[INFO] fetching crate sequintools 0.9.2...
[INFO] testing sequintools-0.9.2 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-8
[INFO] extracting crate sequintools 0.9.2 into /workspace/builds/worker-1-tc1/source
[INFO] removed /workspace/builds/worker-1-tc1/source/rust-toolchain.toml
[INFO] started tweaking crates.io crate sequintools 0.9.2
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate sequintools 0.9.2
[INFO] tweaked toml for crates.io crate sequintools 0.9.2 written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate sequintools 0.9.2 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate sequintools 0.9.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded libloading v0.8.5
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded rust-htslib v0.50.0
[INFO] [stderr]   Downloaded md5 v0.8.0
[INFO] [stderr]   Downloaded proc-macro2 v1.0.89
[INFO] [stderr]   Downloaded bio-types v1.0.0
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded cc v1.1.18
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded csv-core v0.1.11
[INFO] [stderr]   Downloaded syn v2.0.87
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded regex-automata v0.3.3
[INFO] [stderr]   Downloaded openssl-sys v0.9.90
[INFO] [stderr]   Downloaded rustix v1.0.1
[INFO] [stderr]   Downloaded derive-new v0.7.0
[INFO] [stderr]   Downloaded libz-sys v1.1.20
[INFO] [stderr]   Downloaded linux-raw-sys v0.9.2
[INFO] [stderr]   Downloaded curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v111.26.0+1.1.1u
[INFO] [stderr]   Downloaded bindgen v0.69.4
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a222de3051fa3263b75ff06bf8b227ad077876585de28fd00b8a08dbd6927785
[INFO] running `Command { std: "docker" "start" "-a" "a222de3051fa3263b75ff06bf8b227ad077876585de28fd00b8a08dbd6927785", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a222de3051fa3263b75ff06bf8b227ad077876585de28fd00b8a08dbd6927785", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a222de3051fa3263b75ff06bf8b227ad077876585de28fd00b8a08dbd6927785", kill_on_drop: false }`
[INFO] [stdout] a222de3051fa3263b75ff06bf8b227ad077876585de28fd00b8a08dbd6927785
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1d2d9bdb7433001f9521afb11805de61d5872575c32fe55f910b51cdad1c2964
[INFO] running `Command { std: "docker" "start" "-a" "1d2d9bdb7433001f9521afb11805de61d5872575c32fe55f910b51cdad1c2964", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.89
[INFO] [stderr]    Compiling unicode-ident v1.0.11
[INFO] [stderr]    Compiling libc v0.2.169
[INFO] [stderr]    Compiling pkg-config v0.3.27
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling regex-syntax v0.7.4
[INFO] [stderr]    Compiling libloading v0.8.5
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling bindgen v0.69.4
[INFO] [stderr]    Compiling getrandom v0.3.1
[INFO] [stderr]    Compiling zerocopy v0.8.14
[INFO] [stderr]    Compiling bitflags v2.4.0
[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling aho-corasick v1.0.2
[INFO] [stderr]    Compiling thiserror v1.0.44
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling anstyle-parse v0.2.1
[INFO] [stderr]    Compiling serde v1.0.185
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling thiserror v2.0.17
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling anstyle-query v1.0.0
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling anstream v0.6.18
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling sequintools v0.9.2 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling ryu v1.0.18
[INFO] [stderr]    Compiling clap_builder v4.5.48
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling rayon v1.11.0
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]    Compiling syn v2.0.87
[INFO] [stderr]    Compiling cc v1.1.18
[INFO] [stderr]    Compiling regex-automata v0.3.3
[INFO] [stderr]    Compiling rand_core v0.9.0
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling rand_pcg v0.9.0
[INFO] [stderr]    Compiling openssl-src v111.26.0+1.1.1u
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling csv v1.3.1
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling openssl-sys v0.9.90
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling rand v0.9.2
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]    Compiling regex v1.9.1
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling strum_macros v0.24.3
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.1
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.44
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.0
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling clap_derive v4.5.47
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling yoke v0.8.0
