[INFO] fetching crate ska 0.5.0... [INFO] testing ska-0.5.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-8 [INFO] extracting crate ska 0.5.0 into /workspace/builds/worker-1-tc1/source [INFO] started tweaking crates.io crate ska 0.5.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate ska 0.5.0 [INFO] tweaked toml for crates.io crate ska 0.5.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate ska 0.5.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate ska 0.5.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded snapbox-macros v0.3.10 [INFO] [stderr] Downloaded snapbox v0.4.17 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded seq_io v0.3.4 [INFO] [stderr] Downloaded normalize-line-endings v0.3.0 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded predicates v2.1.5 [INFO] [stderr] Downloaded assert_fs v1.1.3 [INFO] [stderr] Downloaded argmin-math v0.3.0 [INFO] [stderr] Downloaded slog-async v2.8.0 [INFO] [stderr] Downloaded slog-json v2.6.1 [INFO] [stderr] Downloaded noodles-bgzf v0.26.0 [INFO] [stderr] Downloaded argmin v0.9.0 [INFO] [stderr] Downloaded indicatif v0.17.11 [INFO] [stderr] Downloaded noodles-vcf v0.49.0 [INFO] [stderr] Downloaded flate2 v1.1.4 [INFO] [stderr] Downloaded noodles-core v0.14.0 [INFO] [stderr] Downloaded pretty_assertions v1.4.1 [INFO] [stderr] Downloaded noodles-csi v0.30.0 [INFO] [stderr] Downloaded term v1.2.0 [INFO] [stderr] Downloaded globwalk v0.9.1 [INFO] [stderr] Downloaded slog v2.8.2 [INFO] [stderr] Downloaded slog-term v2.9.2 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded diff v0.1.13 [INFO] [stderr] Downloaded noodles-tabix v0.36.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ecff440478425ceef3d96603c3ec9a26bc1c43ecf4a9ac95e6a4fd4b19dc405f [INFO] running `Command { std: "docker" "start" "-a" "ecff440478425ceef3d96603c3ec9a26bc1c43ecf4a9ac95e6a4fd4b19dc405f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ecff440478425ceef3d96603c3ec9a26bc1c43ecf4a9ac95e6a4fd4b19dc405f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ecff440478425ceef3d96603c3ec9a26bc1c43ecf4a9ac95e6a4fd4b19dc405f", kill_on_drop: false }` [INFO] [stdout] ecff440478425ceef3d96603c3ec9a26bc1c43ecf4a9ac95e6a4fd4b19dc405f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] be15398e6eb13c563f95ca5f74df7c2f5396223165cd4e1f4075dc85bb3355c4 [INFO] running `Command { std: "docker" "start" "-a" "be15398e6eb13c563f95ca5f74df7c2f5396223165cd4e1f4075dc85bb3355c4", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling unicode-ident v1.0.19 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling cc v1.2.41 [INFO] [stderr] Compiling simd-adler32 v0.3.7 [INFO] [stderr] Compiling time-core v0.1.6 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling slog v2.8.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling deranged v0.5.4 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling indexmap v2.11.4 [INFO] [stderr] Compiling time-macros v0.2.24 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling proc-macro2 v1.0.101 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling thread_local v1.1.9 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling slog-async v2.8.0 [INFO] [stderr] Compiling noodles-core v0.14.0 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.1 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling portable-atomic v1.11.1 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling anstyle v1.0.13 [INFO] [stderr] Compiling is-terminal v0.4.16 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling flate2 v1.1.4 [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling take_mut v0.2.2 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling strsim v0.11.1 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling term v1.2.0 [INFO] [stderr] Compiling regex-syntax v0.8.8 [INFO] [stderr] Compiling ciborium-io v0.2.2 [INFO] [stderr] Compiling noodles-bgzf v0.26.0 [INFO] [stderr] Compiling unicode-width v0.2.2 [INFO] [stderr] Compiling clap_lex v0.7.6 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling clap_builder v4.5.49 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling time v0.3.44 