[INFO] fetching crate odgi-ffi 1.1.3... [INFO] testing odgi-ffi-1.1.3 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-8 [INFO] extracting crate odgi-ffi 1.1.3 into /workspace/builds/worker-0-tc2/source [INFO] started tweaking crates.io crate odgi-ffi 1.1.3 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate odgi-ffi 1.1.3 [INFO] tweaked toml for crates.io crate odgi-ffi 1.1.3 written to /workspace/builds/worker-0-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate odgi-ffi 1.1.3 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate odgi-ffi 1.1.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] edcf2994f2d7b833f7a60b4f3414cd03e1a6635a53dd23558e965cabccf0bd5b [INFO] running `Command { std: "docker" "start" "-a" "edcf2994f2d7b833f7a60b4f3414cd03e1a6635a53dd23558e965cabccf0bd5b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "edcf2994f2d7b833f7a60b4f3414cd03e1a6635a53dd23558e965cabccf0bd5b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "edcf2994f2d7b833f7a60b4f3414cd03e1a6635a53dd23558e965cabccf0bd5b", kill_on_drop: false }` [INFO] [stdout] edcf2994f2d7b833f7a60b4f3414cd03e1a6635a53dd23558e965cabccf0bd5b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4fe8c85bee5094c527e566f9917f6c46eb1309b9667574628a995c0b058f6f8d [INFO] running `Command { std: "docker" "start" "-a" "4fe8c85bee5094c527e566f9917f6c46eb1309b9667574628a995c0b058f6f8d", kill_on_drop: false }` [INFO] [stderr] Compiling find-msvc-tools v0.1.1 [INFO] [stderr] Compiling proc-macro2 v1.0.101 [INFO] [stderr] Compiling unicode-ident v1.0.19 [INFO] [stderr] Compiling equivalent v1.0.2 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling scratch v1.0.9 [INFO] [stderr] Compiling cxxbridge-flags v1.0.184 [INFO] [stderr] Compiling libc v0.2.175 [INFO] [stderr] Compiling unicode-width v0.2.1 [INFO] [stderr] Compiling termcolor v1.4.1 [INFO] [stderr] Compiling bitflags v2.9.4 [INFO] [stderr] Compiling foldhash v0.2.0 [INFO] [stderr] Compiling cc v1.2.37 [INFO] [stderr] Compiling rustix v1.1.2 [INFO] [stderr] Compiling codespan-reporting v0.12.0 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling indexmap v2.11.1 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling link-cplusplus v1.0.12 [INFO] [stderr] Compiling cxx v1.0.184 [INFO] [stderr] Compiling tempfile v3.22.0 [INFO] [stderr] Compiling cxx-build v1.0.184 [INFO] [stderr] Compiling cxxbridge-macro v1.0.184 [INFO] [stderr] Compiling odgi-ffi v1.1.3 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `odgi-ffi v1.1.3 (/opt/rustwide/workdir)` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/odgi-ffi-0571262e7ba3c2f7/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build" && CMAKE_PREFIX_PATH="" LC_ALL="C" "cmake" "/opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build" "-DBUILD_TESTS=OFF" "-DODGI_BUILD_DOCS=OFF" "-DCMAKE_EXE_LINKER_FLAGS=-lpthread" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Generic" [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") [INFO] [stderr] -- Could NOT find pybind11 (missing: pybind11_DIR) [INFO] [stderr] -- Building with CPU-only support. [INFO] [stderr] -- [INFO] [stderr] [INFO] [stderr] -- Checking for module 'sdsl-lite' [INFO] [stderr] -- Package 'sdsl-lite', required by 'virtual:world', not found [INFO] [stderr] -- Checking for module 'libdivsufsort' [INFO] [stderr] -- Package 'libdivsufsort', required by 'virtual:world', not found [INFO] [stderr] -- Compiling odgi sources with PIC=ON [INFO] [stderr] -- ODGI CMAKE_BUILD_TYPE: Generic [INFO] [stderr] -- ODGI CMAKE_CXX_FLAGS: -ffunction-sections -fdata-sections -fPIC -m64 -fPIC [INFO] [stderr] -- ODGI CMAKE_C_FLAGS: -ffunction-sections -fdata-sections -fPIC -m64 -fPIC [INFO] [stderr] -- Found OpenMP_CXX: -fopenmp (found version "4.5") [INFO] [stderr] -- Found OpenMP: TRUE (found version "4.5") [INFO] [stderr] -- pybind11 v2.12.0 dev1 [INFO] [stderr] -- Found Python: /usr/bin/python3 (found suitable version "3.12.3", minimum required is "3.6") found components: Interpreter Development.Module Development.Embed [INFO] [stderr] -- Performing Test HAS_FLTO [INFO] [stderr] -- Performing Test HAS_FLTO - Success [INFO] [stderr] -- Configuring done (3.1s) [INFO] [stderr] -- Generating done (0.1s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build" && LC_ALL="C" MAKEFLAGS="-j --jobserver-fds=8,9 --jobserver-auth=8,9" "cmake" "--build" "/opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build" "--target" "install" "--config" "Generic" [INFO] [stderr] [ 1%] Creating directories for 'libbf-EXT' [INFO] [stderr] [ 1%] Creating directories for 'gfakluge' [INFO] [stderr] [ 1%] Creating directories for 'handlegraph' [INFO] [stderr] [ 1%] Creating directories for 'bbhash' [INFO] [stderr] [ 1%] Creating directories for 'ska' [INFO] [stderr] [ 1%] Creating directories for 'sdsl-lite' [INFO] [stderr] [ 1%] Creating directories for 'hopscotch_map' [INFO] [stderr] [ 2%] Creating directories for 'intervaltree' [INFO] [stderr] [ 2%] Creating directories for 'tayweeargs' [INFO] [stderr] [ 3%] No download step for 'bbhash' [INFO] [stderr] [ 4%] Creating directories for 'cgranges' [INFO] [stderr] [ 4%] Creating directories for 'ips4o' [INFO] [stderr] [ 4%] Creating directories for 'structures' [INFO] [stderr] [ 5%] Creating directories for 'dynamic' [INFO] [stderr] [ 6%] No download step for 'handlegraph' [INFO] [stderr] [ 7%] No download step for 'ska' [INFO] [stderr] [ 7%] No download step for 'libbf-EXT' [INFO] [stderr] [ 7%] No download step for 'hopscotch_map' [INFO] [stderr] [ 8%] Creating directories for 'sparsepp' [INFO] [stderr] [ 8%] Creating directories for 'mmmulti' [INFO] [stderr] [ 8%] No download step for 'dynamic' [INFO] [stderr] [ 8%] No update step for 'handlegraph' [INFO] [stderr] [ 9%] Creating directories for 'atomicqueue' [INFO] [stderr] [ 9%] No update step for 'bbhash' [INFO] [stderr] [ 9%] No download step for 'intervaltree' [INFO] [stderr] [ 10%] No update step for 'ska' [INFO] [stderr] [ 10%] No download step for 'tayweeargs' [INFO] [stderr] [ 11%] No download step for 'sdsl-lite' [INFO] [stderr] [ 12%] No download step for 'ips4o' [INFO] [stderr] [ 12%] No download step for 'mmmulti' [INFO] [stderr] [ 12%] No download step for 'cgranges' [INFO] [stderr] [ 12%] No download step for 'gfakluge' [INFO] [stderr] [ 12%] No download step for 'structures' [INFO] [stderr] [ 12%] No update step for 'libbf-EXT' [INFO] [stderr] [ 12%] No update step for 'hopscotch_map' [INFO] [stderr] [ 12%] No update step for 'intervaltree' [INFO] [stderr] [ 12%] No download step for 'atomicqueue' [INFO] [stderr] [ 13%] No update step for 'mmmulti' [INFO] [stderr] [ 13%] No download step for 'sparsepp' [INFO] [stderr] [ 13%] No patch step for 