[INFO] fetching crate sbml-sim 0.1.2... [INFO] building sbml-sim-0.1.2 against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237-1 [INFO] extracting crate sbml-sim 0.1.2 into /workspace/builds/worker-4-tc1/source [INFO] started tweaking crates.io crate sbml-sim 0.1.2 [INFO] finished tweaking crates.io crate sbml-sim 0.1.2 [INFO] tweaked toml for crates.io crate sbml-sim 0.1.2 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate sbml-sim 0.1.2 on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate sbml-sim 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded mathml-rs v0.1.2 [INFO] [stderr] Downloaded mathml-macros v0.1.1 [INFO] [stderr] Downloaded sbml-macros v0.1.1 [INFO] [stderr] Downloaded sbml-rs v0.1.1 [INFO] [stderr] Downloaded mathru v0.9.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4f3ea91d849a020b8b33d2ee929ed1f2e2adbb85a8d75f832006d90efbc1de2d [INFO] running `Command { std: "docker" "start" "-a" "4f3ea91d849a020b8b33d2ee929ed1f2e2adbb85a8d75f832006d90efbc1de2d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4f3ea91d849a020b8b33d2ee929ed1f2e2adbb85a8d75f832006d90efbc1de2d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4f3ea91d849a020b8b33d2ee929ed1f2e2adbb85a8d75f832006d90efbc1de2d", kill_on_drop: false }` [INFO] [stdout] 4f3ea91d849a020b8b33d2ee929ed1f2e2adbb85a8d75f832006d90efbc1de2d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 49e7ec63789e7bfc9bb077a124fca0025396b8cd84cf6c0b2010a63fd7af2010 [INFO] running `Command { std: "docker" "start" "-a" "49e7ec63789e7bfc9bb077a124fca0025396b8cd84cf6c0b2010a63fd7af2010", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.98 [INFO] [stderr] Compiling proc-macro2 v1.0.27 [INFO] [stderr] Compiling syn v1.0.73 [INFO] [stderr] Compiling convert_case v0.4.0 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling quick-xml v0.22.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling getrandom v0.2.3 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand_core v0.6.3 [INFO] [stderr] Compiling approx v0.5.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.4 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling libmath v0.2.1 [INFO] [stderr] Compiling mathru v0.9.1 [INFO] [stderr] Compiling mathml-macros v0.1.1 [INFO] [stderr] Compiling sbml-macros v0.1.1 [INFO] [stderr] Compiling mathml-rs v0.1.2 [INFO] [stderr] Compiling sbml-rs v0.1.1 [INFO] [stderr] Compiling sbml-sim v0.1.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `derivative` [INFO] [stdout] --> src/integrators/euler.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | let derivative = derivatives.get(species_id).unwrap(); [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_derivative` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `assignments` [INFO] [stdout] --> src/integrators/euler.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | assignments: &HashMap, [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_assignments` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `local_parameters` [INFO] [stdout] --> src/integrators/euler.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | local_parameters: &HashMap>, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_local_parameters` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `functions` [INFO] [stdout] --> src/integrators/euler.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | functions: &HashMap>, [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_functions` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step_size` [INFO] [stdout] --> src/integrators/euler.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | step_size: f64, [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_step_size` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/integrators/euler.rs:15:9 [INFO] [stdout] | [INFO] [stdout] 15 | let mut deltas: HashMap = HashMap::new(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `compartment` [INFO] [stdout] --> src/structs/bindings.rs:525:29 [INFO] [stdout] | [INFO] [stdout] 525 | let compartment = &species.compartment; [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_compartment` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `DEBUG` should have a snake case name [INFO] [stdout] --> src/main.rs:107:9 [INFO] [stdout] | [INFO] [stdout] 107 | let DEBUG = matches.is_present("debug"); [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case: `debug` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `DEBUG` should have a snake case name [INFO] [stdout] --> src/integrators/main.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 19 | DEBUG: bool, [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case: `debug` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.60s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: mathru v0.9.1, quick-xml v0.22.0 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "49e7ec63789e7bfc9bb077a124fca0025396b8cd84cf6c0b2010a63fd7af2010", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "49e7ec63789e7bfc9bb077a124fca0025396b8cd84cf6c0b2010a63fd7af2010", kill_on_drop: false }` [INFO] [stdout] 49e7ec63789e7bfc9bb077a124fca0025396b8cd84cf6c0b2010a63fd7af2010 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2442128ec9194b89f146ac7b3d4db703a0cfa73932bc5dc889c4fbd17c49f78d [INFO] running `Command { std: "docker" "start" "-a" "2442128ec9194b89f146ac7b3d4db703a0cfa73932bc5dc889c4fbd17c49f78d", kill_on_drop: false }` [INFO] [stderr] Compiling sbml-sim v0.1.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `derivative` [INFO] [stdout] --> src/integrators/euler.rs:17:13 [INFO] [stdout] | [INFO] [stdout] 17 | let derivative = derivatives.get(species_id).unwrap(); [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_derivative` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `assignments` [INFO] [stdout] --> src/integrators/euler.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | assignments: &HashMap, [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_assignments` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `local_parameters` [INFO] [stdout] --> src/integrators/euler.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | local_parameters: &HashMap>, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_local_parameters` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `functions` [INFO] [stdout] --> src/integrators/euler.rs:11:5 [INFO] [stdout] | [INFO] [stdout] 11 | functions: &HashMap>, [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_functions` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step_size` [INFO] [stdout] --> src/integrators/euler.rs:12:5 [INFO] [stdout] | [INFO] [stdout] 12 | step_size: f64, [INFO] [stdout] | ^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_step_size` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/integrators/euler.rs:15:9 [INFO] [stdout] | [INFO] [stdout] 15 | let mut deltas: HashMap = HashMap::new(); [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `compartment` [INFO] [stdout] --> src/structs/bindings.rs:525:29 [INFO] [stdout] | [INFO] [stdout] 525 | let compartment = &species.compartment; [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_compartment` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `DEBUG` should have a snake case name [INFO] [stdout] --> src/main.rs:107:9 [INFO] [stdout] | [INFO] [stdout] 107 | let DEBUG = matches.is_present("debug"); [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case: `debug` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `DEBUG` should have a snake case name [INFO] [stdout] --> src/integrators/main.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 19 | DEBUG: bool, [INFO] [stdout] | ^^^^^ help: convert the identifier to snake case: `debug` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.49s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: mathru v0.9.1, quick-xml v0.22.0 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "2442128ec9194b89f146ac7b3d4db703a0cfa73932bc5dc889c4fbd17c49f78d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2442128ec9194b89f146ac7b3d4db703a0cfa73932bc5dc889c4fbd17c49f78d", kill_on_drop: false }` [INFO] [stdout] 2442128ec9194b89f146ac7b3d4db703a0cfa73932bc5dc889c4fbd17c49f78d