[INFO] fetching crate exon-cram 0.32.4...
[INFO] building exon-cram-0.32.4 against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2
[INFO] extracting crate exon-cram 0.32.4 into /workspace/builds/worker-2-tc1/source
[INFO] started tweaking crates.io crate exon-cram 0.32.4
[INFO] finished tweaking crates.io crate exon-cram 0.32.4
[INFO] tweaked toml for crates.io crate exon-cram 0.32.4 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate exon-cram 0.32.4 on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 298 packages to latest compatible versions
[INFO] [stderr]       Adding arrow v53.4.1 (available: v56.2.0)
[INFO] [stderr]       Adding async-compression v0.4.19 (available: v0.4.32)
[INFO] [stderr]       Adding chrono v0.4.39 (available: v0.4.42)
[INFO] [stderr]       Adding noodles v0.86.0 (available: v0.101.0)
[INFO] [stderr]       Adding object_store v0.11.2 (available: v0.12.4)
[INFO] [stderr]       Adding zstd-safe v7.2.1 (available: v7.2.4)
[INFO] [stderr]       Adding zstd-sys v2.0.13+zstd.1.5.6 (available: v2.0.16+zstd.1.5.7)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.34.0
[INFO] [stderr]   Downloaded noodles-tabix v0.47.0
[INFO] [stderr]   Downloaded datafusion-functions-window-common v43.0.0
[INFO] [stderr]   Downloaded noodles-csi v0.41.0
[INFO] [stderr]   Downloaded datafusion-functions-nested v43.0.0
[INFO] [stderr]   Downloaded lexical-parse-integer v1.0.6
[INFO] [stderr]   Downloaded noodles-vcf v0.69.0
[INFO] [stderr]   Downloaded coitrees v0.4.0
[INFO] [stderr]   Downloaded datafusion-catalog v43.0.0
[INFO] [stderr]   Downloaded datafusion-functions-aggregate-common v43.0.0
[INFO] [stderr]   Downloaded arrow-json v53.4.1
[INFO] [stderr]   Downloaded datafusion-expr v43.0.0
[INFO] [stderr]   Downloaded arrow-buffer v53.4.1
[INFO] [stderr]   Downloaded datafusion-functions-aggregate v43.0.0
[INFO] [stderr]   Downloaded arrow-cast v53.4.1
[INFO] [stderr]   Downloaded lexical-parse-float v1.0.6
[INFO] [stderr]   Downloaded noodles-bam v0.71.0
[INFO] [stderr]   Downloaded datafusion-optimizer v43.0.0
[INFO] [stderr]   Downloaded datafusion-common v43.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr v43.0.0
[INFO] [stderr]   Downloaded sqlparser v0.51.0
[INFO] [stderr]   Downloaded noodles-cram v0.72.0
[INFO] [stderr]   Downloaded async-compression v0.4.19
[INFO] [stderr]   Downloaded lexical-write-float v1.0.6
[INFO] [stderr]   Downloaded parquet v53.4.1
[INFO] [stderr]   Downloaded noodles-sam v0.67.0
[INFO] [stderr]   Downloaded datafusion-physical-plan v43.0.0
[INFO] [stderr]   Downloaded datafusion v43.0.0
[INFO] [stderr]   Downloaded datafusion-sql v43.0.0
[INFO] [stderr]   Downloaded comfy-table v7.2.1
[INFO] [stderr]   Downloaded arrow-ipc v53.4.1
[INFO] [stderr]   Downloaded arrow-array v53.4.1
[INFO] [stderr]   Downloaded arrow v53.4.1
[INFO] [stderr]   Downloaded datafusion-expr-common v43.0.0
[INFO] [stderr]   Downloaded datafusion-functions v43.0.0
[INFO] [stderr]   Downloaded arrow-select v53.4.1
[INFO] [stderr]   Downloaded noodles-gff v0.40.0
[INFO] [stderr]   Downloaded lexical-util v1.0.7
[INFO] [stderr]   Downloaded arrow-arith v53.4.1
[INFO] [stderr]   Downloaded arrow-ord v53.4.1
[INFO] [stderr]   Downloaded arrow-row v53.4.1
[INFO] [stderr]   Downloaded exon-sam v0.32.4
[INFO] [stderr]   Downloaded noodles-fasta v0.46.0
[INFO] [stderr]   Downloaded lexical-core v1.0.6
[INFO] [stderr]   Downloaded datafusion-functions-window v43.0.0
[INFO] [stderr]   Downloaded datafusion-execution v43.0.0
[INFO] [stderr]   Downloaded datafusion-physical-expr-common v43.0.0
[INFO] [stderr]   Downloaded twox-hash v2.1.2
[INFO] [stderr]   Downloaded sqlparser_derive v0.2.2
