[INFO] cloning repository https://github.com/lokxii/biosim [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/lokxii/biosim" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flokxii%2Fbiosim", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flokxii%2Fbiosim'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] a2340ccb4d7261b4fd5c20b5c4b42b0e80d0b1b6 [INFO] building lokxii/biosim against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Flokxii%2Fbiosim" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/lokxii/biosim [INFO] finished tweaking git repo https://github.com/lokxii/biosim [INFO] tweaked toml for git repo https://github.com/lokxii/biosim written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/lokxii/biosim on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/lokxii/biosim already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating git repository `https://github.com/huggingface/candle.git` [INFO] [stderr] Updating git submodule `https://github.com/NVIDIA/cutlass.git` [INFO] [stderr] Updating git repository `https://github.com/raylib-rs/raylib-rs.git` [INFO] [stderr] Updating git submodule `https://github.com/raylib-extras/rlImGui/` [INFO] [stderr] Updating git submodule `https://github.com/raysan5/raylib` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded crossbeam-deque v0.8.6 [INFO] [stderr] Downloaded chlorine v1.0.13 [INFO] [stderr] Downloaded mint v0.5.9 [INFO] [stderr] Downloaded either v1.15.0 [INFO] [stderr] Downloaded windows-targets v0.53.0 [INFO] [stderr] Downloaded crunchy v0.2.3 [INFO] [stderr] Downloaded crossbeam-utils v0.8.21 [INFO] [stderr] Downloaded getrandom v0.3.3 [INFO] [stderr] Downloaded gemm-c64 v0.17.1 [INFO] [stderr] Downloaded memmap2 v0.9.5 [INFO] [stderr] Downloaded cmake v0.1.54 [INFO] [stderr] Downloaded seq-macro v0.3.6 [INFO] [stderr] Downloaded gemm-c64 v0.18.2 [INFO] [stderr] Downloaded cc v1.2.24 [INFO] [stderr] Downloaded derive_arbitrary v1.4.1 [INFO] [stderr] Downloaded reborrow v0.5.5 [INFO] [stderr] Downloaded arbitrary v1.4.1 [INFO] [stderr] Downloaded gemm-f32 v0.18.2 [INFO] [stderr] Downloaded gemm-c32 v0.17.1 [INFO] [stderr] Downloaded sysctl v0.6.0 [INFO] [stderr] Downloaded gemm-f32 v0.17.1 [INFO] [stderr] Downloaded gemm-f16 v0.17.1 [INFO] [stderr] Downloaded bitflags v2.9.1 [INFO] [stderr] Downloaded gemm-common v0.17.1 [INFO] [stderr] Downloaded winnow v0.7.10 [INFO] [stderr] Downloaded imgui v0.12.0 [INFO] [stderr] Downloaded num-bigint v0.4.6 [INFO] [stderr] Downloaded half v2.6.0 [INFO] [stderr] Downloaded raw-cpuid v11.5.0 [INFO] [stderr] Downloaded bindgen v0.70.1 [INFO] [stderr] Downloaded zip v1.1.4 [INFO] [stderr] Downloaded rand_distr v0.5.1 [INFO] [stderr] Downloaded pulp v0.18.22 [INFO] [stderr] Downloaded raw-cpuid v10.7.0 [INFO] [stderr] Downloaded pulp v0.21.5 [INFO] [stderr] Downloaded toml_edit v0.22.26 [INFO] [stderr] Downloaded dyn-stack v0.10.0 [INFO] [stderr] Downloaded sysctl v0.5.5 [INFO] [stderr] Downloaded gemm v0.17.1 [INFO] [stderr] Downloaded enum-as-inner v0.6.1 [INFO] [stderr] Downloaded num-rational v0.4.2 [INFO] [stderr] Downloaded ug v0.4.0 [INFO] [stderr] Downloaded libm v0.2.15 [INFO] [stderr] Downloaded num_enum v0.7.3 [INFO] [stderr] Downloaded itertools v0.13.0 [INFO] [stderr] Downloaded prettyplease v0.2.32 [INFO] [stderr] Downloaded gemm-f64 v0.17.1 [INFO] [stderr] Downloaded gemm-f16 v0.18.2 [INFO] [stderr] Downloaded num v0.4.3 [INFO] [stderr] Downloaded bytemuck_derive v1.9.3 [INFO] [stderr] Downloaded