[INFO] cloning repository https://github.com/rderelle/skalo
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/rderelle/skalo" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frderelle%2Fskalo", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frderelle%2Fskalo'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 1470ce8b916721ae2bf2ff8446fea03415cac800
[INFO] building rderelle/skalo against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frderelle%2Fskalo" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/rderelle/skalo
[INFO] finished tweaking git repo https://github.com/rderelle/skalo
[INFO] tweaked toml for git repo https://github.com/rderelle/skalo written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/rderelle/skalo on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 196 packages to latest compatible versions
[INFO] [stderr]       Adding hashbrown v0.14.5 (available: v0.16.0)
[INFO] [stderr]       Adding indicatif v0.17.11 (available: v0.18.0)
[INFO] [stderr]       Adding ska v0.3.11 (available: v0.4.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded snap v1.1.1
[INFO] [stderr]   Downloaded noodles-core v0.14.0
[INFO] [stderr]   Downloaded ska v0.3.11
[INFO] [stderr]   Downloaded slog-async v2.8.0
[INFO] [stderr]   Downloaded dashmap v6.1.0
[INFO] [stderr]   Downloaded seq_io v0.3.4
[INFO] [stderr]   Downloaded noodles-vcf v0.49.0
[INFO] [stderr]   Downloaded bzip2 v0.4.4
[INFO] [stderr]   Downloaded slog-term v2.9.2
[INFO] [stderr]   Downloaded bytecount v0.6.9
[INFO] [stderr]   Downloaded noodles-bgzf v0.26.0
[INFO] [stderr]   Downloaded slog-json v2.6.1
[INFO] [stderr]   Downloaded slog v2.7.0
[INFO] [stderr]   Downloaded term v1.2.0
[INFO] [stderr]   Downloaded buffer-redux v1.0.2
[INFO] [stderr]   Downloaded needletail v0.5.1
[INFO] [stderr]   Downloaded noodles-csi v0.30.0
[INFO] [stderr]   Downloaded noodles-tabix v0.36.0
[INFO] [stderr]   Downloaded simple_logger v4.3.3
[INFO] [stderr]   Downloaded bzip2-sys v0.1.13+1.0.8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f1d50649b9cb5a93dba0f5f3f1ed51cd889b54376f3f6684465a0eec3d3fb993
[INFO] running `Command { std: "docker" "start" "-a" "f1d50649b9cb5a93dba0f5f3f1ed51cd889b54376f3f6684465a0eec3d3fb993", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f1d50649b9cb5a93dba0f5f3f1ed51cd889b54376f3f6684465a0eec3d3fb993", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f1d50649b9cb5a93dba0f5f3f1ed51cd889b54376f3f6684465a0eec3d3fb993", kill_on_drop: false }`
[INFO] [stdout] f1d50649b9cb5a93dba0f5f3f1ed51cd889b54376f3f6684465a0eec3d3fb993
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2a1c12e2180189f4bc444c8499f26295491b9e9e5789d5f1a518807b00dec93a
[INFO] running `Command { std: "docker" "start" "-a" "2a1c12e2180189f4bc444c8499f26295491b9e9e5789d5f1a518807b00dec93a", kill_on_drop: false }`
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling slog v2.7.0
[INFO] [stderr]    Compiling num_threads v0.1.7
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling time-macros v0.2.24
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling slog-async v2.8.0
[INFO] [stderr]    Compiling noodles-core v0.14.0
[INFO] [stderr]    Compiling iana-time-zone v0.1.64
[INFO] [stderr]    Compiling anstyle v1.0.13
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling is-terminal v0.4.16
[INFO] [stderr]    Compiling buffer-redux v1.0.2
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]    Compiling flate2 v1.1.2
[INFO] [stderr]    Compiling anstream v0.6.20
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling unicode-width v0.2.1
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling term v1.2.0
[INFO] [stderr]    Compiling take_mut v0.2.2
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]    Compiling console v0.15.11
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling noodles-bgzf v0.26.0
[INFO] [stderr]    Compiling clap_builder v4.5.48
[INFO] [stderr]    Compiling instant v0.1.13
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling number_prefix v0.4.0
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling rayon v1.11.0
[INFO] [stderr]    Compiling chrono v0.4.42
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling parking_lot_core v0.9.11
[INFO] [stderr]    Compiling noodles-csi v0.30.0
[INFO] [stderr]    Compiling regex-automata v0.4.11
[INFO] [stderr]    Compiling needletail v0.5.1
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling scoped_threadpool v0.1.9
[INFO] [stderr]    Compiling time v0.3.44
[INFO] [stderr]    Compiling noodles-tabix v0.36.0
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling noodles-vcf v0.49.0
[INFO] [stderr]    Compiling slog-term v2.9.2
[INFO] [stderr]    Compiling simple_logger v4.3.3
[INFO] [stderr]    Compiling regex v1.11.3
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling indicatif v0.17.11
[INFO] [stderr]    Compiling dashmap v6.1.0
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling clap_derive v4.5.47
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling clap v4.5.48
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling slog-json v2.6.1
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling seq_io v0.3.4
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_xoshiro v0.6.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling argmin-math v0.3.0
[INFO] [stderr]    Compiling argmin v0.9.0
[INFO] [stderr]    Compiling ska v0.3.11
[INFO] [stderr]    Compiling skalo v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 49.99s
[INFO] running `Command { std: "docker" "inspect" "2a1c12e2180189f4bc444c8499f26295491b9e9e5789d5f1a518807b00dec93a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2a1c12e2180189f4bc444c8499f26295491b9e9e5789d5f1a518807b00dec93a", kill_on_drop: false }`
[INFO] [stdout] 2a1c12e2180189f4bc444c8499f26295491b9e9e5789d5f1a518807b00dec93a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 589d09bc6e3a8c18cc86d560bff92403dbc4ca82ef5005aa2d4fc0a4c943ed49
[INFO] running `Command { std: "docker" "start" "-a" "589d09bc6e3a8c18cc86d560bff92403dbc4ca82ef5005aa2d4fc0a4c943ed49", kill_on_drop: false }`
[INFO] [stderr]    Compiling skalo v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.07s
[INFO] running `Command { std: "docker" "inspect" "589d09bc6e3a8c18cc86d560bff92403dbc4ca82ef5005aa2d4fc0a4c943ed49", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "589d09bc6e3a8c18cc86d560bff92403dbc4ca82ef5005aa2d4fc0a4c943ed49", kill_on_drop: false }`
[INFO] [stdout] 589d09bc6e3a8c18cc86d560bff92403dbc4ca82ef5005aa2d4fc0a4c943ed49