[INFO] fetching crate microbiorust-py 0.1.1...
[INFO] building microbiorust-py-0.1.1 against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2
[INFO] extracting crate microbiorust-py 0.1.1 into /workspace/builds/worker-1-tc1/source
[INFO] started tweaking crates.io crate microbiorust-py 0.1.1
[INFO] finished tweaking crates.io crate microbiorust-py 0.1.1
[INFO] tweaked toml for crates.io crate microbiorust-py 0.1.1 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate microbiorust-py 0.1.1 on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate microbiorust-py 0.1.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros v0.25.1
[INFO] [stderr]   Downloaded target-lexicon v0.13.2
[INFO] [stderr]   Downloaded pyo3-build-config v0.25.1
[INFO] [stderr]   Downloaded microBioRust v0.1.2
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded clap_derive v4.5.40
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded simba v0.9.0
[INFO] [stderr]   Downloaded protein-translate v0.2.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.25.1
[INFO] [stderr]   Downloaded unindent v0.2.4
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded bio v2.3.0
[INFO] [stderr]   Downloaded ndarray v0.16.1
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] [stderr]   Downloaded pyo3-ffi v0.25.1
[INFO] [stderr]   Downloaded pyo3 v0.25.1
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f3fba270e01d05f9a47ef158d997b01fff5aa71112a18d7ed9426f89e3e25ec7
[INFO] running `Command { std: "docker" "start" "-a" "f3fba270e01d05f9a47ef158d997b01fff5aa71112a18d7ed9426f89e3e25ec7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f3fba270e01d05f9a47ef158d997b01fff5aa71112a18d7ed9426f89e3e25ec7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f3fba270e01d05f9a47ef158d997b01fff5aa71112a18d7ed9426f89e3e25ec7", kill_on_drop: false }`
[INFO] [stdout] f3fba270e01d05f9a47ef158d997b01fff5aa71112a18d7ed9426f89e3e25ec7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 453a85a05ba20ab5c57c937a4b0ec8d7cdd99b2b28c7d0f66311c1c0f5f33f51
[INFO] running `Command { std: "docker" "start" "-a" "453a85a05ba20ab5c57c937a4b0ec8d7cdd99b2b28c7d0f66311c1c0f5f33f51", kill_on_drop: false }`
[INFO] [stderr]    Compiling target-lexicon v0.13.2
[INFO] [stderr]    Compiling bytemuck v1.23.1
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling indexmap v2.9.0
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling csv-core v0.1.12
[INFO] [stderr]    Compiling memoffset v0.9.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling clap_builder v4.5.40
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling csv v1.3.1
[INFO] [stderr]    Compiling itertools v0.14.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling multimap v0.10.1
[INFO] [stderr]    Compiling wide v0.7.33
[INFO] [stderr]    Compiling pyo3-build-config v0.25.1
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr]    Compiling petgraph v0.8.2
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling clap_derive v4.5.40
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling ordered-float v5.0.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling chrono v0.4.41
[INFO] [stderr]    Compiling unindent v0.2.4
[INFO] [stderr]    Compiling protein-translate v0.2.0
[INFO] [stderr]    Compiling thiserror v2.0.12
[INFO] [stderr]    Compiling pyo3-macros-backend v0.25.1
[INFO] [stderr]    Compiling pyo3-ffi v0.25.1
[INFO] [stderr]    Compiling pyo3 v0.25.1
[INFO] [stderr]    Compiling clap v4.5.40
[INFO] [stderr]    Compiling simba v0.9.0
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling pyo3-macros v0.25.1
[INFO] [stderr]    Compiling nalgebra v0.33.2
[INFO] [stderr]    Compiling statrs v0.18.0
[INFO] [stderr]    Compiling bio v2.3.0
[INFO] [stderr]    Compiling microBioRust v0.1.2
[INFO] [stderr]    Compiling microbiorust-py v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 43.82s
[INFO] running `Command { std: "docker" "inspect" "453a85a05ba20ab5c57c937a4b0ec8d7cdd99b2b28c7d0f66311c1c0f5f33f51", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "453a85a05ba20ab5c57c937a4b0ec8d7cdd99b2b28c7d0f66311c1c0f5f33f51", kill_on_drop: false }`
[INFO] [stdout] 453a85a05ba20ab5c57c937a4b0ec8d7cdd99b2b28c7d0f66311c1c0f5f33f51
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 99da87841b561033128c571aea4e54743138b4cf1831cb7a6bdf9d062c3a6d2f
[INFO] running `Command { std: "docker" "start" "-a" "99da87841b561033128c571aea4e54743138b4cf1831cb7a6bdf9d062c3a6d2f", kill_on_drop: false }`
[INFO] [stderr]    Compiling microbiorust-py v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.59s
[INFO] running `Command { std: "docker" "inspect" "99da87841b561033128c571aea4e54743138b4cf1831cb7a6bdf9d062c3a6d2f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "99da87841b561033128c571aea4e54743138b4cf1831cb7a6bdf9d062c3a6d2f", kill_on_drop: false }`
[INFO] [stdout] 99da87841b561033128c571aea4e54743138b4cf1831cb7a6bdf9d062c3a6d2f