[INFO] fetching crate omics-variation 0.2.0... [INFO] testing omics-variation-0.2.0 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-7 [INFO] extracting crate omics-variation 0.2.0 into /workspace/builds/worker-7-tc2/source [INFO] started tweaking crates.io crate omics-variation 0.2.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate omics-variation 0.2.0 [INFO] tweaked toml for crates.io crate omics-variation 0.2.0 written to /workspace/builds/worker-7-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate omics-variation 0.2.0 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate omics-variation 0.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b37ae1974e68468877f32019cfad5c4e8fea63973106c917abb1a6fcb8c2d2c8 [INFO] running `Command { std: "docker" "start" "-a" "b37ae1974e68468877f32019cfad5c4e8fea63973106c917abb1a6fcb8c2d2c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b37ae1974e68468877f32019cfad5c4e8fea63973106c917abb1a6fcb8c2d2c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b37ae1974e68468877f32019cfad5c4e8fea63973106c917abb1a6fcb8c2d2c8", kill_on_drop: false }` [INFO] [stdout] b37ae1974e68468877f32019cfad5c4e8fea63973106c917abb1a6fcb8c2d2c8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 92fae63b331358d38ef9ccbbb3ee6d88000b608d4fa6258ad3390637fb36b625 [INFO] running `Command { std: "docker" "start" "-a" "92fae63b331358d38ef9ccbbb3ee6d88000b608d4fa6258ad3390637fb36b625", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling omics-core v0.1.0 [INFO] [stderr] Compiling omics-molecule v0.1.0 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling omics-coordinate v0.2.0 [INFO] [stderr] Compiling omics-variation v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 5.19s [INFO] running `Command { std: "docker" "inspect" "92fae63b331358d38ef9ccbbb3ee6d88000b608d4fa6258ad3390637fb36b625", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "92fae63b331358d38ef9ccbbb3ee6d88000b608d4fa6258ad3390637fb36b625", kill_on_drop: false }` [INFO] [stdout] 92fae63b331358d38ef9ccbbb3ee6d88000b608d4fa6258ad3390637fb36b625 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 28b089b0d7e1264cfe65f928147a0025950a85859ac23aa73e68d3d7467ffa31 [INFO] running `Command { std: "docker" "start" "-a" "28b089b0d7e1264cfe65f928147a0025950a85859ac23aa73e68d3d7467ffa31", kill_on_drop: false }` [INFO] [stderr] Compiling anyhow v1.0.94 [INFO] [stderr] Compiling omics-variation v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.83s [INFO] running `Command { std: "docker" "inspect" "28b089b0d7e1264cfe65f928147a0025950a85859ac23aa73e68d3d7467ffa31", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "28b089b0d7e1264cfe65f928147a0025950a85859ac23aa73e68d3d7467ffa31", kill_on_drop: false }` [INFO] [stdout] 28b089b0d7e1264cfe65f928147a0025950a85859ac23aa73e68d3d7467ffa31 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7218f19c0346f90daa72b419eaf9c5318b9610f2cce7a97f89c41cff9796dbbc [INFO] running `Command { std: "docker" "start" "-a" "7218f19c0346f90daa72b419eaf9c5318b9610f2cce7a97f89c41cff9796dbbc", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.06s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_variation-7a393c8533b2b568) [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_empty_pair ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_dna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_dna_context ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_a_deletion ... ok [INFO] [stdout] test tests::it_serializes_correctly ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_insertion ... ok [INFO] [stdout] test snv::tests::it_fails_when_creating_a_variant_with_identical_nucleotides ... ok [INFO] [stdout] test tests::it_errors_when_attempting_to_parse_invalid_variants ... ok [INFO] [stdout] test tests::it_parses_dna_snvs_correctly ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_dna_context ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s [INFO] [stdout] [INFO] [stderr] Doc-tests omics_variation [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test src/snv.rs - snv::Variant::try_new (line 109) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::alternate (line 198) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::coordinate (line 149) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::reference (line 176) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.82s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "7218f19c0346f90daa72b419eaf9c5318b9610f2cce7a97f89c41cff9796dbbc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7218f19c0346f90daa72b419eaf9c5318b9610f2cce7a97f89c41cff9796dbbc", kill_on_drop: false }` [INFO] [stdout] 7218f19c0346f90daa72b419eaf9c5318b9610f2cce7a97f89c41cff9796dbbc