'mmmulti' [INFO] [stderr] [ 14%] No patch step for 'bbhash' [INFO] [stderr] [ 14%] No update step for 'sdsl-lite' [INFO] [stderr] [ 14%] No update step for 'cgranges' [INFO] [stderr] [ 15%] No patch step for 'handlegraph' [INFO] [stderr] [ 15%] No patch step for 'intervaltree' [INFO] [stderr] [ 15%] No update step for 'tayweeargs' [INFO] [stderr] [ 15%] No update step for 'dynamic' [INFO] [stderr] [ 16%] No update step for 'gfakluge' [INFO] [stderr] [ 17%] No update step for 'structures' [INFO] [stderr] [ 17%] No patch step for 'ska' [INFO] [stderr] [ 18%] No update step for 'ips4o' [INFO] [stderr] [ 18%] No configure step for 'mmmulti' [INFO] [stderr] [ 19%] No patch step for 'sdsl-lite' [INFO] [stderr] [ 19%] No patch step for 'structures' [INFO] [stderr] [ 19%] No update step for 'sparsepp' [INFO] [stderr] [ 19%] Performing configure step for 'sdsl-lite' [INFO] [stderr] [ 19%] No configure step for 'bbhash' [INFO] [stderr] [ 19%] No patch step for 'dynamic' [INFO] [stderr] [ 19%] No patch step for 'hopscotch_map' [INFO] [stderr] [ 19%] No patch step for 'libbf-EXT' [INFO] [stderr] [ 19%] Performing configure step for 'handlegraph' [INFO] [stderr] [ 19%] No configure step for 'intervaltree' [INFO] [stderr] [ 19%] No patch step for 'ips4o' [INFO] [stderr] [ 19%] No patch step for 'gfakluge' [INFO] [stderr] [ 19%] No patch step for 'sparsepp' [INFO] [stderr] [ 20%] No configure step for 'dynamic' [INFO] [stderr] [ 21%] No patch step for 'tayweeargs' [INFO] [stderr] [ 21%] No build step for 'bbhash' [INFO] [stderr] [ 21%] No update step for 'atomicqueue' [INFO] [stderr] [ 21%] No configure step for 'structures' [INFO] [stderr] [ 21%] No build step for 'dynamic' [INFO] [stderr] [ 21%] No configure step for 'ska' [INFO] [stderr] [ 21%] No patch step for 'cgranges' [INFO] [stderr] [ 22%] Performing configure step for 'libbf-EXT' [INFO] [stderr] [ 22%] No install step for 'bbhash' [INFO] [stderr] [ 22%] No build step for 'mmmulti' [INFO] [stderr] [ 22%] No patch step for 'atomicqueue' [INFO] [stderr] [ 23%] No configure step for 'sparsepp' [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] [ 23%] No configure step for 'hopscotch_map' [INFO] [stderr] [ 23%] No build step for 'sparsepp' [INFO] [stderr] [ 24%] Performing configure step for 'tayweeargs' [INFO] [stderr] [ 25%] No build step for 'intervaltree' [INFO] [stderr] [ 26%] No configure step for 'cgranges' [INFO] [stderr] [ 27%] Completed 'bbhash' [INFO] [stderr] [ 27%] No build step for 'ska' [INFO] [stderr] [ 28%] No install step for 'mmmulti' [INFO] [stderr] [ 28%] No configure step for 'ips4o' [INFO] [stderr] [ 28%] No install step for 'sparsepp' [INFO] [stderr] -- The C compiler identification is GNU 13.3.0 [INFO] [stderr] -- The C compiler identification is GNU 13.3.0 [INFO] [stderr] [ 28%] No install step for 'dynamic' [INFO] [stderr] [ 29%] No build step for 'hopscotch_map' [INFO] [stderr] [ 30%] No build step for 'structures' [INFO] [stderr] [ 30%] No install step for 'intervaltree' [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] [ 30%] No build step for 'cgranges' [INFO] [stderr] [ 30%] Completed 'sparsepp' [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] [ 30%] Completed 'intervaltree' [INFO] [stderr] [ 31%] No install step for 'structures' [INFO] [stderr] [ 31%] No configure step for 'gfakluge' [INFO] [stderr] [ 32%] Completed 'mmmulti' [INFO] [stderr] [ 32%] No install step for 'ska' [INFO] [stderr] [ 32%] No configure step for 'atomicqueue' [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] [ 32%] Completed 'dynamic' [INFO] [stderr] [ 32%] Built target bbhash [INFO] [stderr] [ 33%] No build step for 'gfakluge' [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] [ 33%] No install step for 'cgranges' [INFO] [stderr] [ 34%] No build step for 'atomicqueue' [INFO] [stderr] [ 35%] Completed 'ska' [INFO] [stderr] [ 36%] No install step for 'hopscotch_map' [INFO] [stderr] [ 36%] No build step for 'ips4o' [INFO] [stderr] [ 36%] Built target dynamic [INFO] [stderr] [ 36%] Creating directories for 'picosha256' [INFO] [stderr] [ 36%] Built target ska [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] [ 36%] Completed 'structures' [INFO] [stderr] [ 37%] No install step for 'gfakluge' [INFO] [stderr] [ 37%] Built target intervaltree [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] [ 37%] No install step for 'atomicqueue' [INFO] [stderr] [ 37%] Completed 'hopscotch_map' [INFO] [stderr] [ 37%] Completed 'cgranges' [INFO] [stderr] [ 38%] Creating directories for 'sgd2' [INFO] [stderr] [ 38%] Built target sparsepp [INFO] [stderr] [ 38%] Creating directories for 'random_distributions' [INFO] [stderr] [ 38%] Built target structures [INFO] [stderr] [ 38%] Completed 'gfakluge' [INFO] [stderr] [ 38%] Creating directories for 'httplib' [INFO] [stderr] [ 38%] Completed 'atomicqueue' [INFO] [stderr] [ 39%] No download step for 'picosha256' [INFO] [stderr] [ 39%] Creating directories for 'xoshiro' [INFO] [stderr] [ 39%] Creating directories for 'dirtyzipf' [INFO] [stderr] [ 39%] Built target mmmulti [INFO] [stderr] [ 39%] No download step for 'random_distributions' [INFO] [stderr] [ 39%] No update step for 'picosha256' [INFO] [stderr] [ 39%] No install step for 'ips4o' [INFO] [stderr] [ 39%] No download step for 'sgd2' [INFO] [stderr] [ 39%] No download step for 'xoshiro' [INFO] [stderr] [ 39%] No download step for 'dirtyzipf' [INFO] [stderr] [ 39%] Built target hopscotch_map [INFO] [stderr] [ 40%] No patch step for 'picosha256' [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] [ 40%] Built target cgranges [INFO] [stderr] [ 40%] Built target gfakluge [INFO] [stderr] [ 40%] Built target atomicqueue [INFO] [stderr] [ 41%] No download step for 'httplib' [INFO] [stderr] [ 41%] No update step for 'sgd2' [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] [ 42%] Creating directories for 'mio' [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] [ 42%] No update step for 'random_distributions' [INFO] [stderr] [ 43%] No update step for 'dirtyzipf' [INFO] [stderr] [ 43%] Creating directories for 'atomicbitvector' [INFO] [stderr] [ 43%] No patch step for 'sgd2' [INFO] [stderr] [ 43%] No download step for 'mio' [INFO] [stderr] [ 43%] No patch step for 'dirtyzipf' [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] [ 43%] No update step for 'mio' [INFO] [stderr] [ 44%] No update step for 'xoshiro' [INFO] [stderr] [ 45%] No configure step for 'sgd2' [INFO] [stderr] [ 45%] No configure step for 'dirtyzipf' [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] [ 46%] Completed 'ips4o' [INFO] [stderr] [ 46%] No patch step for 'mio' [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] [ 46%] No patch step for 'xoshiro' [INFO] [stderr] [ 