windows_aarch64_gnullvm v0.53.0 [INFO] [stderr] Downloaded proc-macro-crate v3.3.0 [INFO] [stderr] Downloaded num_enum_derive v0.7.3 [INFO] [stderr] Downloaded glob v0.3.2 [INFO] [stderr] Downloaded libloading v0.8.8 [INFO] [stderr] Downloaded gemm-c32 v0.18.2 [INFO] [stderr] Downloaded windows_i686_gnullvm v0.53.0 [INFO] [stderr] Downloaded dyn-stack v0.13.0 [INFO] [stderr] Downloaded windows_i686_msvc v0.53.0 [INFO] [stderr] Downloaded windows_x86_64_gnu v0.53.0 [INFO] [stderr] Downloaded gemm-common v0.18.2 [INFO] [stderr] Downloaded gemm-f64 v0.18.2 [INFO] [stderr] Downloaded gemm v0.18.2 [INFO] [stderr] Downloaded windows_i686_gnu v0.53.0 [INFO] [stderr] Downloaded windows_x86_64_gnullvm v0.53.0 [INFO] [stderr] Downloaded windows_x86_64_msvc v0.53.0 [INFO] [stderr] Downloaded windows_aarch64_msvc v0.53.0 [INFO] [stderr] Downloaded num-complex v0.4.6 [INFO] [stderr] Downloaded bytemuck v1.23.0 [INFO] [stderr] Downloaded enum-iterator v2.1.0 [INFO] [stderr] Downloaded clang-sys v1.8.1 [INFO] [stderr] Downloaded safetensors v0.4.5 [INFO] [stderr] Downloaded imgui-sys v0.12.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a2000be9f5f3335e877fafaf9bfaa54798f161f348a3e16a98481e03272abf78 [INFO] running `Command { std: "docker" "start" "-a" "a2000be9f5f3335e877fafaf9bfaa54798f161f348a3e16a98481e03272abf78", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a2000be9f5f3335e877fafaf9bfaa54798f161f348a3e16a98481e03272abf78", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a2000be9f5f3335e877fafaf9bfaa54798f161f348a3e16a98481e03272abf78", kill_on_drop: false }` [INFO] [stdout] a2000be9f5f3335e877fafaf9bfaa54798f161f348a3e16a98481e03272abf78 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5e9142c78f9245d38ad323bd75bd4372f48ebd3c446142856f8d6f95e6f75bdd [INFO] running `Command { std: "docker" "start" "-a" "5e9142c78f9245d38ad323bd75bd4372f48ebd3c446142856f8d6f95e6f75bdd", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.95 [INFO] [stderr] Compiling unicode-ident v1.0.18 [INFO] [stderr] Compiling libc v0.2.172 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling zerocopy v0.8.25 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling reborrow v0.5.5 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling seq-macro v0.3.6 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling version_check v0.9.5 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling raw-cpuid v11.5.0 [INFO] [stderr] Compiling raw-cpuid v10.7.0 [INFO] [stderr] Compiling libloading v0.8.8 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling equivalent v1.0.2 [INFO] [stderr] Compiling prettyplease v0.2.32 [INFO] [stderr] Compiling hashbrown v0.15.3 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling winnow v0.7.10 [INFO] [stderr] Compiling pulp v0.21.5 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling toml_datetime v0.6.9 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling bindgen v0.70.1 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling itoa v1.0.15 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling scopeguard v1.2.