[INFO] fetching crate rust-htslib 0.50.0... [INFO] building rust-htslib-0.50.0 against try#d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6 for pr-146237-1 [INFO] extracting crate rust-htslib 0.50.0 into /workspace/builds/worker-1-tc2/source [INFO] started tweaking crates.io crate rust-htslib 0.50.0 [INFO] finished tweaking crates.io crate rust-htslib 0.50.0 [INFO] tweaked toml for crates.io crate rust-htslib 0.50.0 written to /workspace/builds/worker-1-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate rust-htslib 0.50.0 on toolchain d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rust-htslib 0.50.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6cc1442cb6bc2a891a38ad009a3aa7ab1c4d7c5647841801043efd57a261dfca [INFO] running `Command { std: "docker" "start" "-a" "6cc1442cb6bc2a891a38ad009a3aa7ab1c4d7c5647841801043efd57a261dfca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6cc1442cb6bc2a891a38ad009a3aa7ab1c4d7c5647841801043efd57a261dfca", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6cc1442cb6bc2a891a38ad009a3aa7ab1c4d7c5647841801043efd57a261dfca", kill_on_drop: false }` [INFO] [stdout] 6cc1442cb6bc2a891a38ad009a3aa7ab1c4d7c5647841801043efd57a261dfca [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] eb317052e6319b7d60b476b6cd91f2f157ee3ac40669016339b18fe363f16d08 [INFO] running `Command { std: "docker" "start" "-a" "eb317052e6319b7d60b476b6cd91f2f157ee3ac40669016339b18fe363f16d08", kill_on_drop: false }` [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling cfg-if v1.0.1 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling libloading v0.8.8 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling cc v1.2.29 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling openssl-src v300.5.1+3.5.1 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling openssl-sys v0.9.109 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling curl-sys v0.4.82+curl-8.14.1 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling rust-htslib v0.50.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:836:21 [INFO] [stdout] | [INFO] [stdout] 836 | pub fn aux_iter(&self) -> AuxIter { [INFO] [stdout] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 836 | pub fn aux_iter(&self) -> AuxIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/header.rs:109:21 [INFO] [stdout] | [INFO] [stdout] 109 | pub fn comments(&self) -> impl Iterator> { [INFO] [stdout] | ^^^^^ ^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 109 | pub fn comments(&self) -> impl Iterator> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1121:26 [INFO] [stdout] | [INFO] [stdout] 1121 | pub fn basemods_iter(&self) -> Result { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1121 | pub fn basemods_iter(&self) -> Result> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1128:35 [INFO] [stdout] | [INFO] [stdout] 1128 | pub fn basemods_position_iter(&self) -> Result { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1128 | pub fn basemods_position_iter(&self) -> Result> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1507:17 [INFO] [stdout] | [INFO] [stdout] 1507 | pub fn iter(&self) -> AuxArrayIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1507 | pub fn iter(&self) -> AuxArrayIter<'_, T> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/buffer.rs:160:17 [INFO] [stdout] | [INFO] [stdout] 160 | pub fn iter(&self) -> vec_deque::Iter> { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 160 | pub fn iter(&self) -> vec_deque::Iter<'_, Rc> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/buffer.rs:165:21 [INFO] [stdout] | [INFO] [stdout] 165 | pub fn iter_mut(&mut self) -> vec_deque::IterMut> { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 165 | pub fn iter_mut(&mut self) -> vec_deque::IterMut<'_, Rc> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5m 39s [INFO] running `Command { std: "docker" "inspect" "eb317052e6319b7d60b476b6cd91f2f157ee3ac40669016339b18fe363f16d08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "eb317052e6319b7d60b476b6cd91f2f157ee3ac40669016339b18fe363f16d08", kill_on_drop: false }` [INFO] [stdout] eb317052e6319b7d60b476b6cd91f2f157ee3ac40669016339b18fe363f16d08 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+d79d87d4c0f7f0d0785ad6e493cf8cf718ed89a6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4d4f2330520209287d60dbc0a0fb821c7c12feffa2a02c6621806d88a9ece589 [INFO] running `Command { std: "docker" "start" "-a" "4d4f2330520209287d60dbc0a0fb821c7c12feffa2a02c6621806d88a9ece589", kill_on_drop: false }` [INFO] [stderr] Compiling libloading v0.8.8 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling diff v0.1.13 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling tempfile v3.20.0 [INFO] [stderr] Compiling pretty_assertions v1.4.1 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling rust-htslib v0.50.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/buffer.rs:160:17 [INFO] [stdout] | [INFO] [stdout] 160 | pub fn iter(&self) -> vec_deque::Iter> { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 160 | pub fn iter(&self) -> vec_deque::Iter<'_, Rc> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/buffer.rs:165:21 [INFO] [stdout] | [INFO] [stdout] 165 | pub fn iter_mut(&mut self) -> vec_deque::IterMut> { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 165 | pub fn iter_mut(&mut self) -> vec_deque::IterMut<'_, Rc> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/header.rs:109:21 [INFO] [stdout] | [INFO] [stdout] 109 | pub fn comments(&self) -> impl Iterator> { [INFO] [stdout] | ^^^^^ ^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 109 | pub fn comments(&self) -> impl Iterator> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:836:21 [INFO] [stdout] | [INFO] [stdout] 836 | pub fn aux_iter(&self) -> AuxIter { [INFO] [stdout] | ^^^^^ ^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 836 | pub fn aux_iter(&self) -> AuxIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1121:26 [INFO] [stdout] | [INFO] [stdout] 1121 | pub fn basemods_iter(&self) -> Result { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1121 | pub fn basemods_iter(&self) -> Result> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1128:35 [INFO] [stdout] | [INFO] [stdout] 1128 | pub fn basemods_position_iter(&self) -> Result { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1128 | pub fn basemods_position_iter(&self) -> Result> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bam/record.rs:1507:17 [INFO] [stdout] | [INFO] [stdout] 1507 | pub fn iter(&self) -> AuxArrayIter { [INFO] [stdout] | ^^^^^ ^^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 1507 | pub fn iter(&self) -> AuxArrayIter<'_, T> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: couldn't read `src/bgzf/../../test/bgzip/plain.vcf`: No such file or directory (os error 2) [INFO] [stdout] --> src/bgzf/mod.rs:303:27 [INFO] [stdout] | [INFO] [stdout] 303 | const CONTENT: &str = include_str!("../../test/bgzip/plain.vcf"); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `rust-htslib` (lib test) due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "4d4f2330520209287d60dbc0a0fb821c7c12feffa2a02c6621806d88a9ece589", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4d4f2330520209287d60dbc0a0fb821c7c12feffa2a02c6621806d88a9ece589", kill_on_drop: false }` [INFO] [stdout] 4d4f2330520209287d60dbc0a0fb821c7c12feffa2a02c6621806d88a9ece589