46%] No update step for 'httplib' [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc - skipped [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] [ 46%] No patch step for 'random_distributions' [INFO] [stderr] [ 47%] No configure step for 'mio' [INFO] [stderr] -- Performing Test CMAKE_HAVE_LIBC_PTHREAD [INFO] [stderr] [ 47%] No configure step for 'picosha256' [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Configuring done (1.6s) [INFO] [stderr] [ 47%] No build step for 'dirtyzipf' [INFO] [stderr] [ 48%] No download step for 'atomicbitvector' [INFO] [stderr] [ 48%] No build step for 'sgd2' [INFO] [stderr] [ 48%] Built target ips4o [INFO] [stderr] [ 49%] No patch step for 'httplib' [INFO] [stderr] [ 49%] No configure step for 'xoshiro' [INFO] [stderr] -- Generating done (0.1s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/tayweeargs-prefix/src/tayweeargs-build [INFO] [stderr] [ 49%] No build step for 'mio' [INFO] [stderr] [ 49%] No configure step for 'random_distributions' [INFO] [stderr] [ 49%] No install step for 'sgd2' [INFO] [stderr] [ 49%] No build step for 'picosha256' [INFO] [stderr] [ 50%] No install step for 'dirtyzipf' [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] [ 50%] No update step for 'atomicbitvector' [INFO] [stderr] [ 50%] No install step for 'picosha256' [INFO] [stderr] [ 51%] No build step for 'xoshiro' [INFO] [stderr] [ 51%] Completed 'sgd2' [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc - skipped [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] [ 52%] No build step for 'random_distributions' [INFO] [stderr] [ 52%] Performing build step for 'tayweeargs' [INFO] [stderr] -- Compiler is recent enough to support C++11. [INFO] [stderr] -- Performing Test HAVE_GCC_STD=C__11__WALL__WEXTRA__DNDEBUG [INFO] [stderr] [ 52%] No install step for 'mio' [INFO] [stderr] [ 54%] No install step for 'random_distributions' [INFO] [stderr] [ 53%] Completed 'dirtyzipf' [INFO] [stderr] [ 55%] No patch step for 'atomicbitvector' [INFO] [stderr] [ 55%] Completed 'random_distributions' [INFO] [stderr] [ 56%] No install step for 'xoshiro' [INFO] [stderr] [ 56%] Completed 'picosha256' [INFO] [stderr] [ 56%] No configure step for 'atomicbitvector' [INFO] [stderr] [ 56%] Completed 'xoshiro' [INFO] [stderr] [ 56%] Built target dirtyzipf [INFO] [stderr] [ 56%] No configure step for 'httplib' [INFO] [stderr] [ 56%] Built target sgd2 [INFO] [stderr] [ 9%] Building CXX object CMakeFiles/completion.dir/examples/completion.cxx.o [INFO] [stderr] [ 18%] Building CXX object CMakeFiles/argstest-multiple-inclusion.dir/test/multiple_inclusion_2.cxx.o [INFO] [stderr] [ 27%] Building CXX object CMakeFiles/argstest-multiple-inclusion.dir/test/multiple_inclusion_1.cxx.o [INFO] [stderr] [ 56%] No build step for 'httplib' [INFO] [stderr] [ 36%] Building CXX object CMakeFiles/argstest-windows-h.dir/test/windows_h.cxx.o [INFO] [stderr] [ 45%] Building CXX object CMakeFiles/gitlike.dir/examples/gitlike.cxx.o [INFO] [stderr] [ 56%] No build step for 'atomicbitvector' [INFO] [stderr] [ 56%] Completed 'mio' [INFO] [stderr] [ 56%] Built target picosha256 [INFO] [stderr] [ 54%] Building CXX object CMakeFiles/argstest.dir/test.cxx.o [INFO] [stderr] [ 56%] No install step for 'httplib' [INFO] [stderr] [ 56%] Built target random_distributions [INFO] [stderr] [ 56%] Built target mio [INFO] [stderr] -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success [INFO] [stderr] -- Found Threads: TRUE [INFO] [stderr] [ 56%] Built target xoshiro [INFO] [stderr] -- Configuring done (2.8s) [INFO] [stderr] [ 56%] No install step for 'atomicbitvector' [INFO] [stderr] [ 57%] Completed 'httplib' [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] [ 57%] Built target httplib [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- Configuring done (3.4s) [INFO] [stderr] [ 57%] Completed 'atomicbitvector' [INFO] [stderr] -- Generating done (0.3s) [INFO] [stderr] -- Performing Test HAVE_GCC_STD=C__11__WALL__WEXTRA__DNDEBUG - Success [INFO] [stderr] -- Performing Test HAVE_GCC_O3__FFAST_MATH__FUNROLL_LOOPS [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/libbf-EXT-prefix/src/libbf-EXT-build [INFO] [stderr] -- Generating done (0.1s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/handlegraph-prefix/src/handlegraph-build [INFO] [stderr] [ 57%] Performing build step for 'libbf-EXT' [INFO] [stderr] [ 57%] Performing build step for 'handlegraph' [INFO] [stderr] [ 57%] Built target atomicbitvector [INFO] [stderr] [ 4%] Building CXX object CMakeFiles/libbf_static.dir/src/bitvector.cpp.o [INFO] [stderr] [ 8%] Building CXX object CMakeFiles/libbf_static.dir/src/hash.cpp.o [INFO] [stderr] [ 13%] Building CXX object CMakeFiles/libbf_static.dir/src/counter_vector.cpp.o [INFO] [stderr] [ 21%] Building CXX object CMakeFiles/libbf_static.dir/src/bloom_filter/bitwise.cpp.o [INFO] [stderr] [ 26%] Building CXX object CMakeFiles/libbf_static.dir/src/bloom_filter/counting.cpp.o [INFO] [stderr] [ 17%] Building CXX object CMakeFiles/libbf_shared.dir/src/bitvector.cpp.o [INFO] [stderr] [ 30%] Building CXX object CMakeFiles/libbf_static.dir/src/bloom_filter/basic.cpp.o [INFO] [stderr] [ 34%] Building CXX object CMakeFiles/libbf_static.dir/src/bloom_filter/a2.cpp.o [INFO] [stderr] [ 2%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/deletable_handle_graph.cpp.o [INFO] [stderr] -- Performing Test HAVE_GCC_O3__FFAST_MATH__FUNROLL_LOOPS - Success [INFO] [stderr] -- Performing Test HAVE_GCC_MSSE4.2__MARCH=NATIVE [INFO] [stderr] -- Performing Test HAVE_GCC_MSSE4.2__MARCH=NATIVE - Success [INFO] [stderr] -- Performing Test HAVE_CLANG_MSSE4.2__MARCH=NATIVE [INFO] [stderr] -- Performing Test HAVE_CLANG_MSSE4.2__MARCH=NATIVE - Success [INFO] [stderr] -- Performing Test HAVE_CXA_DEMANGLE [INFO] [stderr] [ 39%] Building CXX object CMakeFiles/libbf_static.dir/src/bloom_filter/stable.cpp.o [INFO] [stderr] [ 5%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/dfs.cpp.o [INFO] [stderr] [ 8%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/handle_graph.cpp.o [INFO] [stderr] [ 43%] Building CXX object CMakeFiles/libbf_shared.dir/src/counter_vector.cpp.o [INFO] [stderr] -- Performing Test HAVE_CXA_DEMANGLE - Success [INFO] [stderr] -- Compiler supports DEMANGLE. [INFO] [stderr] -- Performing Test HAVE_GCC_DHAVE_CXA_DEMANGLE [INFO] [stderr] [ 11%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/mutable_handle_graph.cpp.o [INFO] [stderr] [ 47%] Building CXX object CMakeFiles/libbf_shared.dir/src/hash.cpp.o [INFO] [stderr] -- Performing Test HAVE_GCC_DHAVE_CXA_DEMANGLE - Success [INFO] [stderr] -- Found Git: /usr/bin/git (found version "2.43.0") [INFO] [stderr] -- Performing Test HAVE_GCC_WALL [INFO] [stderr] [ 