[INFO] fetching crate ontolius 0.7.0...
[INFO] testing ontolius-0.7.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-8
[INFO] extracting crate ontolius 0.7.0 into /workspace/builds/worker-1-tc1/source
[INFO] started tweaking crates.io crate ontolius 0.7.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate ontolius 0.7.0
[INFO] tweaked toml for crates.io crate ontolius 0.7.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate ontolius 0.7.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate ontolius 0.7.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded indoc v2.0.7
[INFO] [stderr]   Downloaded delegate v0.8.0
[INFO] [stderr]   Downloaded pyo3-build-config v0.24.2
[INFO] [stderr]   Downloaded unindent v0.2.4
[INFO] [stderr]   Downloaded target-lexicon v0.13.3
[INFO] [stderr]   Downloaded louds-rs v0.4.0
[INFO] [stderr]   Downloaded pyo3-macros v0.24.2
[INFO] [stderr]   Downloaded pyo3-ffi v0.24.2
[INFO] [stderr]   Downloaded fid-rs v0.1.1
[INFO] [stderr]   Downloaded fast-float v0.2.0
[INFO] [stderr]   Downloaded graph_builder v0.3.1
[INFO] [stderr]   Downloaded linereader v0.4.0
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.24.2
[INFO] [stderr]   Downloaded curieosa v0.1.0
[INFO] [stderr]   Downloaded atomic v0.5.3
[INFO] [stderr]   Downloaded page_size v0.4.2
[INFO] [stderr]   Downloaded trie-rs v0.1.1
[INFO] [stderr]   Downloaded pyo3 v0.24.2
[INFO] [stderr]   Downloaded obographs-dev v0.2.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e91027fe92851d0e18ef51c5c4927502f7a3041c6cecc8db3e6ec08e305c9c4a
[INFO] running `Command { std: "docker" "start" "-a" "e91027fe92851d0e18ef51c5c4927502f7a3041c6cecc8db3e6ec08e305c9c4a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e91027fe92851d0e18ef51c5c4927502f7a3041c6cecc8db3e6ec08e305c9c4a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e91027fe92851d0e18ef51c5c4927502f7a3041c6cecc8db3e6ec08e305c9c4a", kill_on_drop: false }`
[INFO] [stdout] e91027fe92851d0e18ef51c5c4927502f7a3041c6cecc8db3e6ec08e305c9c4a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a7e685adc824cba4c27e856626f4b26a8ea4e6d6f49fd8633052f9cf983bb39f
[INFO] running `Command { std: "docker" "start" "-a" "a7e685adc824cba4c27e856626f4b26a8ea4e6d6f49fd8633052f9cf983bb39f", kill_on_drop: false }`
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling syn v2.0.110
[INFO] [stderr]    Compiling memchr v2.7.6
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling arrayvec v0.7.6
[INFO] [stderr]    Compiling graph_builder v0.3.1
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling dashmap v5.5.3
[INFO] [stderr]    Compiling num-format v0.4.4
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling atoi v2.0.0
[INFO] [stderr]    Compiling num-bigint v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.45
[INFO] [stderr]    Compiling linereader v0.4.0
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling memmap2 v0.5.10
[INFO] [stderr]    Compiling num_cpus v1.17.0
[INFO] [stderr]    Compiling page_size v0.4.2
[INFO] [stderr]    Compiling atomic v0.5.3
[INFO] [stderr]    Compiling byte-slice-cast v1.2.3
[INFO] [stderr]    Compiling fast-float v0.2.0
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling fid-rs v0.1.1
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling louds-rs v0.4.0
[INFO] [stderr]    Compiling trie-rs v0.1.1
[INFO] [stderr]    Compiling curieosa v0.1.0
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling num v0.4.3
[INFO] [stderr]    Compiling delegate v0.8.0
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling obographs-dev v0.2.2
[INFO] [stderr]    Compiling ontolius v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 27.30s
[INFO] running `Command { std: "docker" "inspect" "a7e685adc824cba4c27e856626f4b26a8ea4e6d6f49fd8633052f9cf983bb39f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a7e685adc824cba4c27e856626f4b26a8ea4e6d6f49fd8633052f9cf983bb39f", kill_on_drop: false }`
[INFO] [stdout] a7e685adc824cba4c27e856626f4b26a8ea4e6d6f49fd8633052f9cf983bb39f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 56f9130db5cbea4609732befaa6e0db5cf4bd611cb0f4ea602107c07234ec3ed
[INFO] running `Command { std: "docker" "start" "-a" "56f9130db5cbea4609732befaa6e0db5cf4bd611cb0f4ea602107c07234ec3ed", kill_on_drop: false }`
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling syn v2.0.110
[INFO] [stderr]    Compiling zerocopy v0.8.27
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling clap_lex v0.7.6
[INFO] [stderr]    Compiling ciborium-io v0.2.2
[INFO] [stderr]    Compiling anstyle v1.0.13
[INFO] [stderr]    Compiling regex-automata v0.4.13
[INFO] [stderr]    Compiling simd-adler32 v0.3.7
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling clap_builder v4.5.51
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-bigint v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.45
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling atoi v2.0.0
[INFO] [stderr]    Compiling plotters v0.3.7
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling regex v1.12.2
[INFO] [stderr]    Compiling num v0.4.3
[INFO] [stderr]    Compiling criterion-plot v0.5.0
[INFO] [stderr]    Compiling clap v4.5.51
[INFO] [stderr]    Compiling oorandom v11.1.5
[INFO] [stderr]    Compiling anes v0.1.6
[INFO] [stderr]    Compiling fid-rs v0.1.1
[INFO] [stderr]    Compiling flate2 v1.1.5
[INFO] [stderr]    Compiling louds-rs v0.4.0
[INFO] [stderr]    Compiling trie-rs v0.1.1
[INFO] [stderr]    Compiling curieosa v0.1.0
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling zerocopy-derive v0.8.27
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling graph_builder v0.3.1
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling obographs-dev v0.2.2
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling half v2.7.1
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling ontolius v0.7.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling criterion v0.5.1
