[INFO] cloning repository https://github.com/jiangweiyao/fastqcount [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/jiangweiyao/fastqcount" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjiangweiyao%2Ffastqcount", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjiangweiyao%2Ffastqcount'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d9cebf57bd457a3185ec4cf811800d4084fcb4b4 [INFO] building jiangweiyao/fastqcount against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjiangweiyao%2Ffastqcount" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/jiangweiyao/fastqcount [INFO] finished tweaking git repo https://github.com/jiangweiyao/fastqcount [INFO] tweaked toml for git repo https://github.com/jiangweiyao/fastqcount written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/jiangweiyao/fastqcount on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/jiangweiyao/fastqcount already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clap_derive v4.5.28 [INFO] [stderr] Downloaded cmake v0.1.54 [INFO] [stderr] Downloaded kseq v0.5.3 [INFO] [stderr] Downloaded clap v4.5.30 [INFO] [stderr] Downloaded miniz_oxide v0.8.4 [INFO] [stderr] Downloaded cc v1.2.13 [INFO] [stderr] Downloaded flate2 v1.0.35 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded anyhow v1.0.95 [INFO] [stderr] Downloaded strum v0.25.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded indexmap v2.7.1 [INFO] [stderr] Downloaded syn v2.0.98 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded clap_builder v4.5.30 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded wide v0.7.32 [INFO] [stderr] Downloaded serde v1.0.217 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded ryu v1.0.19 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded petgraph v0.6.5 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded matrixmultiply v0.3.9 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded libm v0.2.11 [INFO] [stderr] Downloaded num-complex v0.4.6 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded strum_macros v0.25.3 [INFO] [stderr] Downloaded quote v1.0.38 [INFO] [stderr] Downloaded csv-core v0.1.11 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded ordered-float v3.9.2 [INFO] [stderr] Downloaded rawpointer v0.2.1 [INFO] [stderr] Downloaded nalgebra-macros v0.1.0 [INFO] [stderr] Downloaded rand_distr v0.4.3 [INFO] [stderr] Downloaded serde_derive v1.0.217 [INFO] [stderr] Downloaded once_cell v1.20.3 [INFO] [stderr] Downloaded proc-macro2 v1.0.93 [INFO] [stderr] Downloaded unicode-ident v1.0.16 [INFO] [stderr] Downloaded libz-sys v1.1.21 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded bytecount v0.6.8 [INFO] [stderr] Downloaded bytemuck v1.21.0 [INFO] [stderr] Downloaded rustversion v1.0.19 [INFO] [stderr] Downloaded libc v0.2.169 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2f177d19fea383b77a89051c1ef0f46937c9401532e376ae8af36b92dbdfd0f4 [INFO] running `Command { std: "docker" "start" "-a" "2f177d19fea383b77a89051c1ef0f46937c9401532e376ae8af36b92dbdfd0f4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2f177d19fea383b77a89051c1ef0f46937c9401532e376ae8af36b92dbdfd0f4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2f177d19fea383b77a89051c1ef0f46937c9401532e376ae8af36b92dbdfd0f4", kill_on_drop: false }` [INFO] [stdout] 2f177d19fea383b77a89051c1ef0f46937c9401532e376ae8af36b92dbdfd0f4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] cf5c48c3241ca86908aa0e03c269e00b2fe9d38fb44e2f369e67d50f4e4b21d4 [INFO] running `Command { std: "docker" "start" "-a" "cf5c48c3241ca86908aa0e03c269e00b2fe9d38fb44e2f369e67d50f4e4b21d4", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.93 [INFO] [stderr] Compiling unicode-ident v1.0.16 [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling serde v1.0.217 [INFO] [stderr] Compiling cc v1.2.13 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling bytemuck v1.21.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling pkg-config v0.3.31 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling typenum v1.17.0 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling syn v2.0.98 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling libz-sys v1.1.21 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling hashbrown v0.15.2 [INFO] [stderr] Compiling equivalent v1.0.1 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling anyhow v1.0.95 [INFO] [stderr] Compiling miniz_oxide v0.8.4 [INFO] [stderr] Compiling indexmap v2.7.1 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling itoa v1.0.14 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling ryu v1.0.19 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling clap_builder v4.5.30 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling serde_derive v1.0.217 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling ppv-lite86 v0.2.20 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling clap_derive v4.5.28 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling clap v4.5.30 [INFO] [stderr] Compiling flate2 v1.0.35 [INFO] [stderr] Compiling kseq v0.5.3 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling fastqcount v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 04s [INFO] running `Command { std: "docker" "inspect" "cf5c48c3241ca86908aa0e03c269e00b2fe9d38fb44e2f369e67d50f4e4b21d4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cf5c48c3241ca86908aa0e03c269e00b2fe9d38fb44e2f369e67d50f4e4b21d4", kill_on_drop: false }` [INFO] [stdout] cf5c48c3241ca86908aa0e03c269e00b2fe9d38fb44e2f369e67d50f4e4b21d4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ddc869d7da1e362f285e3bf628e959a9ee436631e0a157eec8f753fb282b65dc [INFO] running `Command { std: "docker" "start" "-a" "ddc869d7da1e362f285e3bf628e959a9ee436631e0a157eec8f753fb282b65dc", kill_on_drop: false }` [INFO] [stderr] Compiling fastqcount v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.37s [INFO] running `Command { std: "docker" "inspect" "ddc869d7da1e362f285e3bf628e959a9ee436631e0a157eec8f753fb282b65dc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ddc869d7da1e362f285e3bf628e959a9ee436631e0a157eec8f753fb282b65dc", kill_on_drop: false }` [INFO] [stdout] ddc869d7da1e362f285e3bf628e959a9ee436631e0a157eec8f753fb282b65dc