[INFO] [stderr]   Downloaded exon-common v0.32.4
[INFO] [stderr]   Downloaded noodles-bcf v0.65.0
[INFO] [stderr]   Downloaded lexical-write-integer v1.0.6
[INFO] [stderr]   Downloaded object_store v0.11.2
[INFO] [stderr]   Downloaded datafusion-common-runtime v43.0.0
[INFO] [stderr]   Downloaded arrow-csv v53.4.1
[INFO] [stderr]   Downloaded flatbuffers v24.12.23
[INFO] [stderr]   Downloaded arrow-data v53.4.1
[INFO] [stderr]   Downloaded datafusion-physical-optimizer v43.0.0
[INFO] [stderr]   Downloaded arrow-string v53.4.1
[INFO] [stderr]   Downloaded arrow-schema v53.4.1
[INFO] [stderr]   Downloaded noodles-fastq v0.16.0
[INFO] [stderr]   Downloaded snafu-derive v0.8.9
[INFO] [stderr]   Downloaded snafu v0.8.9
[INFO] [stderr]   Downloaded noodles v0.86.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 771828ec6c9b59c55875f9f5ff6ad2d3b72d9bb363b1335dba3c94195715a84a
[INFO] running `Command { std: "docker" "start" "-a" "771828ec6c9b59c55875f9f5ff6ad2d3b72d9bb363b1335dba3c94195715a84a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "771828ec6c9b59c55875f9f5ff6ad2d3b72d9bb363b1335dba3c94195715a84a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "771828ec6c9b59c55875f9f5ff6ad2d3b72d9bb363b1335dba3c94195715a84a", kill_on_drop: false }`
[INFO] [stdout] 771828ec6c9b59c55875f9f5ff6ad2d3b72d9bb363b1335dba3c94195715a84a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 100558d8210e5ce39e69894a4bb0a84e034e9eb5d03ef658c37f99fd6d425f5f
[INFO] running `Command { std: "docker" "start" "-a" "100558d8210e5ce39e69894a4bb0a84e034e9eb5d03ef658c37f99fd6d425f5f", kill_on_drop: false }`
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling phf_shared v0.12.1
[INFO] [stderr]    Compiling chrono-tz v0.10.4
[INFO] [stderr]    Compiling arrow-schema v53.4.1
[INFO] [stderr]    Compiling phf v0.12.1
[INFO] [stderr]    Compiling tokio v1.47.1
[INFO] [stderr]    Compiling cc v1.2.39
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling hashbrown v0.15.5
[INFO] [stderr]    Compiling flate2 v1.1.2
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling futures-util v0.3.31
[INFO] [stderr]    Compiling semver v1.0.27
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[INFO] [stderr]    Compiling lz4_flex v0.11.5
[INFO] [stderr]    Compiling zstd-sys v2.0.13+zstd.1.5.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
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[INFO] [stderr]    Compiling csv v1.3.1
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[INFO] [stderr]    Compiling ordered-float v2.10.1
[INFO] [stderr]    Compiling brotli-decompressor v4.0.3
[INFO] [stderr]    Compiling integer-encoding v3.0.4
[INFO] [stderr]    Compiling humantime v2.3.0
[INFO] [stderr]    Compiling object_store v0.11.2
[INFO] [stderr]    Compiling thrift v0.17.0
[INFO] [stderr]    Compiling brotli v7.0.0
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[INFO] [stderr]    Compiling twox-hash v1.6.3
[INFO] [stderr]    Compiling sqlparser_derive v0.2.2
[INFO] [stderr]    Compiling getrandom v0.2.16
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling sqlparser v0.51.0
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[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling petgraph v0.6.5
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[INFO] [stderr]    Compiling strum v0.26.3
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[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling arrow-array v53.4.1
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling bstr v1.12.0
[INFO] [stderr]    Compiling noodles-bgzf v0.34.0
[INFO] [stderr]    Compiling noodles-core v0.15.0
[INFO] [stderr]    Compiling md-5 v0.10.6