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling instant v0.1.13 [INFO] [stderr] Compiling noodles-csi v0.30.0 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling noodles-tabix v0.36.0 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling serde_json v1.0.145 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling noodles-vcf v0.49.0 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling zerocopy-derive v0.8.27 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling clap_derive v4.5.49 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling zerocopy v0.8.27 [INFO] [stderr] Compiling clap v4.5.49 [INFO] [stderr] Compiling erased-serde v0.3.31 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling seq_io v0.3.4 [INFO] [stderr] Compiling rand_xoshiro v0.6.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling half v2.7.1 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling ciborium-ll v0.2.2 [INFO] [stderr] Compiling slog-term v2.9.2 [INFO] [stderr] Compiling slog-json v2.6.1 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling argmin-math v0.3.0 [INFO] [stderr] Compiling argmin v0.9.0 [INFO] [stderr] Compiling ska v0.5.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 48.62s [INFO] running `Command { std: "docker" "inspect" "be15398e6eb13c563f95ca5f74df7c2f5396223165cd4e1f4075dc85bb3355c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "be15398e6eb13c563f95ca5f74df7c2f5396223165cd4e1f4075dc85bb3355c4", kill_on_drop: false }` [INFO] [stdout] be15398e6eb13c563f95ca5f74df7c2f5396223165cd4e1f4075dc85bb3355c4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c438bb453b0fb0ac34c85b36ba06f2b1072d8808d95359ef591a1f8ee46f5be2 [INFO] running `Command { std: "docker" "start" "-a" "c438bb453b0fb0ac34c85b36ba06f2b1072d8808d95359ef591a1f8ee46f5be2", kill_on_drop: false }` [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling bitflags v2.9.4 [INFO] [stderr] Compiling predicates-core v1.0.9 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling difflib v0.4.0 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling termtree v0.5.1 [INFO] [stderr] Compiling normalize-line-endings v0.3.0 [INFO] [stderr] Compiling snapbox-macros v0.3.10 [INFO] [stderr] Compiling float-cmp v0.9.0 [INFO] [stderr] Compiling similar v2.7.0 [INFO] [stderr] Compiling diff v0.1.13 [INFO] [stderr] Compiling yansi v1.0.1 [INFO] [stderr] Compiling rustix v1.1.2 [INFO] [stderr] Compiling predicates-tree v1.0.12 [INFO] [stderr] Compiling predicates v3.1.3 [INFO] [stderr] Compiling snapbox v0.4.17 [INFO] [stderr] Compiling pretty_assertions v1.4.1 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling tempfile v3.23.0 [INFO] [stderr] Compiling globset v0.4.16 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling ignore v0.4.23 [INFO] [stderr] Compiling predicates v2.1.5 [INFO] [stderr] Compiling ska v0.5.0 (/opt/rustwide/workdir) [INFO] [stderr] Compiling globwalk v0.9.1 [INFO] [stderr] Compiling assert_fs v1.1.3 [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 20.75s [INFO] running `Command { std: "docker" "inspect" "c438bb453b0fb0ac34c85b36ba06f2b1072d8808d95359ef591a1f8ee46f5be2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c438bb453b0fb0ac34c85b36ba06f2b1072d8808d95359ef591a1f8ee46f5be2", kill_on_drop: false }` [INFO] [stdout] c438bb453b0fb0ac34c85b36ba06f2b1072d8808d95359ef591a1f8ee46f5be2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7e35a5a351b28908e336a1516a5b38fdf5de7c02038748b3bf2219b7470a45e3 [INFO] running `Command { std: "docker" "start" "-a" "7e35a5a351b28908e336a1516a5b38fdf5de7c02038748b3bf2219b7470a45e3", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/ska-f78ed0a7fa215b13) [INFO] [stdout] [INFO] [stdout] running 12 tests [INFO] [stdout] test merge_ska_array::tests::test_kmer_iterator ... ok [INFO] [stdout] test ska_dict::bit_encoding::tests::test_base_to_prob ... ok [INFO] [stdout] test merge_ska_array::tests::test_update_counts ... ok [INFO] [stdout] test merge_ska_array::tests::test_delete_samples_normal ... ok [INFO] [stdout] test ska_dict::tests::test_add_palindrome_to_dict ... ok [INFO] [stdout] test coverage::tests::test_fit_histogram ... ok [INFO] [stdout] test