[INFO] cloning repository https://github.com/epiliper/tag_splitter [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/epiliper/tag_splitter" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fepiliper%2Ftag_splitter", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fepiliper%2Ftag_splitter'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 6ca240e88217cf4aeff4a1adfedf738a835e41fe [INFO] building epiliper/tag_splitter against master#ad85bc524b1ad696e42061ad8338d382dffbdbe5 for pr-146237-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fepiliper%2Ftag_splitter" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/epiliper/tag_splitter [INFO] finished tweaking git repo https://github.com/epiliper/tag_splitter [INFO] tweaked toml for git repo https://github.com/epiliper/tag_splitter written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/epiliper/tag_splitter on toolchain ad85bc524b1ad696e42061ad8338d382dffbdbe5 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/epiliper/tag_splitter already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded cmake v0.1.54 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded clap_derive v4.5.45 [INFO] [stderr] Downloaded cc v1.2.32 [INFO] [stderr] Downloaded rust-htslib v0.50.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded clap_builder v4.5.44 [INFO] [stderr] Downloaded thiserror-impl v2.0.14 [INFO] [stderr] Downloaded thiserror v2.0.14 [INFO] [stderr] Downloaded clap v4.5.45 [INFO] [stderr] Downloaded bindgen v0.69.5 [INFO] [stderr] Downloaded libz-sys v1.1.22 [INFO] [stderr] Downloaded curl-sys v0.4.83+curl-8.15.0 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded openssl-src v300.5.2+3.5.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e1e1e0f4c744c2e577a3963a008face2b5ef5a5ccc90ef6dc1dc91efc3a5c05e [INFO] running `Command { std: "docker" "start" "-a" "e1e1e0f4c744c2e577a3963a008face2b5ef5a5ccc90ef6dc1dc91efc3a5c05e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e1e1e0f4c744c2e577a3963a008face2b5ef5a5ccc90ef6dc1dc91efc3a5c05e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e1e1e0f4c744c2e577a3963a008face2b5ef5a5ccc90ef6dc1dc91efc3a5c05e", kill_on_drop: false }` [INFO] [stdout] e1e1e0f4c744c2e577a3963a008face2b5ef5a5ccc90ef6dc1dc91efc3a5c05e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 68374a7d5d3f36fe0084df9ddfb98534476cd8dda5ec1ea68620be38959a12b8 [INFO] running `Command { std: "docker" "start" "-a" "68374a7d5d3f36fe0084df9ddfb98534476cd8dda5ec1ea68620be38959a12b8", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.97 [INFO] [stderr] Compiling libc v0.2.175 [INFO] [stderr] Compiling memchr v2.7.5 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling writeable v0.6.1 [INFO] [stderr] Compiling litemap v0.8.0 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling icu_properties_data v2.0.1 [INFO] [stderr] Compiling icu_normalizer_data v2.0.0 [INFO] [stderr] Compiling cfg-if v1.0.1 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling bitflags v2.9.1 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling libloading v0.8.8 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling autocfg v1.5.0 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling thiserror v2.0.14 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling percent-encoding v2.3.1 [INFO] [stderr] Compiling anstyle v1.0.11 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling anstream v0.6.20 [INFO] [stderr] Compiling form_urlencoded v1.2.1 [INFO] [stderr] Compiling anyhow v1.0.99 [INFO] [stderr] Compiling clap_lex v0.7.5 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling strsim v0.11.1 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling clap_builder v4.5.44 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling syn v2.0.104 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling cc v1.2.32 [INFO] [stderr] Compiling num_cpus v1.17.0 [INFO] [stderr] Compiling indexmap v2.10.0 [INFO] [stderr] Compiling chrono v0.4.41 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling openssl-src v300.5.2+3.5.2 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling openssl-sys v0.9.109 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.83+curl-8.15.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.0 [INFO] [stderr] Compiling zerovec-derive v0.11.1 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling thiserror-impl v2.0.14 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling clap_derive v4.5.45 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling yoke v0.8.0 [INFO] [stderr] Compiling zerovec v0.11.4 [INFO] [stderr] Compiling zerotrie v0.2.2 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling tinystr v0.8.1 [INFO] [stderr] Compiling potential_utf v0.1.2 [INFO] [stderr] Compiling clap v4.5.45 [INFO] [stderr] Compiling icu_locale_core v2.0.0 [INFO] [stderr] Compiling icu_collections v2.0.0 [INFO] [stderr] Compiling icu_provider v2.0.0 [INFO] [stderr] Compiling icu_properties v2.0.1 [INFO] [stderr] Compiling icu_normalizer v2.0.0 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling idna v1.0.3 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling url v2.5.4 [INFO] [stderr] Compiling rust-htslib v0.50.0 [INFO] [stderr] Compiling tag_splitter v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:428:9 [INFO] [stdout] | [INFO] [stdout] 428 | let mut n_clusters_with_indels = 0; [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `contains_indels` is never used [INFO] [stdout] --> src/main.rs:200:8 [INFO] [stdout] | [INFO] [stdout] 184 | impl SeqMap { [INFO] [stdout] | ----------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 200 | fn contains_indels(&self) -> bool { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 37s [INFO] running `Command { std: "docker" "inspect" "68374a7d5d3f36fe0084df9ddfb98534476cd8dda5ec1ea68620be38959a12b8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "68374a7d5d3f36fe0084df9ddfb98534476cd8dda5ec1ea68620be38959a12b8", kill_on_drop: false }` [INFO] [stdout] 68374a7d5d3f36fe0084df9ddfb98534476cd8dda5ec1ea68620be38959a12b8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+ad85bc524b1ad696e42061ad8338d382dffbdbe5" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f9a10380c0c8962817f066cfa729c6f32aac349ea057c640a7f1dbf2b2711be7 [INFO] running `Command { std: "docker" "start" "-a" "f9a10380c0c8962817f066cfa729c6f32aac349ea057c640a7f1dbf2b2711be7", kill_on_drop: false }` [INFO] [stderr] Compiling tag_splitter v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:428:9 [INFO] [stdout] | [INFO] [stdout] 428 | let mut n_clusters_with_indels = 0; [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `contains_indels` is never used [INFO] [stdout] --> src/main.rs:200:8 [INFO] [stdout] | [INFO] [stdout] 184 | impl SeqMap { [INFO] [stdout] | ----------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 200 | fn contains_indels(&self) -> bool { [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.91s [INFO] running `Command { std: "docker" "inspect" "f9a10380c0c8962817f066cfa729c6f32aac349ea057c640a7f1dbf2b2711be7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f9a10380c0c8962817f066cfa729c6f32aac349ea057c640a7f1dbf2b2711be7", kill_on_drop: false }` [INFO] [stdout] f9a10380c0c8962817f066cfa729c6f32aac349ea057c640a7f1dbf2b2711be7