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 45.63s
[INFO] running `Command { std: "docker" "inspect" "56f9130db5cbea4609732befaa6e0db5cf4bd611cb0f4ea602107c07234ec3ed", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "56f9130db5cbea4609732befaa6e0db5cf4bd611cb0f4ea602107c07234ec3ed", kill_on_drop: false }`
[INFO] [stdout] 56f9130db5cbea4609732befaa6e0db5cf4bd611cb0f4ea602107c07234ec3ed
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] a0f16fbbf24af0733104fa5c807349cd243eaf39ac68e0cdbade5c428fbe7e89
[INFO] running `Command { std: "docker" "start" "-a" "a0f16fbbf24af0733104fa5c807349cd243eaf39ac68e0cdbade5c428fbe7e89", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/ontolius-65a5a0cf691b3e7f)
[INFO] [stdout] running 18 tests
[INFO] [stdout] test io::obographs::test_obographs::test_parse_synonym_type ... ok
[INFO] [stdout] test io::obographs::test_obographs::test_parse_synonym_type_no_good ... ok
[INFO] [stdout] test term_id::test_comparison_and_ordering::random ... ok
[INFO] [stdout] test term_id::test_creation::test_term_id_from_curie ... ok
[INFO] [stdout] test term_id::test_comparison_and_ordering::known_vs_random ... ok
[INFO] [stdout] test term_id::test_creation::test_term_id_from_tuple ... ok
[INFO] [stdout] test term_id::test_equalities::test_partial_eq_to_str_tuple ... ok
[INFO] [stdout] test term_id::test_known_prefix::display ... ok
[INFO] [stdout] test term_id::test_known_prefix::partial_eq ... ok
[INFO] [stdout] test term_id::test_comparison_and_ordering::known_other_prefixes ... ok
[INFO] [stdout] test term_id::test_known_prefix::partial_eq_with_str ... ok
[INFO] [stdout] test term_id::test_comparison_and_ordering::known ... ok
[INFO] [stdout] test term_id::test_prefix::display ... ok
[INFO] [stdout] test term_id::test_prefix::partial_eq ... ok
[INFO] [stdout] test term_id::test_prefix::partial_eq_with_str ... ok
[INFO] [stdout] test term_id::test_sizes::test_size_of_inner_term_id ... ok
[INFO] [stdout] test term_id::test_term_id_err::term_id_err_can_be_converted_into_anyhow_error ... ok
[INFO] [stdout] test ontology::csr::beta::test_csr_ontology::test_debug ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 18 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/test_common.rs (/opt/rustwide/target/debug/deps/test_common-d8689c0d70575cd2)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test go_commons_are_accessible ... ok
[INFO] [stderr]      Running tests/test_io.rs (/opt/rustwide/target/debug/deps/test_io-6a2933516faaad0c)
[INFO] [stdout] test hpo_commons_are_accessible ... ok
[INFO] [stdout] test maxo_commons_are_accessible ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 16 tests
[INFO] [stdout] test human_phenotype_ontology::load_full_data ... ignored, just for interactive debugging
[INFO] [stdout] test gene_ontology::version_is_parsed ... ok
[INFO] [stdout] test gene_ontology::we_get_expected_descendant_counts_for_go_subroots ... ok
[INFO] [stdout] test gene_ontology::iter_ancestor_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_descendant_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_term_and_descendant_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_term_and_child_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_parent_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_term_and_ancestor_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_child_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_ancestor_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::test_iter_term_and_parent_ids ... ok
[INFO] [stdout] test human_phenotype_ontology::version_is_parsed ... ok
[INFO] [stdout] test medical_action_ontology::we_get_expected_descendant_counts_for_maxo_root ... ok
[INFO] [stdout] test medical_action_ontology::iter_ancestor_ids ... ok
[INFO] [stdout] test medical_action_ontology::version_is_not_parsed_from_the_toy_file - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 15 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 22.95s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests ontolius
[INFO] [stdout] 
[INFO] [stdout] running 19 tests
[INFO] [stdout] test src/term_id.rs - term_id::&'_TermId (line 147) ... ok
[INFO] [stdout] test src/io/obographs.rs - io::obographs::OntologyLoaderBuilder<Uninitialized>::obographs_parser (line 416) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::Prefix (line 241) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::Identified (line 14) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::Prefix (line 250) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 112) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::Prefix (line 265) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 166) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 178) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 188) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 50) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 33) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId (line 93) ... ok
[INFO] [stdout] test src/term_id.rs - term_id::TermId::prefix (line 216) ... ok
[INFO] [stdout] test src/lib.rs - (line 62) ... ok
[INFO] [stdout] test src/lib.rs - (line 19) ... ok
[INFO] [stdout] test src/lib.rs - (line 128) ... ok
[INFO] [stdout] test src/lib.rs - (line 91) ... ok
[INFO] [stdout] test src/ontology/mod.rs - ontology::csr (line 10) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 19 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 10.10s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a0f16fbbf24af0733104fa5c807349cd243eaf39ac68e0cdbade5c428fbe7e89", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a0f16fbbf24af0733104fa5c807349cd243eaf39ac68e0cdbade5c428fbe7e89", kill_on_drop: false }`
[INFO] [stdout] a0f16fbbf24af0733104fa5c807349cd243eaf39ac68e0cdbade5c428fbe7e89