63%] Linking CXX executable argstest-multiple-inclusion [INFO] [stderr] [ 14%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o [INFO] [stderr] [ 52%] Building CXX object CMakeFiles/libbf_shared.dir/src/bloom_filter/a2.cpp.o [INFO] [stderr] [ 56%] Building CXX object CMakeFiles/libbf_shared.dir/src/bloom_filter/basic.cpp.o [INFO] [stderr] -- Performing Test HAVE_GCC_WALL - Success [INFO] [stderr] -- Performing Test HAVE_GCC_FOMIT_FRAME_POINTER [INFO] [stderr] [ 60%] Building CXX object CMakeFiles/libbf_shared.dir/src/bloom_filter/bitwise.cpp.o [INFO] [stderr] [ 63%] Built target argstest-multiple-inclusion [INFO] [stderr] [ 65%] Building CXX object CMakeFiles/libbf_shared.dir/src/bloom_filter/counting.cpp.o [INFO] [stderr] -- Performing Test HAVE_GCC_FOMIT_FRAME_POINTER - 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found [INFO] [stderr] -- Looking for stdlib.h [INFO] [stderr] [ 31%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/serializable.cpp.o [INFO] [stderr] [ 34%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/snarl_decomposition.cpp.o [INFO] [stderr] [ 37%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/trivially_serializable.cpp.o [INFO] [stderr] -- Looking for stdlib.h - found [INFO] [stderr] -- Looking for string.h [INFO] [stderr] [ 40%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/types.cpp.o [INFO] [stderr] -- Looking for string.h - found [INFO] [stderr] -- Looking for strings.h [INFO] [stderr] [ 78%] Linking CXX shared library lib/libbf.so [INFO] [stderr] [ 42%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/copy_graph.cpp.o [INFO] [stderr] [ 78%] Built target libbf_shared [INFO] [stderr] -- Looking for strings.h - found [INFO] [stderr] -- Looking for sys/types.h [INFO] [stderr] [ 82%] Building CXX object test/CMakeFiles/bf-test.dir/tests.cpp.o [INFO] [stderr] [ 45%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/append_graph.cpp.o [INFO] [stderr] [ 86%] Building CXX object test/bf/CMakeFiles/bf.dir/bf.cc.o [INFO] [stderr] [ 48%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/are_equivalent.cpp.o [INFO] [stderr] -- Looking for sys/types.h - found [INFO] [stderr] -- Performing Test HAVE_INLINE [INFO] [stderr] [ 51%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/find_tips.cpp.o [INFO] [stderr] [ 72%] Linking CXX executable gitlike [INFO] [stderr] [ 91%] Building CXX object test/bf/CMakeFiles/bf.dir/configuration.cc.o [INFO] [stderr] -- Performing Test HAVE_INLINE - Success [INFO] [stderr] -- Performing Test HAVE___INLINE [INFO] [stderr] [ 54%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/topological_sort.cpp.o [INFO] [stderr] [ 81%] Linking CXX executable argstest-windows-h [INFO] [stderr] [ 57%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/apply_orientations.cpp.o [INFO] [stderr] [ 81%] Built target argstest-windows-h [INFO] [stderr] -- Performing Test HAVE___INLINE - Success [INFO] [stderr] -- Performing Test HAVE___INLINE__ [INFO] [stderr] [ 60%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/is_single_stranded.cpp.o [INFO] [stderr] -- Performing Test HAVE___INLINE__ - Success [INFO] [stderr] -- Performing Test HAVE___DECLSPEC_DLLEXPORT_ [INFO] [stderr] -- Performing Test HAVE___DECLSPEC_DLLEXPORT_ - 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found [INFO] [stderr] -- Check size of int64_t [INFO] [stderr] [ 77%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/dijkstra.cpp.o [INFO] [stderr] -- Check size of int64_t - done [INFO] [stderr] -- Looking for PRId64 [INFO] [stderr] [ 80%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/is_acyclic.cpp.o [INFO] [stderr] [ 82%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/reverse_complement.cpp.o [INFO] [stderr] -- Looking for PRId64 - found [INFO] [stderr] -- Found PythonInterp: /usr/bin/python3 (found version "3.12.3") [INFO] [stderr] -- Performing Test CMAKE_HAVE_LIBC_PTHREAD [INFO] [stderr] [ 85%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/split_strands.cpp.o [INFO] [stderr] [ 88%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o [INFO] [stderr] -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success [INFO] [stderr] -- Found Threads: TRUE [INFO] [stderr] -- Looking for C++ include cstdio [INFO] [stderr] [ 91%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/weakly_connected_components.cpp.o [INFO] [stderr] [ 94%] Building CXX object CMakeFiles/handlegraph_objs.dir/src/extend.cpp.o [INFO] [stderr] -- Looking for C++ include cstdio - found [INFO] [stderr] -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) [INFO] [stderr] -- Configuring done (32.5s) [INFO] [stderr] -- Generating done (2.7s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build [INFO] [stderr] [ 57%] Performing build step for 'sdsl-lite' [INFO] [stderr] [ 0%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort64.dir/divsufsort.o [INFO] [stderr] [ 0%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort.dir/divsufsort.o [INFO] [stderr] [ 10%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort.dir/trsort.o [INFO] [stderr] [ 10%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort.dir/sssort.o [INFO] [stderr] [ 10%] Building CXX object external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o [INFO] [stderr] [ 10%] Building CXX object lib/CMakeFiles/sdsl.dir/bits.cpp.o [INFO] [stderr] [ 10%] Building CXX object lib/CMakeFiles/sdsl.dir/bp_support_algorithm.cpp.o [INFO] [stderr] [ 10%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort.dir/utils.o [INFO] [stderr] [ 20%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort64.dir/sssort.o [INFO] [stderr] [ 20%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_elias_delta.cpp.o [INFO] [stderr] [ 20%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort64.dir/trsort.o [INFO] [stderr] [ 20%] Building C object external/libdivsufsort/lib/CMakeFiles/divsufsort64.dir/utils.o [INFO] [stderr] [ 30%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_fibonacci.cpp.o [INFO] [stderr] [ 30%] Building CXX object lib/CMakeFiles/sdsl.dir/coder_elias_gamma.cpp.o [INFO] [stderr] [ 30%] Building CXX object lib/CMakeFiles/sdsl.dir/config.cpp.o [INFO] [stderr] [ 30%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_config.cpp.o [INFO] [stderr] [ 40%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_isa.cpp.o [INFO] [stderr] [ 40%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_lcp.cpp.o [INFO] [stderr] [ 40%] Linking C static library libdivsufsort.a [INFO] [stderr] [ 40%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_lcp_helper.cpp.o [INFO] [stderr] [ 40%] Built target divsufsort [INFO] [stderr] [ 40%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_sa.cpp.o [INFO] [stderr] [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/construct_sa_se.cpp.o [INFO] [stderr] [ 50%] Linking C static library libdivsufsort64.a [INFO] [stderr] [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/csa_alphabet_strategy.cpp.o [INFO] [stderr] [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/io.cpp.o [INFO] [stderr] [ 50%] Built target divsufsort64 [INFO] [stderr] [ 50%] Building CXX object lib/CMakeFiles/sdsl.dir/lcp_support_tree.cpp.o [INFO] [stderr] [ 60%] Building CXX object lib/CMakeFiles/sdsl.dir/louds_tree.cpp.o [INFO] [stderr] [ 60%] Building CXX object lib/CMakeFiles/sdsl.dir/memory_management.cpp.o [INFO] [stderr] [ 60%] Building CXX object lib/CMakeFiles/sdsl.dir/nn_dict_dynamic.cpp.o [INFO] [stderr] [ 95%] Linking CXX executable ../../bin/bf [INFO] [stderr] [ 95%] Built target bf [INFO] [stderr] [ 60%] Building CXX object lib/CMakeFiles/sdsl.dir/ram_filebuf.cpp.o [INFO] [stderr] [ 70%] Building CXX object lib/CMakeFiles/sdsl.dir/ram_fs.cpp.o [INFO] [stderr] [ 70%] Building CXX object lib/CMakeFiles/sdsl.dir/rrr_vector_15.cpp.o [INFO] [stderr] [ 70%] Building CXX object lib/CMakeFiles/sdsl.dir/sd_vector.cpp.o [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] fatal: not a git repository (or any parent up to mount point /opt/rustwide) [INFO] [stderr] Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set). [INFO] [stderr] diff: /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/include/odgi_git_version.hpp: No such file or directory [INFO] [stderr] CMake Warning: [INFO] [stderr] Manually-specified variables were not used by the project: [INFO] [stderr] [INFO] [stderr] BUILD_TESTS [INFO] [stderr] CMAKE_ASM_COMPILER [INFO] [stderr] CMAKE_ASM_FLAGS [INFO] [stderr] CMAKE_C_COMPILER [INFO] [stderr] ODGI_BUILD_DOCS [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at /usr/share/cmake-3.28/Modules/GNUInstallDirs.cmake:243 (message): [INFO] [stderr] Unable to determine default CMAKE_INSTALL_LIBDIR directory because no [INFO] [stderr] target architecture is known. Please enable at least one language before [INFO] [stderr] including GNUInstallDirs. [INFO] [stderr] Call Stack (most recent call first): [INFO] [stderr] CMakeLists.txt:5 (include) [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at CMakeLists.txt:3 (project): [INFO] [stderr] cmake_minimum_required() should be called prior to this top-level project() [INFO] [stderr] call. Please see the cmake-commands(7) manual for usage documentation of [INFO] [stderr] both commands. [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at CMakeLists.txt:22 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at /usr/share/cmake-3.28/Modules/GNUInstallDirs.cmake:243 (message): [INFO] [stderr] Unable to determine default CMAKE_INSTALL_LIBDIR directory because no [INFO] [stderr] target architecture is known. Please enable at least one language before [INFO] [stderr] including GNUInstallDirs. [INFO] [stderr] Call Stack (most recent call first): [INFO] [stderr] CMakeLists.txt:24 (include) [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at CMakeLists.txt:7 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] libhandlegraph is root project or external_project [INFO] [stderr] git found: /usr/bin/git [INFO] [stderr] CMake Deprecation Warning at external/libdivsufsort/CMakeLists.txt:2 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at external/libdivsufsort/CMakeLists.txt:7 (project): [INFO] [stderr] Policy CMP0048 is not set: project() command manages VERSION variables. [INFO] [stderr] Run "cmake --help-policy CMP0048" for policy details. Use the cmake_policy [INFO] [stderr] command to set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] The following variable(s) would be set to empty: [INFO] [stderr] [INFO] [stderr] PROJECT_VERSION [INFO] [stderr] PROJECT_VERSION_MAJOR [INFO] [stderr] PROJECT_VERSION_MINOR [INFO] [stderr] PROJECT_VERSION_PATCH [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at external/googletest/googletest/CMakeLists.txt:47 (project): [INFO] [stderr] Policy CMP0048 is not set: project() command manages VERSION variables. [INFO] [stderr] Run "cmake --help-policy CMP0048" for policy details. Use the cmake_policy [INFO] [stderr] command to set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] The following variable(s) would be set to empty: [INFO] [stderr] [INFO] [stderr] PROJECT_VERSION [INFO] [stderr] PROJECT_VERSION_MAJOR [INFO] [stderr] PROJECT_VERSION_MINOR [INFO] [stderr] PROJECT_VERSION_PATCH [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at external/googletest/googletest/CMakeLists.txt:48 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at external/googletest/googletest/cmake/internal_utils.cmake:211 (find_package): [INFO] [stderr] Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules [INFO] [stderr] are removed. Run "cmake --help-policy CMP0148" for policy details. Use [INFO] [stderr] the cmake_policy command to set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] Call Stack (most recent call first): [INFO] [stderr] external/googletest/googletest/CMakeLists.txt:60 (include) [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [CMakeFiles/argstest.dir/build.make:76: CMakeFiles/argstest.dir/test.cxx.o] Error 1 [INFO] [stderr] gmake[4]: *** [CMakeFiles/Makefile2:143: CMakeFiles/argstest.dir/all] Error 2 [INFO] [stderr] gmake[3]: *** [Makefile:166: all] Error 2 [INFO] [stderr] gmake[2]: *** [CMakeFiles/tayweeargs.dir/build.make:86: tayweeargs-prefix/src/tayweeargs-stamp/tayweeargs-build] Error 2 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:341: CMakeFiles/tayweeargs.dir/all] Error 2 [INFO] [stderr] gmake[1]: *** Waiting for unfinished jobs.... [INFO] [stderr] In file included from /usr/include/c++/13/string:54, [INFO] [stderr] from /usr/include/c++/13/bits/locale_classes.h:40, [INFO] [stderr] from /usr/include/c++/13/bits/ios_base.h:41, [INFO] [stderr] from /usr/include/c++/13/ios:44, [INFO] [stderr] from /usr/include/c++/13/istream:40, [INFO] [stderr] from /usr/include/c++/13/fstream:40, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:2: [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:36:12: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: using a dangling pointer to an unnamed temporary [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:36:12: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:49:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:49:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:59:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:59:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:69:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:69:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:89:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:89:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:96:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:96:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: dangling pointer to an unnamed temporary may be used [-Wdangling-pointer=] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: unnamed temporary defined here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size_type std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::size() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3730:24, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:36:12: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:1072:16: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_string_length' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 1072 | { return _M_string_length; } [INFO] [stderr] | ^~~~~~~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:36:12: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_dataplus.std::__cxx11::basic_string::_Alloc_hider::_M_p' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:49:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_dataplus.std::__cxx11::basic_string::_Alloc_hider::_M_p' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:59:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_dataplus.std::__cxx11::basic_string::_Alloc_hider::_M_p' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:89:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_dataplus.std::__cxx11::basic_string::_Alloc_hider::_M_p' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] In member function 'std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::pointer std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::_M_data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]', [INFO] [stderr] inlined from 'const _CharT* std::__cxx11::basic_string<_CharT, _Traits, _Alloc>::data() const [with _CharT = char; _Traits = std::char_traits; _Alloc = std::allocator]' at /usr/include/c++/13/bits/basic_string.h:2609:23, [INFO] [stderr] inlined from 'bool std::operator==(const __cxx11::basic_string<_CharT, _Traits, _Alloc>&, const _CharT*) [with _CharT = char; _Traits = char_traits; _Alloc = allocator]' at /usr/include/c++/13/bits/basic_string.h:3731:29, [INFO] [stderr] inlined from 'util::trial run(const config&)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:96:19: [INFO] [stderr] /usr/include/c++/13/bits/basic_string.h:223:28: warning: '.util::trial, std::allocator > >::.util::trial, std::allocator > >::._anon_92::value_.std::__cxx11::basic_string::_M_dataplus.std::__cxx11::basic_string::_Alloc_hider::_M_p' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 223 | { return _M_dataplus._M_p; } [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc: In function 'util::trial run(const config&)': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/libbf/test/bf/bf.cc:33:42: note: '' declared here [INFO] [stderr] 33 | auto const& type = *cfg.as("type"); [INFO] [stderr] | ~~~~~~~~~~~~~~~~~~~^~~~~~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [test/CMakeFiles/bf-test.dir/build.make:76: test/CMakeFiles/bf-test.dir/tests.cpp.o] Error 1 [INFO] [stderr] gmake[4]: *** [CMakeFiles/Makefile2:954: test/CMakeFiles/bf-test.dir/all] Error 2 [INFO] [stderr] gmake[4]: *** Waiting for unfinished jobs.... [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:24, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/coder_elias_gamma.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_fibonacci.hpp:24, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/coder_fibonacci.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:24: [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)', [INFO] [stderr] inlined from 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:531:17, [INFO] [stderr] inlined from 'sdsl::coder::elias_gamma::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:85:62: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:537:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 537 | if (0!=(w=*(++word))) [INFO] [stderr] | ~~^~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp: In constructor 'sdsl::coder::elias_gamma::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:80:35: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 80 | for (uint64_t x=0; x < (1<<8); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_gamma::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:93:60: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp: In constructor 'sdsl::coder::elias_gamma::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:80:35: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 80 | for (uint64_t x=0; x < (1<<8); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)', [INFO] [stderr] inlined from 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:531:17, [INFO] [stderr] inlined from 'sdsl::coder::elias_gamma::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:56:58: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:537:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 537 | if (0!=(w=*(++word))) [INFO] [stderr] | ~~^~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp: In constructor 'sdsl::coder::elias_gamma::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:51:31: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 51 | for (uint64_t x=0; x < (1<<16); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_gamma::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:64:56: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp: In constructor 'sdsl::coder::elias_gamma::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_gamma.hpp:51:31: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 51 | for (uint64_t x=0; x < (1<<16); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [CMakeFiles/handlegraph_objs.dir/build.make:132: CMakeFiles/handlegraph_objs.dir/src/path_metadata.cpp.o] Error 1 [INFO] [stderr] gmake[5]: *** Waiting for unfinished jobs.... [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/construct_isa.hpp:24, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/construct_isa.cpp:4: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:24, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/coder_elias_delta.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bp_support_algorithm.hpp:24, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/bp_support_algorithm.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:24: [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)', [INFO] [stderr] inlined from 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:531:17, [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:87:66: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:537:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 537 | if (0!