[INFO] cloning repository https://github.com/davidlougheed/strkit_rust_ext [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/davidlougheed/strkit_rust_ext" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] f91f9a7fdfadcda0c6643367bf31a6d77962c65c [INFO] building davidlougheed/strkit_rust_ext against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fdavidlougheed%2Fstrkit_rust_ext" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/davidlougheed/strkit_rust_ext [INFO] finished tweaking git repo https://github.com/davidlougheed/strkit_rust_ext [INFO] tweaked toml for git repo https://github.com/davidlougheed/strkit_rust_ext written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/davidlougheed/strkit_rust_ext on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/davidlougheed/strkit_rust_ext already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded virtue v0.0.18 [INFO] [stderr] Downloaded unty v0.0.4 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded bincode_derive v2.0.1 [INFO] [stderr] Downloaded simba v0.9.0 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] [stderr] Downloaded parasail-rs v0.8.1 [INFO] [stderr] Downloaded pyo3-macros v0.25.1 [INFO] [stderr] Downloaded unindent v0.2.4 [INFO] [stderr] Downloaded pyo3-ffi v0.25.1 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded rust-htslib v0.50.0 [INFO] [stderr] Downloaded bio v2.2.0 [INFO] [stderr] Downloaded target-lexicon v0.13.2 [INFO] [stderr] Downloaded pyo3-build-config v0.25.1 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded ordered-float v5.0.0 [INFO] [stderr] Downloaded bytecount v0.6.9 [INFO] [stderr] Downloaded lzma-sys v0.1.20 [INFO] [stderr] Downloaded bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded pyo3 v0.25.1 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded matrixmultiply v0.3.10 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded rust-lapper v1.2.0 [INFO] [stderr] Downloaded libdeflate-sys v1.24.0 [INFO] [stderr] Downloaded libparasail-sys v0.1.12 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded bincode v2.0.1 [INFO] [stderr] Downloaded numpy v0.25.0 [INFO] [stderr] Downloaded pyo3-macros-backend v0.25.1 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded python3-dll-a v0.2.14 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 91e79a593eed4a53ca0d36650b7f0ce088f388e8e00c8d666ff5c50b6fc7a0e8 [INFO] running `Command { std: "docker" "start" "-a" "91e79a593eed4a53ca0d36650b7f0ce088f388e8e00c8d666ff5c50b6fc7a0e8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "91e79a593eed4a53ca0d36650b7f0ce088f388e8e00c8d666ff5c50b6fc7a0e8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "91e79a593eed4a53ca0d36650b7f0ce088f388e8e00c8d666ff5c50b6fc7a0e8", kill_on_drop: false }` [INFO] [stdout] 91e79a593eed4a53ca0d36650b7f0ce088f388e8e00c8d666ff5c50b6fc7a0e8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ff3970d05172fecc7b18c70d94d7e9081f96a05184041699e0e084258e293f86 [INFO] running `Command { std: "docker" "start" "-a" "ff3970d05172fecc7b18c70d94d7e9081f96a05184041699e0e084258e293f86", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling target-lexicon v0.13.2 [INFO] [stderr] Compiling python3-dll-a v0.2.14 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling rustix v0.38.44 [INFO] [stderr] Compiling prettyplease v0.2.37 [INFO] [stderr] Compiling bitflags v2.9.3 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling linux-raw-sys v0.4.15 [INFO] [stderr] Compiling zerocopy v0.8.26 [INFO] [stderr] Compiling regex-syntax v0.8.6 [INFO] [stderr] Compiling jobserver v0.1.34 [INFO] [stderr] Compiling libloading v0.8.8 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling home v0.5.11 [INFO] [stderr] Compiling log v0.4.27 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling cc v1.2.34 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling bytemuck v1.23.2 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling typenum v1.18.0 [INFO] [stderr] Compiling thiserror v2.0.16 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling pyo3-build-config v0.25.1 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling unindent v0.2.4 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling virtue v0.0.18 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling regex-automata v0.4.10 [INFO] [stderr] Compiling indoc v2.0.6 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling petgraph v0.7.1 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling ordered-float v5.0.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling which v4.4.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling bincode_derive v2.0.1 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling libdeflate-sys v1.24.0 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling pyo3-macros-backend v0.25.1 [INFO] [stderr] Compiling pyo3-ffi v0.25.1 [INFO] [stderr] Compiling pyo3 v0.25.1 [INFO] [stderr] Compiling numpy v0.25.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling unty v0.0.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling simba v0.9.0 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling regex v1.11.2 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling rand v0.9.2 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling rustc-hash v2.1.1 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling rust-lapper v1.2.0 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling zerovec-derive v0.11.1 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling thiserror-impl v2.0.16 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive_more-impl v2.0.1 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.0 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling derive_more v2.0.1 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.8.0 [INFO] [stderr] Compiling zerovec v0.11.4 [INFO] [stderr] Compiling zerotrie v0.2.2 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling tinystr v0.8.1 [INFO] [stderr] Compiling potential_utf v0.1.2 [INFO] [stderr] Compiling icu_locale_core v2.0.0 [INFO] [stderr] Compiling icu_collections v2.0.0 [INFO] [stderr] Compiling pyo3-macros v0.25.1 [INFO] [stderr] Compiling icu_provider v2.0.0 [INFO] [stderr] Compiling icu_properties v2.0.1 [INFO] [stderr] Compiling icu_normalizer v2.0.0 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling multimap v0.10.1 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling url v2.5.7 [INFO] [stderr] Compiling bincode v2.0.1 [INFO] [stderr] Compiling libparasail-sys v0.1.12 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling bio v2.2.0 [INFO] [stderr] Compiling rust-htslib v0.50.0 [INFO] [stderr] Compiling parasail-rs v0.8.1 [INFO] [stderr] Compiling strkit_rust_ext v0.23.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 6m 17s [INFO] running `Command { std: "docker" "inspect" "ff3970d05172fecc7b18c70d94d7e9081f96a05184041699e0e084258e293f86", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ff3970d05172fecc7b18c70d94d7e9081f96a05184041699e0e084258e293f86", kill_on_drop: false }` [INFO] [stdout] ff3970d05172fecc7b18c70d94d7e9081f96a05184041699e0e084258e293f86 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9d8cf4c9c98541d26dad1d41b44129941ff03a0f267fcfe1e57cc4a5d9e12a54 [INFO] running `Command { std: "docker" "start" "-a" "9d8cf4c9c98541d26dad1d41b44129941ff03a0f267fcfe1e57cc4a5d9e12a54", kill_on_drop: false }` [INFO] [stderr] Compiling strkit_rust_ext v0.23.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.88s [INFO] running `Command { std: "docker" "inspect" "9d8cf4c9c98541d26dad1d41b44129941ff03a0f267fcfe1e57cc4a5d9e12a54", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9d8cf4c9c98541d26dad1d41b44129941ff03a0f267fcfe1e57cc4a5d9e12a54", kill_on_drop: false }` [INFO] [stdout] 9d8cf4c9c98541d26dad1d41b44129941ff03a0f267fcfe1e57cc4a5d9e12a54