[INFO] [stderr]    Compiling bio-types v1.0.0
[INFO] [stderr]    Compiling zerovec v0.11.2
[INFO] [stderr]    Compiling zerotrie v0.2.2
[INFO] [stderr]    Compiling clap v4.5.48
[INFO] [stderr]    Compiling tinystr v0.8.1
[INFO] [stderr]    Compiling potential_utf v0.1.2
[INFO] [stderr]    Compiling icu_collections v2.0.0
[INFO] [stderr]    Compiling icu_locale_core v2.0.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling icu_provider v2.0.0
[INFO] [stderr]    Compiling icu_normalizer v2.0.0
[INFO] [stderr]    Compiling icu_properties v2.0.1
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling idna v1.0.3
[INFO] [stderr]    Compiling url v2.5.4
[INFO] [stderr]    Compiling rust-htslib v0.50.0
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 37s
[INFO] running `Command { std: "docker" "inspect" "1d2d9bdb7433001f9521afb11805de61d5872575c32fe55f910b51cdad1c2964", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1d2d9bdb7433001f9521afb11805de61d5872575c32fe55f910b51cdad1c2964", kill_on_drop: false }`
[INFO] [stdout] 1d2d9bdb7433001f9521afb11805de61d5872575c32fe55f910b51cdad1c2964
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8ffc43a65e5fab304d7912da03c8d4d11a284cc90119b84e7bb212e3bae668e6
[INFO] running `Command { std: "docker" "start" "-a" "8ffc43a65e5fab304d7912da03c8d4d11a284cc90119b84e7bb212e3bae668e6", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustix v1.0.1
[INFO] [stderr]    Compiling linux-raw-sys v0.9.2
[INFO] [stderr]    Compiling bitflags v2.4.0
[INFO] [stderr]    Compiling once_cell v1.20.2
[INFO] [stderr]    Compiling md5 v0.8.0
[INFO] [stderr]    Compiling tempfile v3.23.0
[INFO] [stderr]    Compiling sequintools v0.9.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 5.92s
[INFO] running `Command { std: "docker" "inspect" "8ffc43a65e5fab304d7912da03c8d4d11a284cc90119b84e7bb212e3bae668e6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8ffc43a65e5fab304d7912da03c8d4d11a284cc90119b84e7bb212e3bae668e6", kill_on_drop: false }`
[INFO] [stdout] 8ffc43a65e5fab304d7912da03c8d4d11a284cc90119b84e7bb212e3bae668e6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 1652879633e1d68df980503ffaf15443fb6ec4b4deb679865ac56c6b05caa20d
[INFO] running `Command { std: "docker" "start" "-a" "1652879633e1d68df980503ffaf15443fb6ec4b4deb679865ac56c6b05caa20d", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/sequintools-90d03c647be1bcab)
[INFO] [stdout] 
[INFO] [stdout] running 68 tests
[INFO] [stderr] [E::hts_open_format] Failed to open file "nonexistent/path.bam" : No such file or directory
[INFO] [stdout] test bam::tests::test_bam_reader_trait_methods ... ok
[INFO] [stdout] test bam::tests::test_example_function_with_mock ... ok
[INFO] [stdout] test bam::tests::test_example_function_with_mock_writer ... ok
[INFO] [stdout] test bam::tests::test_bam_writer_trait_methods ... ok
[INFO] [stdout] test bam::tests::test_htslib_bam_reader_creation_non_existant ... ok
[INFO] [stdout] test bam::tests::test_htslib_bam_writer_creation_non_existant ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_empty_header_records ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_basic ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_iterator_behavior ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_header_access ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_methods_dont_error ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_multiple_iterations ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_reader_with_custom_header ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_writer_basic ... ok
[INFO] [stderr] [E::hts_open_format] Failed to open file "output.bam" : Read-only file system
[INFO] [stdout] test bam::tests::test_mock_bam_reader_with_records ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_writer_clear ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_writer_methods_dont_error ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_writer_default ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_by_sample_profile ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_regions ... ok
[INFO] [stdout] test calibration::tests::test_choose_from ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_sample_profile_mode ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_by_fixed_coverage ... ok
[INFO] [stdout] test bam::tests::test_mock_bam_writer_multiple_writes ... ok
[INFO] [stdout] test calibration::tests::test_choose_from_sample_too_large ... ok
[INFO] [stdout] test calibration::tests::test_clip_regions ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_empty_target_regions ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_fixed_coverage_mode ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_regions_missing_sample ... ok
