[INFO] cloning repository https://github.com/OscarAspelin95/bam_rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/OscarAspelin95/bam_rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] cb26c11a6c42170386ef38d580b6475ff5cdb46c
[INFO] building OscarAspelin95/bam_rs against master#c7f6aa2869acdbf014d094c6e427e554e160b6db for pr-146237-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FOscarAspelin95%2Fbam_rs" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/OscarAspelin95/bam_rs
[INFO] finished tweaking git repo https://github.com/OscarAspelin95/bam_rs
[INFO] tweaked toml for git repo https://github.com/OscarAspelin95/bam_rs written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/OscarAspelin95/bam_rs on toolchain c7f6aa2869acdbf014d094c6e427e554e160b6db
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/OscarAspelin95/bam_rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded simple_logger v5.0.0
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]   Downloaded curl-sys v0.4.80+curl-8.12.1
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.0+3.5.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 5b59a10f62e7a7f173ef1872658b1b4d1b6d6040118111da13a8f76c47ef1f1d
[INFO] running `Command { std: "docker" "start" "-a" "5b59a10f62e7a7f173ef1872658b1b4d1b6d6040118111da13a8f76c47ef1f1d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "5b59a10f62e7a7f173ef1872658b1b4d1b6d6040118111da13a8f76c47ef1f1d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5b59a10f62e7a7f173ef1872658b1b4d1b6d6040118111da13a8f76c47ef1f1d", kill_on_drop: false }`
[INFO] [stdout] 5b59a10f62e7a7f173ef1872658b1b4d1b6d6040118111da13a8f76c47ef1f1d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 42ea6079e2fab28e91ced252b5b9a12f09b661af8afbecffbc8bdd21164d6fee
[INFO] running `Command { std: "docker" "start" "-a" "42ea6079e2fab28e91ced252b5b9a12f09b661af8afbecffbc8bdd21164d6fee", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.172
[INFO] [stderr]    Compiling icu_locid_transform_data v1.5.1
[INFO] [stderr]    Compiling glob v0.3.2
[INFO] [stderr]    Compiling icu_properties_data v1.5.1
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling icu_normalizer_data v1.5.1
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]    Compiling smallvec v1.15.0
[INFO] [stderr]    Compiling rustversion v1.0.20
[INFO] [stderr]    Compiling bitflags v2.9.0
[INFO] [stderr]    Compiling syn v2.0.101
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling libloading v0.8.6
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling time-core v0.1.4
[INFO] [stderr]    Compiling thiserror v2.0.12
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling deranged v0.4.0
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling anstream v0.6.18
[INFO] [stderr]    Compiling time-macros v0.2.22
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling clap_lex v0.7.4
[INFO] [stderr]    Compiling num_threads v0.1.7
[INFO] [stderr]    Compiling colored v2.2.0
[INFO] [stderr]    Compiling log v0.4.27
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling clap_builder v4.5.37
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling jobserver v0.1.33
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling time v0.3.41
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling cc v1.2.21
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling simple_logger v5.0.0
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling openssl-src v300.5.0+3.5.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.80+curl-8.12.1
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling openssl-sys v0.9.108
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.7.5
[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling icu_provider_macros v1.5.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling clap_derive v4.5.32
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling yoke v0.7.5
[INFO] [stderr]    Compiling zerovec v0.10.4
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling clap v4.5.37
[INFO] [stderr]    Compiling tinystr v0.7.6
[INFO] [stderr]    Compiling icu_collections v1.5.0
[INFO] [stderr]    Compiling icu_locid v1.5.0
[INFO] [stderr]    Compiling icu_provider v1.5.0
[INFO] [stderr]    Compiling icu_locid_transform v1.5.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling icu_properties v1.5.1
[INFO] [stderr]    Compiling icu_normalizer v1.5.0
[INFO] [stderr]    Compiling idna_adapter v1.2.0
[INFO] [stderr]    Compiling idna v1.0.3
[INFO] [stderr]    Compiling url v2.5.4
[INFO] [stderr]    Compiling rust-htslib v0.49.0
[INFO] [stderr]    Compiling bam_rs v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 36s
[INFO] running `Command { std: "docker" "inspect" "42ea6079e2fab28e91ced252b5b9a12f09b661af8afbecffbc8bdd21164d6fee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "42ea6079e2fab28e91ced252b5b9a12f09b661af8afbecffbc8bdd21164d6fee", kill_on_drop: false }`
[INFO] [stdout] 42ea6079e2fab28e91ced252b5b9a12f09b661af8afbecffbc8bdd21164d6fee
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+c7f6aa2869acdbf014d094c6e427e554e160b6db" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f65073717b08a78036e6312f189c73d6efc6f6f8ea432b2a220b32be560ed331
[INFO] running `Command { std: "docker" "start" "-a" "f65073717b08a78036e6312f189c73d6efc6f6f8ea432b2a220b32be560ed331", kill_on_drop: false }`
[INFO] [stderr]    Compiling bam_rs v0.0.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.77s
[INFO] running `Command { std: "docker" "inspect" "f65073717b08a78036e6312f189c73d6efc6f6f8ea432b2a220b32be560ed331", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f65073717b08a78036e6312f189c73d6efc6f6f8ea432b2a220b32be560ed331", kill_on_drop: false }`
[INFO] [stdout] f65073717b08a78036e6312f189c73d6efc6f6f8ea432b2a220b32be560ed331
