[INFO] cloning repository https://github.com/tkob-vh/umi-collapse-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/tkob-vh/umi-collapse-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 3f279b5075ddc97afd887dbdff610d65953170d1
[INFO] building tkob-vh/umi-collapse-rs against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftkob-vh%2Fumi-collapse-rs" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] removed /workspace/builds/worker-6-tc1/source/.cargo/config.toml
[INFO] removed /workspace/builds/worker-6-tc1/source/rust-toolchain.toml
[INFO] started tweaking git repo https://github.com/tkob-vh/umi-collapse-rs
[INFO] finished tweaking git repo https://github.com/tkob-vh/umi-collapse-rs
[INFO] tweaked toml for git repo https://github.com/tkob-vh/umi-collapse-rs written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/tkob-vh/umi-collapse-rs on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/tkob-vh/umi-collapse-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded pcre2-sys v0.2.9
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded pcre2 v0.2.9
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded curl-sys v0.4.80+curl-8.12.1
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.0+3.5.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 24c3c3eee30cfd22fa480ec1bb7fda0b97689a0ccc9f7abbda6aeb930d1dcc46
[INFO] running `Command { std: "docker" "start" "-a" "24c3c3eee30cfd22fa480ec1bb7fda0b97689a0ccc9f7abbda6aeb930d1dcc46", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "24c3c3eee30cfd22fa480ec1bb7fda0b97689a0ccc9f7abbda6aeb930d1dcc46", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "24c3c3eee30cfd22fa480ec1bb7fda0b97689a0ccc9f7abbda6aeb930d1dcc46", kill_on_drop: false }`
[INFO] [stdout] 24c3c3eee30cfd22fa480ec1bb7fda0b97689a0ccc9f7abbda6aeb930d1dcc46
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 80ef122eec1f7bd5103fb0a57ef3d00df2312d164645008a15ca9755cfdeb15b
[INFO] running `Command { std: "docker" "start" "-a" "80ef122eec1f7bd5103fb0a57ef3d00df2312d164645008a15ca9755cfdeb15b", kill_on_drop: false }`
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling icu_locid_transform_data v1.5.1
[INFO] [stderr]    Compiling icu_properties_data v1.5.1
[INFO] [stderr]    Compiling libloading v0.8.6
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling smallvec v1.15.0
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling icu_normalizer_data v1.5.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling icu_provider_macros v1.5.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling yoke-derive v0.7.5
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling openssl-src v300.5.0+3.5.0
[INFO] [stderr]    Compiling curl-sys v0.4.80+curl-8.12.1
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling pcre2-sys v0.2.9
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling openssl-sys v0.9.108
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling tracing v0.1.41
[INFO] [stderr]    Compiling pcre2 v0.2.9
[INFO] [stderr]    Compiling tracing-subscriber v0.3.19
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]    Compiling bumpalo v3.17.0
[INFO] [stderr]    Compiling yoke v0.7.5
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling zerovec v0.10.4
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling tinystr v0.7.6
[INFO] [stderr]    Compiling icu_collections v1.5.0
[INFO] [stderr]    Compiling icu_locid v1.5.0
[INFO] [stderr]    Compiling icu_provider v1.5.0
[INFO] [stderr]    Compiling icu_locid_transform v1.5.0
[INFO] [stderr]    Compiling icu_properties v1.5.1
[INFO] [stderr]    Compiling icu_normalizer v1.5.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling idna_adapter v1.2.0
[INFO] [stderr]    Compiling idna v1.0.3
[INFO] [stderr]    Compiling url v2.5.4
[INFO] [stderr]    Compiling rust-htslib v0.49.0
[INFO] [stderr]    Compiling umicollapse v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: struct `Combo` is never constructed
[INFO] [stdout]   --> src/data/combo.rs:10:12
[INFO] [stdout]    |
[INFO] [stdout] 10 | pub struct Combo<'bitset> {
[INFO] [stdout]    |            ^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `recursive_remove_near` is never used
[INFO] [stdout]   --> src/data/combo.rs:18:8
[INFO] [stdout]    |
[INFO] [stdout] 17 | impl<'a> Combo<'a> {
[INFO] [stdout]    | ------------------ method in this implementation
[INFO] [stdout] 18 |     fn recursive_remove_near(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/utils/cluster_tracker.rs:110:22
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub fn get_stats(&self, id: usize) -> &ClusterStats<R> {
[INFO] [stdout]     |                      ^^^^^                ^^^^^^^^^^^^^^^^
[INFO] [stdout]     |                      |                    ||
[INFO] [stdout]     |                      |                    |the same lifetime is hidden here
[INFO] [stdout]     |                      |                    the same lifetime is elided here
[INFO] [stdout]     |                      the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub fn get_stats(&self, id: usize) -> &ClusterStats<'_, R> {
[INFO] [stdout]     |                                                         +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 27s
[INFO] running `Command { std: "docker" "inspect" "80ef122eec1f7bd5103fb0a57ef3d00df2312d164645008a15ca9755cfdeb15b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "80ef122eec1f7bd5103fb0a57ef3d00df2312d164645008a15ca9755cfdeb15b", kill_on_drop: false }`
[INFO] [stdout] 80ef122eec1f7bd5103fb0a57ef3d00df2312d164645008a15ca9755cfdeb15b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6ed8bd7c3e9ab15bd109d8a3a0bbef72855bf11cb51abe147cb09847ccd74c9d
[INFO] running `Command { std: "docker" "start" "-a" "6ed8bd7c3e9ab15bd109d8a3a0bbef72855bf11cb51abe147cb09847ccd74c9d", kill_on_drop: false }`
[INFO] [stderr]    Compiling umicollapse v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: struct `Combo` is never constructed
[INFO] [stdout]   --> src/data/combo.rs:10:12
[INFO] [stdout]    |
[INFO] [stdout] 10 | pub struct Combo<'bitset> {
[INFO] [stdout]    |            ^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `recursive_remove_near` is never used
[INFO] [stdout]   --> src/data/combo.rs:18:8
[INFO] [stdout]    |
[INFO] [stdout] 17 | impl<'a> Combo<'a> {
[INFO] [stdout]    | ------------------ method in this implementation
[INFO] [stdout] 18 |     fn recursive_remove_near(
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/utils/cluster_tracker.rs:110:22
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub fn get_stats(&self, id: usize) -> &ClusterStats<R> {
[INFO] [stdout]     |                      ^^^^^                ^^^^^^^^^^^^^^^^
[INFO] [stdout]     |                      |                    ||
[INFO] [stdout]     |                      |                    |the same lifetime is hidden here
[INFO] [stdout]     |                      |                    the same lifetime is elided here
[INFO] [stdout]     |                      the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 110 |     pub fn get_stats(&self, id: usize) -> &ClusterStats<'_, R> {
[INFO] [stdout]     |                                                         +++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.20s
[INFO] running `Command { std: "docker" "inspect" "6ed8bd7c3e9ab15bd109d8a3a0bbef72855bf11cb51abe147cb09847ccd74c9d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6ed8bd7c3e9ab15bd109d8a3a0bbef72855bf11cb51abe147cb09847ccd74c9d", kill_on_drop: false }`
[INFO] [stdout] 6ed8bd7c3e9ab15bd109d8a3a0bbef72855bf11cb51abe147cb09847ccd74c9d