=(w=*(++word))) [INFO] [stderr] | ~~^~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:82:35: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 82 | for (uint64_t x=0; x < (1<<8); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:94:53: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:82:35: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 82 | for (uint64_t x=0; x < (1<<8); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:97:60: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:82:35: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 82 | for (uint64_t x=0; x < (1<<8); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)', [INFO] [stderr] inlined from 'static uint64_t sdsl::bits::read_unary(const uint64_t*, uint8_t)' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:531:17, [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:56:62: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:537:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 537 | if (0!=(w=*(++word))) [INFO] [stderr] | ~~^~~~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:51:31: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 51 | for (uint64_t x=0; x < (1<<16); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:63:49: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:51:31: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 51 | for (uint64_t x=0; x < (1<<16); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In static member function 'static uint64_t sdsl::bits::read_int(const uint64_t*, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'sdsl::coder::elias_delta::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:66:56: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:506:18: warning: array subscript 1 is outside array bounds of 'uint64_t [1]' {aka 'long unsigned int [1]'} [-Warray-bounds=] [INFO] [stderr] 506 | ((*(word+1) & bits::lo_set[(offset+len)&0x3F]) // set higher bits zero [INFO] [stderr] | ^~~~~~~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp: In constructor 'sdsl::coder::elias_delta::impl::impl()': [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/coder_elias_delta.hpp:51:31: note: at offset 8 into object 'x' of size 8 [INFO] [stderr] 51 | for (uint64_t x=0; x < (1<<16); ++x) { [INFO] [stderr] | ^ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/construct_lcp.hpp:26, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/construct_lcp.cpp:6: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] gmake[3]: *** [Makefile:146: all] Error 2 [INFO] [stderr] gmake[2]: *** [CMakeFiles/libbf-EXT.dir/build.make:86: libbf-EXT-prefix/src/libbf-EXT-stamp/libbf-EXT-build] Error 2 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:159: CMakeFiles/libbf-EXT.dir/all] Error 2 [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/construct_sa.hpp:26, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/construct_sa.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [CMakeFiles/handlegraph_objs.dir/build.make:496: CMakeFiles/handlegraph_objs.dir/src/chop.cpp.o] Error 1 [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:24: [INFO] [stderr] In static member function 'static void sdsl::bits::write_int(uint64_t*, uint64_t, uint8_t, uint8_t)', [INFO] [stderr] inlined from 'static void sdsl::memory_manager::resize(t_vec&, typename t_vec::size_type) [with t_vec = sdsl::int_vector<0>]' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/memory_management.hpp:364:36, [INFO] [stderr] inlined from 'void sdsl::int_vector< >::bit_resize(size_type) [with unsigned char t_width = 0]' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1327:27, [INFO] [stderr] inlined from 'void sdsl::int_vector< >::resize(size_type) [with unsigned char t_width = 0]' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:379:23, [INFO] [stderr] inlined from 'sdsl::int_vector< >::int_vector(size_type, value_type, uint8_t) [with unsigned char t_width = 0]' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1254:11, [INFO] [stderr] inlined from 'sdsl::excess::impl::impl()' at /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bp_support_algorithm.hpp:114:46: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/bits.hpp:460:9: warning: '*temp' may be used uninitialized [-Wmaybe-uninitialized] [INFO] [stderr] 460 | *word &= [INFO] [stderr] | ^~~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/construct_sa_se.hpp:5, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/construct_sa_se.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [CMakeFiles/handlegraph_objs.dir/build.make:398: CMakeFiles/handlegraph_objs.dir/src/dagify.cpp.o] Error 1 [INFO] [stderr] gmake[4]: *** [CMakeFiles/Makefile2:87: CMakeFiles/handlegraph_objs.dir/all] Error 2 [INFO] [stderr] gmake[3]: *** [Makefile:136: all] Error 2 [INFO] [stderr] gmake[2]: *** [CMakeFiles/handlegraph.dir/build.make:86: handlegraph-prefix/src/handlegraph-stamp/handlegraph-build] Error 2 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:315: CMakeFiles/handlegraph.dir/all] Error 2 [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/construct_lcp_helper.hpp:4, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/construct_lcp_helper.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/lcp.hpp:26, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/lcp_support_tree.hpp:4, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/lcp_support_tree.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/louds_tree.hpp:11, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/louds_tree.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [external/googletest/googletest/CMakeFiles/gtest.dir/build.make:76: external/googletest/googletest/CMakeFiles/gtest.dir/src/gtest-all.cc.o] Error 1 [INFO] [stderr] gmake[4]: *** [CMakeFiles/Makefile2:579: external/googletest/googletest/CMakeFiles/gtest.dir/all] Error 2 [INFO] [stderr] gmake[4]: *** Waiting for unfinished jobs.... [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[5]: *** [lib/CMakeFiles/sdsl.dir/build.make:174: lib/CMakeFiles/sdsl.dir/construct_isa.cpp.o] Error 1 [INFO] [stderr] gmake[5]: *** Waiting for unfinished jobs.... [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/nn_dict_dynamic.hpp:25, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/nn_dict_dynamic.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/csa_alphabet_strategy.hpp:50, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/csa_alphabet_strategy.cpp:17: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/rrr_vector_15.hpp:25, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/rrr_vector_15.