[INFO] [stderr]    Compiling blake3 v1.8.2
[INFO] [stderr]    Compiling bzip2 v0.5.2
[INFO] [stderr]    Compiling datafusion-common-runtime v43.0.0
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling arrayvec v0.7.6
[INFO] [stderr]    Compiling noodles-csi v0.41.0
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling sha2 v0.10.9
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling blake2 v0.10.6
[INFO] [stderr]    Compiling noodles-sam v0.67.0
[INFO] [stderr]    Compiling noodles-fasta v0.46.0
[INFO] [stderr]    Compiling glob v0.3.3
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[INFO] [stderr]    Compiling arrow-select v53.4.1
[INFO] [stderr]    Compiling arrow-arith v53.4.1
[INFO] [stderr]    Compiling arrow-row v53.4.1
[INFO] [stderr]    Compiling arrow-cast v53.4.1
[INFO] [stderr]    Compiling arrow-ord v53.4.1
[INFO] [stderr]    Compiling arrow-string v53.4.1
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling async-compression v0.4.19
[INFO] [stderr]    Compiling noodles-bam v0.71.0
[INFO] [stderr]    Compiling arrow-ipc v53.4.1
[INFO] [stderr]    Compiling arrow-json v53.4.1
[INFO] [stderr]    Compiling arrow-csv v53.4.1
[INFO] [stderr]    Compiling noodles-cram v0.72.0
[INFO] [stderr]    Compiling parquet v53.4.1
[INFO] [stderr]    Compiling arrow v53.4.1
[INFO] [stderr]    Compiling noodles v0.86.0
[INFO] [stderr]    Compiling datafusion-common v43.0.0
[INFO] [stderr]    Compiling datafusion-expr-common v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-expr-common v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-aggregate-common v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-window-common v43.0.0
[INFO] [stderr]    Compiling datafusion-expr v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-expr v43.0.0
[INFO] [stderr]    Compiling datafusion-execution v43.0.0
[INFO] [stderr]    Compiling datafusion-sql v43.0.0
[INFO] [stderr]    Compiling datafusion-functions v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-plan v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-aggregate v43.0.0
[INFO] [stderr]    Compiling datafusion-optimizer v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-window v43.0.0
[INFO] [stderr]    Compiling datafusion-functions-nested v43.0.0
[INFO] [stderr]    Compiling datafusion-catalog v43.0.0
[INFO] [stderr]    Compiling datafusion-physical-optimizer v43.0.0
[INFO] [stderr]    Compiling datafusion v43.0.0
[INFO] [stderr]    Compiling exon-common v0.32.4
[INFO] [stderr]    Compiling exon-sam v0.32.4
[INFO] [stderr]    Compiling exon-cram v0.32.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 7m 21s
[INFO] running `Command { std: "docker" "inspect" "100558d8210e5ce39e69894a4bb0a84e034e9eb5d03ef658c37f99fd6d425f5f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "100558d8210e5ce39e69894a4bb0a84e034e9eb5d03ef658c37f99fd6d425f5f", kill_on_drop: false }`
[INFO] [stdout] 100558d8210e5ce39e69894a4bb0a84e034e9eb5d03ef658c37f99fd6d425f5f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a4d45832f24803e0c8990ace0f3ac9aefa4cf9f9802c3ccf44513769cd3ad38c
[INFO] running `Command { std: "docker" "start" "-a" "a4d45832f24803e0c8990ace0f3ac9aefa4cf9f9802c3ccf44513769cd3ad38c", kill_on_drop: false }`
[INFO] [stderr]    Compiling exon-cram v0.32.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 3.35s
[INFO] running `Command { std: "docker" "inspect" "a4d45832f24803e0c8990ace0f3ac9aefa4cf9f9802c3ccf44513769cd3ad38c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a4d45832f24803e0c8990ace0f3ac9aefa4cf9f9802c3ccf44513769cd3ad38c", kill_on_drop: false }`
[INFO] [stdout] a4d45832f24803e0c8990ace0f3ac9aefa4cf9f9802c3ccf44513769cd3ad38c