[INFO] fetching crate hmmsearch_rs 0.1.0... [INFO] building hmmsearch_rs-0.1.0 against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2 [INFO] extracting crate hmmsearch_rs 0.1.0 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate hmmsearch_rs 0.1.0 [INFO] finished tweaking crates.io crate hmmsearch_rs 0.1.0 [INFO] tweaked toml for crates.io crate hmmsearch_rs 0.1.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate hmmsearch_rs 0.1.0 on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate hmmsearch_rs 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded hmmer-rs-2 v0.2.1 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded clap v4.5.16 [INFO] [stderr] Downloaded cc v1.1.14 [INFO] [stderr] Downloaded clap_builder v4.5.15 [INFO] [stderr] Downloaded syn v2.0.75 [INFO] [stderr] Downloaded flate2 v1.0.32 [INFO] [stderr] Downloaded libhmmer-sys-2 v0.1.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3b1fb3587cda0ae05d80eab483bbcb86329419d7be1c3aae93fd864017a98ccf [INFO] running `Command { std: "docker" "start" "-a" "3b1fb3587cda0ae05d80eab483bbcb86329419d7be1c3aae93fd864017a98ccf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3b1fb3587cda0ae05d80eab483bbcb86329419d7be1c3aae93fd864017a98ccf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3b1fb3587cda0ae05d80eab483bbcb86329419d7be1c3aae93fd864017a98ccf", kill_on_drop: false }` [INFO] [stdout] 3b1fb3587cda0ae05d80eab483bbcb86329419d7be1c3aae93fd864017a98ccf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7ea9ab60b055fdad21e9450137113bc0b7af4c92bd61dd63fdf913f5301df681 [INFO] running `Command { std: "docker" "start" "-a" "7ea9ab60b055fdad21e9450137113bc0b7af4c92bd61dd63fdf913f5301df681", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling cc v1.1.14 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Compiling prettyplease v0.2.20 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling bindgen v0.65.1 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling libloading v0.8.5 [INFO] [stderr] Compiling home v0.5.9 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling anstream v0.6.15 [INFO] [stderr] Compiling clap_lex v0.7.2 [INFO] [stderr] Compiling flate2 v1.0.32 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling iana-time-zone v0.1.60 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling clap_builder v4.5.15 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling chrono v0.4.38 [INFO] [stderr] Compiling syn v2.0.75 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling which v4.4.2 [INFO] [stderr] Compiling clap v4.5.16 [INFO] [stderr] Compiling regex v1.10.6 [INFO] [stderr] Compiling env_filter v0.1.2 [INFO] [stderr] Compiling env_logger v0.11.5 [INFO] [stderr] Compiling libhmmer-sys-2 v0.1.0 [INFO] [stderr] Compiling hmmer-rs-2 v0.2.1 [INFO] [stderr] Compiling hmmsearch_rs v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 36s [INFO] running `Command { std: "docker" "inspect" "7ea9ab60b055fdad21e9450137113bc0b7af4c92bd61dd63fdf913f5301df681", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7ea9ab60b055fdad21e9450137113bc0b7af4c92bd61dd63fdf913f5301df681", kill_on_drop: false }` [INFO] [stdout] 7ea9ab60b055fdad21e9450137113bc0b7af4c92bd61dd63fdf913f5301df681 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 733661f42c7d6abd46b76d79d0da844a6ecc66efb0b5cf4808757a59d47a8e4a [INFO] running `Command { std: "docker" "start" "-a" "733661f42c7d6abd46b76d79d0da844a6ecc66efb0b5cf4808757a59d47a8e4a", kill_on_drop: false }` [INFO] [stderr] Compiling hmmsearch_rs v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.49s [INFO] running `Command { std: "docker" "inspect" "733661f42c7d6abd46b76d79d0da844a6ecc66efb0b5cf4808757a59d47a8e4a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "733661f42c7d6abd46b76d79d0da844a6ecc66efb0b5cf4808757a59d47a8e4a", kill_on_drop: false }` [INFO] [stdout] 733661f42c7d6abd46b76d79d0da844a6ecc66efb0b5cf4808757a59d47a8e4a