[INFO] [stdout] test calibration::tests::test_choose_from_zero_sample ... ok
[INFO] [stdout] test calibration::tests::test_copy_unmapped_reads ... ok
[INFO] [stdout] test calibration::tests::test_copy_uncalibrated_contigs ... ok
[INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_zero_coverage ... ok
[INFO] [stdout] test calibration::tests::test_records_that_start_in_region_empty ... ok
[INFO] [stdout] test calibration::tests::test_regions_coverage ... ok
[INFO] [stdout] test calibration::tests::test_regions_coverage_empty_regions ... ok
[INFO] [stdout] test calibration::tests::test_copy_uncalibrated_contigs_all_calibrated ... ok
[INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_with_sample_regions ... ok
[INFO] [stdout] test calibration::tests::test_records_that_start_in_region ... ok
[INFO] [stdout] test calibration::tests::test_calibrate_sample_mean_coverage_mode ... ok
[INFO] [stdout] test calibration::tests::test_clip_regions_zero_flank ... ok
[INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_fixed_coverage ... ok
[INFO] [stdout] test calibration::tests::test_determine_downsampling_probabilities_fixed_coverage_too_low ... ok
[INFO] [stdout] test calibration::tests::test_starts_in ... ok
[INFO] [stdout] test calibration::tests::test_starts_in_with_min_mapq ... ok
[INFO] [stdout] test calibration::tests::test_subsample ... ok
[INFO] [stdout] test calibration::tests::test_subsample_duplicate_read ... ok
[INFO] [stdout] test calibration::tests::test_window_starts ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_bigger_than_region ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_overflow ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_skip_reads ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_flank_underflow ... ok
[INFO] [stdout] test coverage::tests::test_write_csv_no_coverage ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_empty ... ok
[INFO] [stdout] test coverage::tests::test_write_csv ... ok
[INFO] [stdout] test region::tests::load_invalid_reader ... ok
[INFO] [stdout] test region::tests::load_with_bad_end ... ok
[INFO] [stdout] test coverage::tests::test_write_csv_with_thresholds ... ok
[INFO] [stdout] test region::tests::display_region ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region ... ok
[INFO] [stdout] test coverage::tests::test_coverage_for_region_missing_chrom ... ok
[INFO] [stdout] test region::tests::load_multi_lines_bed ... ok
[INFO] [stdout] test region::tests::load_bed_to_vec ... ok
[INFO] [stdout] test region::tests::load_without_name ... ok
[INFO] [stdout] test region::tests::load_with_bad_start ... ok
[INFO] [stdout] test coverage::tests::test_calculate_coverage ... ok
[INFO] [stdout] test bam::tests::test_htslib_bam_reader ... ok
[INFO] [stdout] test bam::tests::test_htslib_bam_writer_creation ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- bam::tests::test_htslib_bam_writer_creation stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'bam::tests::test_htslib_bam_writer_creation' (33) panicked at src/bam.rs:784:9:
[INFO] [stdout] assertion failed: result.is_ok()
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5697367a1282 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x5697367a1282 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x5697367a1282 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x5697367a1282 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::hde21067283f7e82e
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x5697367b249f - core::fmt::rt::Argument::fmt::he65307037dca33c6
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76
[INFO] [stdout]    5:     0x5697367b249f - core::fmt::write::h24186904251c31cb
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25
[INFO] [stdout]    6:     0x56973676e7a3 - std::io::default_write_fmt::h4e8d11c5c4b9cafe
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x56973676e7a3 - std::io::Write::write_fmt::ha849be0824d095ef
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13
[INFO] [stdout]    8:     0x56973677a4f2 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    9:     0x56973677f39f - std::panicking::default_hook::{{closure}}::h80a26d916c49679b
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27
[INFO] [stdout]   10:     0x56973677f231 - std::panicking::default_hook::he2e9efee79b3dce9
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9
[INFO] [stdout]   11:     0x569736428c0e - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h202f496763929329
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9