coverage::tests::print_before_fit - should panic ... ok [INFO] [stdout] test merge_ska_array::tests::test_delete_samples_empty_or_all - should panic ... ok [INFO] [stdout] test coverage::tests::double_fit - should panic ... ok [INFO] [stdout] test merge_ska_array::tests::test_delete_samples_non_existent - should panic ... ok [INFO] [stdout] test ska_dict::tests::test_panic_add_palindrome_to_dict - should panic ... ok [INFO] [stdout] test ska_dict::tests::test_panic2_add_palindrome_to_dict - should panic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.09s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/ska-2f828bbb2a14bebe) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/align.rs (/opt/rustwide/target/debug/deps/align-576875d45c3cefd3) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test build_cli ... ok [INFO] [stdout] test align_cli ... ok [INFO] [stdout] test build_and_align ... ok [INFO] [stdout] test long_kmers ... ok [INFO] [stdout] test basic_align ... ok [INFO] [stdout] test build_proportion_reads ... ok [INFO] [stdout] test filters ... ok [INFO] [stdout] test parallel_align ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.15s [INFO] [stdout] [INFO] [stderr] Running tests/distance.rs (/opt/rustwide/target/debug/deps/distance-510ec8c01086774c) [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test dist_filter ... ok [INFO] [stdout] test basic_dists ... ok [INFO] [stderr] Running tests/fasta_input.rs (/opt/rustwide/target/debug/deps/fasta_input-b43cf2e40ac44713) [INFO] [stdout] test multisample_dists ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test align_n ... ok [INFO] [stdout] test map_n ... ok [INFO] [stdout] test repeats ... ok [INFO] [stdout] test palindromes ... ok [INFO] [stdout] test rev_comp ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.08s [INFO] [stdout] [INFO] [stderr] Running tests/fastq_input.rs (/opt/rustwide/target/debug/deps/fastq_input-2756d149d9933af9) [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test build_auto_check ... ok [INFO] [stdout] test cov_check ... ok [INFO] [stdout] test align_fastq ... ok [INFO] [stdout] test map_fastq ... ok [INFO] [stdout] test count_check ... ok [INFO] [stdout] test count_check_long ... ok [INFO] [stdout] test error_fastq ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.05s [INFO] [stdout] [INFO] [stderr] Running tests/map.rs (/opt/rustwide/target/debug/deps/map-f5715cce0c2c73d8) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test map_u128 ... ok [INFO] [stdout] test repeat_mask ... ok [INFO] [stdout] test map_vcf ... ok [INFO] [stdout] test map_aln ... ok [INFO] [stdout] test map_rev_comp ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.14s [INFO] [stdout] [INFO] [stderr] Running tests/skalo.rs (/opt/rustwide/target/debug/deps/skalo-f9e1078b925f411b) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test ska_lo ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] [stderr] Running tests/skf_ops.rs (/opt/rustwide/target/debug/deps/skf_ops-6253302ed1a91417) [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test merge_delete_u128 ... ok [INFO] [stdout] test weed ... ok [INFO] [stdout] test merge_delete ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.14s [INFO] [stdout] [INFO] [stderr] Doc-tests ska [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test src/ska_dict/bit_encoding.rs - ska_dict::bit_encoding::IUPAC (line 373) ... ok [INFO] [stdout] test src/ska_ref.rs - ska_ref (line 12) ... ok [INFO] [stdout] test src/lib.rs - (line 415) ... ok [INFO] [stdout] test src/merge_ska_array.rs - merge_ska_array::MergeSkaArray (line 42) ... ok [INFO] [stdout] test src/ska_dict.rs - ska_dict::SkaDict::new (line 172) ... ok [INFO] [stdout] test src/lib.rs - (line 386) ... FAILED [INFO] [stdout] test src/merge_ska_dict.rs - merge_ska_dict::build_and_merge (line 331) ... ok [INFO] [stdout] test src/ska_dict.rs - ska_dict::SkaDict::new (line 185) ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/lib.rs - (line 386) stdout ---- [INFO] [stdout] Test executable failed (exit status: 101). [INFO] [stdout] [INFO] [stdout] stderr: [INFO] [stdout] [INFO] [stdout] thread 'main' (947) panicked