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling log v0.4.27 [INFO] [stderr] Compiling syn v2.0.101 [INFO] [stderr] Compiling smallvec v1.15.0 [INFO] [stderr] Compiling ryu v1.0.20 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling stable_deref_trait v1.2.0 [INFO] [stderr] Compiling tracing-core v0.1.33 [INFO] [stderr] Compiling cc v1.2.24 [INFO] [stderr] Compiling zip v1.1.4 [INFO] [stderr] Compiling chlorine v1.0.13 [INFO] [stderr] Compiling pin-project-lite v0.2.16 [INFO] [stderr] Compiling mint v0.5.9 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling memmap2 v0.9.5 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling toml_edit v0.22.26 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling rand v0.9.1 [INFO] [stderr] Compiling imgui-sys v0.12.0 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling rand_distr v0.5.1 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling proc-macro-crate v3.3.0 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling bytemuck_derive v1.9.3 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling tracing-attributes v0.1.28 [INFO] [stderr] Compiling num_enum_derive v0.7.3 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling enum-iterator-derive v1.4.0 [INFO] [stderr] Compiling enum-iterator v2.1.0 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.7.5 [INFO] [stderr] Compiling num_enum v0.7.3 [INFO] [stderr] Compiling tracing v0.1.41 [INFO] [stderr] Compiling bytemuck v1.23.0 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling half v2.6.0 [INFO] [stderr] Compiling dyn-stack v0.13.0 [INFO] [stderr] Compiling dyn-stack v0.10.0 [INFO] [stderr] Compiling pulp v0.18.22 [INFO] [stderr] Compiling num v0.4.3 [INFO] [stderr] Compiling gemm-common v0.17.1 [INFO] [stderr] Compiling gemm-f32 v0.17.1 [INFO] [stderr] Compiling gemm-f64 v0.17.1 [INFO] [stderr] Compiling gemm-c32 v0.17.1 [INFO] [stderr] Compiling gemm-c64 v0.17.1 [INFO] [stderr] Compiling gemm-common v0.18.2 [INFO] [stderr] Compiling gemm-f16 v0.17.1 [INFO] [stderr] Compiling gemm-f32 v0.18.2 [INFO] [stderr] Compiling gemm-c64 v0.18.2 [INFO] [stderr] Compiling gemm-c32 v0.18.2 [INFO] [stderr] Compiling gemm-f64 v0.18.2 [INFO] [stderr] Compiling gemm v0.17.1 [INFO] [stderr] Compiling raylib-sys v5.6.0 (https://github.com/raylib-rs/raylib-rs.git#66cb8eca) [INFO] [stderr] Compiling gemm-f16 v0.18.2 [INFO] [stderr] Compiling gemm v0.18.2 [INFO] [stderr] Compiling imgui v0.12.0 [INFO] [stderr] Compiling safetensors v0.4.5 [INFO] [stderr] Compiling ug v0.4.0 [INFO] [stderr] Compiling candle-core v0.9.1 (https://github.com/huggingface/candle.git#5aed817f) [INFO] [stderr] Compiling candle-nn v0.9.1 (https://github.com/huggingface/candle.git#5aed817f) [INFO] [stderr] Compiling raylib v5.6.0 (https://github.com/raylib-rs/raylib-rs.git#66cb8eca) [INFO] [stderr] Compiling bio v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 44s [INFO] running `Command { std: "docker" "inspect" "5e9142c78f9245d38ad323bd75bd4372f48ebd3c446142856f8d6f95e6f75bdd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5e9142c78f9245d38ad323bd75bd4372f48ebd3c446142856f8d6f95e6f75bdd", kill_on_drop: false }` [INFO] [stdout] 5e9142c78f9245d38ad323bd75bd4372f48ebd3c446142856f8d6f95e6f75bdd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ec2ce9d6622825e4ef6d1e55d94c9b9e758a2a1fb1d33c21ed747b633982267d [INFO] running `Command { std: "docker" "start" "-a" "ec2ce9d6622825e4ef6d1e55d94c9b9e758a2a1fb1d33c21ed747b633982267d", kill_on_drop: false }` [INFO] [stderr] Compiling bio v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.73s [INFO] running `Command { std: "docker" "inspect" "ec2ce9d6622825e4ef6d1e55d94c9b9e758a2a1fb1d33c21ed747b633982267d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ec2ce9d6622825e4ef6d1e55d94c9b9e758a2a1fb1d33c21ed747b633982267d", kill_on_drop: false }` [INFO] [stdout] ec2ce9d6622825e4ef6d1e55d94c9b9e758a2a1fb1d33c21ed747b633982267d