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] In file included from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/sd_vector.hpp:26, [INFO] [stderr] from /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/odgi-source-for-build/deps/sdsl-lite/lib/sd_vector.cpp:1: [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1402:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1402 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1410:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1410 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1418:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1418 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1426:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1426 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1434:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1434 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] /opt/rustwide/target/debug/build/odgi-ffi-da6f457dbe7cac91/out/build/sdsl-lite-prefix/src/sdsl-lite-build/lib/../include/sdsl/int_vector.hpp:1442:8: warning: type qualifiers ignored on function return type [-Wignored-qualifiers] [INFO] [stderr] 1442 | inline auto [INFO] [stderr] | ^~~~ [INFO] [stderr] gmake[4]: *** [CMakeFiles/Makefile2:631: lib/CMakeFiles/sdsl.dir/all] Error 2 [INFO] [stderr] gmake[3]: *** [Makefile:156: all] Error 2 [INFO] [stderr] gmake[2]: *** [CMakeFiles/sdsl-lite.dir/build.make:86: sdsl-lite-prefix/src/sdsl-lite-stamp/sdsl-lite-build] Error 2 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:211: CMakeFiles/sdsl-lite.dir/all] Error 2 [INFO] [stderr] gmake: *** [Makefile:146: all] Error 2 [INFO] [stderr] [INFO] [stderr] thread 'main' (489) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.54/src/lib.rs:1119:5: [INFO] [stderr] [INFO] [stderr] command did not execute successfully, got: exit status: 2 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5a3e6a7edd62 - std::backtrace_rs::backtrace::libunwind::trace::h9ea1e07ac77a25d7 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x5a3e6a7edd62 - std::backtrace_rs::backtrace::trace_unsynchronized::h72b75eb83b53d15a [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x5a3e6a7edd62 - std::sys::backtrace::_print_fmt::h255777b7ec902439 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:66:9 [INFO] [stderr] 3: 0x5a3e6a7edd62 - ::fmt::h8a1ac49fcd7ee8ce [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:39:26 [INFO] [stderr] 4: 0x5a3e6a7fed8f - core::fmt::rt::Argument::fmt::h635cbf3c6754cc90 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/rt.rs:173:76 [INFO] [stderr] 5: 0x5a3e6a7fed8f - core::fmt::write::hbdcc0ec4f1bab1db [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/mod.rs:1469:25 [INFO] [stderr] 6: 0x5a3e6a7bbda3 - std::io::default_write_fmt::hb29d13affe7e9cd0 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x5a3e6a7bbda3 - std::io::Write::write_fmt::hec441b8c6eca32b9 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:1954:13 [INFO] [stderr] 8: 0x5a3e6a7c7b42 - std::sys::backtrace::BacktraceLock::print::h052febbd86f7bf07 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:42:9 [INFO] [stderr] 9: 0x5a3e6a7caddf - std::panicking::default_hook::{{closure}}::h66aeee20dd470abb [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:301:27 [INFO] [stderr] 10: 0x5a3e6a7cac39 - std::panicking::default_hook::h9d66b9642014ce48 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:328:9 [INFO] [stderr] 11: 0x5a3e6a7cb465 - std::panicking::panic_with_hook::h6d5921a1a1fa5a8e [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:834:13 [INFO] [stderr] 12: 0x5a3e6a7cb24a - std::panicking::panic_handler::{{closure}}::hafeef6f707d43542 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:707:13 [INFO] [stderr] 13: 0x5a3e6a7c7c79 - std::sys::backtrace::__rust_end_short_backtrace::h08cbc3319a3d0120 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:174:18 [INFO] [stderr] 14: 0x5a3e6a7af1ed - __rustc[ce5c411ff86ab1b2]::rust_begin_unwind [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:698:5 [INFO] [stderr] 15: 0x5a3e6a803060 - core::panicking::panic_fmt::h774fb860369a0f7b [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:80:14 [INFO] [stderr] 16: 0x5a3e6a73486b - cmake::fail::hf27ea88f71a5a082 [INFO] [stderr] 17: 0x5a3e6a7344f2 - cmake::run::h47543a1a59bbc168 [INFO] [stderr] 18: 0x5a3e6a73a6d4 - cmake::Config::build::h1ced0b3b7e4026ef [INFO] [stderr] 19: 0x5a3e6a4bd86c - build_script_build::main::hb0f4bd9ba2111144 [INFO] [stderr] 20: 0x5a3e6a4bef03 - core::ops::function::FnOnce::call_once::h0113533394c316c0 [INFO] [stderr] 21: 0x5a3e6a4be8d6 - std::sys::backtrace::__rust_begin_short_backtrace::h713e1ae46a2ef2ac [INFO] [stderr] 22: 0x5a3e6a4be859 - std::rt::lang_start::{{closure}}::h29fa7180c3f1c491 [INFO] [stderr] 23: 0x5a3e6a7bd7d0 - core::ops::function::impls:: for &F>::call_once::h9095abc9db71b07e [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:287:21 [INFO] [stderr] 24: 0x5a3e6a7bd7d0 - std::panicking::catch_unwind::do_call::h6cf5dc461761418c [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stderr] 25: 0x5a3e6a7bd7d0 - std::panicking::catch_unwind::h60074fd2327f40bd [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stderr] 26: 0x5a3e6a7bd7d0 - std::panic::catch_unwind::heb14fa8e39d051cf [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stderr] 27: 0x5a3e6a7bd7d0 - std::rt::lang_start_internal::{{closure}}::hfb550bec36306a19 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/rt.rs:175:24 [INFO] [stderr] 28: 0x5a3e6a7bd7d0 - std::panicking::catch_unwind::do_call::hc805f36f35b6d647 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stderr] 29: 0x5a3e6a7bd7d0 - std::panicking::catch_unwind::hb8d32f0195463ad2 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stderr] 30: 0x5a3e6a7bd7d0 - std::panic::catch_unwind::hcebe3b1d5adfc5a2 [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stderr] 31: 0x5a3e6a7bd7d0 - std::rt::lang_start_internal::h27f55ed238aa26df [INFO] [stderr] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/rt.rs:171:5 [INFO] [stderr] 32: 0x5a3e6a4be841 - std::rt::lang_start::h6bb1fcf9501f12f3 [INFO] [stderr] 33: 0x5a3e6a4c7235 - main [INFO] [stderr] 34: 0x7e9e96cab1ca - [INFO] [stderr] 35: 0x7e9e96cab28b - __libc_start_main [INFO] [stderr] 36: 0x5a3e6a4bd1b5 - _start [INFO] [stderr] 37: 0x0 - [INFO] running `Command { std: "docker" "inspect" "4fe8c85bee5094c527e566f9917f6c46eb1309b9667574628a995c0b058f6f8d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4fe8c85bee5094c527e566f9917f6c46eb1309b9667574628a995c0b058f6f8d", kill_on_drop: false }` [INFO] [stdout] 4fe8c85bee5094c527e566f9917f6c46eb1309b9667574628a995c0b058f6f8d