at src/lib.rs:29:6: [INFO] [stdout] Failed to save output file: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x621039d55e52 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x621039d55e52 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x621039d55e52 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x621039d55e52 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x621039d670df - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x621039d670df - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x621039d2d513 - std::io::default_write_fmt::hdc5d19b6df666f61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x621039d2d513 - std::io::Write::write_fmt::h3ab9f1f4d8d19b72 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x621039d34ea2 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x621039d393cf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x621039d39229 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:328:9 [INFO] [stdout] 11: 0x621039d39a55 - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:834:13 [INFO] [stdout] 12: 0x621039d3983a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 13: 0x621039d34fe9 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 14: 0x621039d21f2d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 15: 0x621039d6ee60 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 16: 0x621039d6e3d6 - core::result::unwrap_failed::h427ee4a8bb06d8af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1862:5 [INFO] [stdout] 17: 0x621039c075ab - core::result::Result::expect::h2cfcd0566451ca27 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1185:23 [INFO] [stdout] 18: 0x621039c059ae - rust_out::main::_doctest_main_src_lib_rs_386_0::h12138b1bfd530691 [INFO] [stdout] 19: 0x621039c05546 - rust_out::main::hbdf05be24bd65ee6 [INFO] [stdout] 20: 0x621039c05103 - core::ops::function::FnOnce::call_once::h1e8c751e4a62d14e [INFO] [stdout] 21: 0x621039c050e6 - std::sys::backtrace::__rust_begin_short_backtrace::h6f205b09ee900b2a [INFO] [stdout] 22: 0x621039c050c9 - std::rt::lang_start::{{closure}}::h374dad1e7f5efc95 [INFO] [stdout] 23: 0x621039d2ee50 - core::ops::function::impls:: for &F>::call_once::h8434f550918e723f [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:287:21 [INFO] [stdout] 24: 0x621039d2ee50 - std::panicking::catch_unwind::do_call::h7f7a838f33db43be [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 25: 0x621039d2ee50 - std::panicking::catch_unwind::hf345702047129f6d [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 26: 0x621039d2ee50 - std::panic::catch_unwind::h42f92c278294a3a0 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 27: 0x621039d2ee50 - std::rt::lang_start_internal::{{closure}}::ha6834eab5ce60f45 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/rt.rs:175:24 [INFO] [stdout] 28: 0x621039d2ee50 - std::panicking::catch_unwind::do_call::hf4afda32c60c9e55 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x621039d2ee50 - std::panicking::catch_unwind::hbfda5503aab4db1e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x621039d2ee50 - std::panic::catch_unwind::h1a1ed11560d244f4 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x621039d2ee50 - std::rt::lang_start_internal::h1f713c0146d469ad [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/rt.rs:171:5 [INFO] [stdout] 32: 0x621039c050b1 - std::rt::lang_start::h25a068bab729a087 [INFO] [stdout] 33: 0x621039c05a25 - main [INFO] [stdout] 34: 0x75efe916f1ca - [INFO] [stdout] 35: 0x75efe916f28b - __libc_start_main [INFO] [stdout] 36: 0x621039c04fc5 - _start [INFO] [stdout] 37: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/lib.rs - (line 386) [INFO] [stdout] [INFO] [stdout] test result: FAILED. 7 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.60s [INFO] [stdout] [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] running `Command { std: "docker" "inspect" "7e35a5a351b28908e336a1516a5b38fdf5de7c02038748b3bf2219b7470a45e3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7e35a5a351b28908e336a1516a5b38fdf5de7c02038748b3bf2219b7470a45e3", kill_on_drop: false }` [INFO] [stdout] 7e35a5a351b28908e336a1516a5b38fdf5de7c02038748b3bf2219b7470a45e3