[INFO] [stdout]   12:     0x569736428c0e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x56973677fa5f - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h2883c9d2dbd4e81c
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9
[INFO] [stdout]   14:     0x56973677fa5f - std::panicking::panic_with_hook::hf5648b7cec6bc73e
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13
[INFO] [stdout]   15:     0x56973677f7d6 - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:700:13
[INFO] [stdout]   16:     0x56973677a639 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18
[INFO] [stdout]   17:     0x569736762e2d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5
[INFO] [stdout]   18:     0x5697367ba380 - core::panicking::panic_fmt::hb5d6b83773432920
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x5697367ba35c - core::panicking::panic::h1fe63ac7a400263b
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:150:5
[INFO] [stdout]   20:     0x5697364038ba - sequintools::bam::tests::test_htslib_bam_writer_creation::h39a473d1b466a4fe
[INFO] [stdout]                                at /opt/rustwide/workdir/src/bam.rs:784:9
[INFO] [stdout]   21:     0x569736403be7 - sequintools::bam::tests::test_htslib_bam_writer_creation::{{closure}}::hc523813c2cd464e4
[INFO] [stdout]                                at /opt/rustwide/workdir/src/bam.rs:780:41
[INFO] [stdout]   22:     0x5697363f2346 - core::ops::function::FnOnce::call_once::h77e072bffdcf34c1
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   23:     0x569736428a7b - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x569736428a7b - test::__rust_begin_short_backtrace::h85d4fe5033219107
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18
[INFO] [stdout]   25:     0x56973643ca6d - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74
[INFO] [stdout]   26:     0x56973643ca6d - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   27:     0x56973643ca6d - std::panicking::catch_unwind::do_call::hf71351b2657d4002
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40
[INFO] [stdout]   28:     0x56973643ca6d - std::panicking::catch_unwind::h7fcb5c0312d9e172
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19
[INFO] [stdout]   29:     0x56973643ca6d - std::panic::catch_unwind::h5cf3c9bdee894ebe
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14
[INFO] [stdout]   30:     0x56973643ca6d - test::run_test_in_process::h1469cb85193a3a25
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27
[INFO] [stdout]   31:     0x56973643ca6d - test::run_test::{{closure}}::h59d45b3cd6453d69
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43
[INFO] [stdout]   32:     0x569736415fb4 - test::run_test::{{closure}}::h9baa0c3d443f28c9
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41
[INFO] [stdout]   33:     0x569736415fb4 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18
[INFO] [stdout]   34:     0x56973641980a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17
[INFO] [stdout]   35:     0x56973641980a - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   36:     0x56973641980a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40
[INFO] [stdout]   37:     0x56973641980a - std::panicking::catch_unwind::h0efbf72006b8e365
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19
[INFO] [stdout]   38:     0x56973641980a - std::panic::catch_unwind::h3b081041e6c97066
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14
[INFO] [stdout]   39:     0x56973641980a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30
[INFO] [stdout]   40:     0x56973641980a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   41:     0x569736775a2f - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h3adbd6ccf5f737af
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9
[INFO] [stdout]   42:     0x569736775a2f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987
[INFO] [stdout]                                at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17
[INFO] [stdout]   43:     0x7ed7cdd82aa4 - <unknown>
[INFO] [stdout]   44:     0x7ed7cde0fa64 - clone
[INFO] [stdout]   45:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     bam::tests::test_htslib_bam_writer_creation
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 67 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.11s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "1652879633e1d68df980503ffaf15443fb6ec4b4deb679865ac56c6b05caa20d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1652879633e1d68df980503ffaf15443fb6ec4b4deb679865ac56c6b05caa20d", kill_on_drop: false }`
[INFO] [stdout] 1652879633e1d68df980503ffaf15443fb6ec4b4deb679865ac56c6b05caa20d
