [stdout] | | the same lifetime is hidden here [INFO] [stdout] | | the same lifetime is hidden here [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 705 | pub fn iter(&self) -> InMemoryAlignmentStoreIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 31s [INFO] running `Command { std: "docker" "inspect" "f87754cd6e9042b60344129e2295259b6c88908430aa3df406d79d4024438e4a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f87754cd6e9042b60344129e2295259b6c88908430aa3df406d79d4024438e4a", kill_on_drop: false }` [INFO] [stdout] f87754cd6e9042b60344129e2295259b6c88908430aa3df406d79d4024438e4a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 72f89c6b62c7fdde8e768c93b127dc1d56506f8d0c7500b224c8728569b860cd [INFO] running `Command { std: "docker" "start" "-a" "72f89c6b62c7fdde8e768c93b127dc1d56506f8d0c7500b224c8728569b860cd", kill_on_drop: false }` [INFO] [stderr] Compiling oarfish v0.9.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/util/oarfish_types.rs:135:17 [INFO] [stdout] | [INFO] [stdout] 135 | pub fn iter(&self) -> ReadChunkIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 135 | pub fn iter(&self) -> ReadChunkIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/util/oarfish_types.rs:705:17 [INFO] [stdout] | [INFO] [stdout] 705 | pub fn iter(&self) -> InMemoryAlignmentStoreIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | | [INFO] [stdout] | | the same lifetime is hidden here [INFO] [stdout] | | the same lifetime is hidden here [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 705 | pub fn iter(&self) -> InMemoryAlignmentStoreIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.05s [INFO] running `Command { std: "docker" "inspect" "72f89c6b62c7fdde8e768c93b127dc1d56506f8d0c7500b224c8728569b860cd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "72f89c6b62c7fdde8e768c93b127dc1d56506f8d0c7500b224c8728569b860cd", kill_on_drop: false }` [INFO] [stdout] 72f89c6b62c7fdde8e768c93b127dc1d56506f8d0c7500b224c8728569b860cd